Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1806 ATGGAAGCTAGTACCGGACTTTTTGCAGCGTCTCACGATAACAATGATCTTGTGATCATTCAAGGACACGATGAGCCTAAGCCTGTGAAGAACTTAGATGGCCAGCTATGTGAAATATGTGGCGACTCAGTGGGACTTACTGTGGATGGAGACTTATTTGTGGCTTGTGAAGAATGTGGTTTCCCAGTTTGCAGGCCATGCTATGAGTATGAAAGGAGGGAAGGGACTCAAGTTTGCCCCCAGTGCCATACAAGATACAAGCGTATCAAAGGAAGCCCAAGAGTGGAGGGAGATGAAGATGAAGACGATGTGGATGATATTGAGCATGAATTCAAAATGGAAGATGAAAAGGAAAAGCTTAACAATGAAGCGATGATGAAAAGGAAGAAGAGCCGCGGTGATGATGATGAGAATGCTAAATCAGCATCGTTGCCCCAGGTCAATGGGGAGCTGCCAATATCATCTTACTGTACAGGAGATCCTGGCTATGCAAAATTTGATGACAAGGAGAGAACAGATGACTGGAAGTTGAAACAAGGAAATCTATGGCCTGAAACCGATGCCTCTGTTGATCCAGAAAAGGCTGCATTAGATGAAACCAGGCAGCCACTATCAAGGAAAGTAGCAATACCATCAGGAAGACTCAGTCCATATAGAATGATGGTTGCGGCTCGCCTCGTCGTTCTGTTACTCTTTTTTCAGTACAGAATCTTCCATCCAGTACCTGATGCTATTGGGCTCTGGTTCACATCTGTAGCGTGTGAGATCTGGCTTGCATTGTCATGGTTGGTTGATCAAATACCCAAATGGTTTCCCATCAATCGTGAGACTTACCTTGATCGTCTTTCAATAAGATTTGAACCGGAGGACAAGCCGAATATGCTTTCTCCAATAGATGTCTTTGTCACTACCGTGGATCCAATCAAGGAACCTCCTCTAGTTACAGCCAATACAGTTCTTTCAATCTTGGCCATGGATTACCCTGCTGAGAAAATCTCATGCTATGTTTCTGATGATGGGGCTTCCATGCTCACCTTTGAAGCTCTTCAAGAAACCGCTGAATTTGCAAGGAAGTGGGTACCTTTCTGCAAGAAATTCTCTGCCGAACCACGAGCACCAGAGAAGTACTTCTCTGAGAAAATAGATTATATCAAGGACAAGCTTCAGACTACATATGTTAAAGAACGTCGTACTATGAAGAGAGAATATGAAGAATTTAAGGTGAGGATCAATGCACTTGTGGCTAAAGCCATGAGAGTTCCTCCTGGTGGATGGACTATGAAAGATGAGACACCATGGCCAGGAAACAACACCAAAGATCATCCAAGTATGATACAGATCCTTCTTTCTCGCGGCGGAGGCCATGAAGGTAACCAACTTCCCTGCCTTGTCTACATGTCTCGTGAGAAAAGGCCTGCATTTCATCACCACAGCAAAGCTGGTGCAATTAATGCCTTGCTTCGTGTATCAGCAGTGCTAAGCAATGCTCCTTTCGTGCTGAACTTGGATTGCAATCATTATGTAAATAACAGCAAAACCGTGCGTGAGGCCATGTGTTTCTTTATGGACATACAACTTGGAAACAGCATTGGTTTTGTCCAGTTTCCTCTAAGATTTGACAGCCTCGATAGGAATGATCGTTATGCCAACAAAAACACTGTTTTATTTGATATTAACCTGAGGTGCCAAGATGGAATTCAAGGTCCCACTTATGTTGGTTCAGGATGTATCTTCAGGAGGAAAGCATTATACGGATTTGATCCTCCAAAGGCCTCGAAGCGCCCAAGAATTGGGCAGGTGCACTCAAAACAGGATGAAAATGGAGAGGACGCAAGCATAACAGATGAGGACAAGCAGCTGTTCAAATCACAGATGAATTTCGAAAATAAGTTTGGAAAATCTGAACTTTTTGTTAACTCTTCATTAACAGAAGAAGGTGGTGCTGATCCTTCTTCAGGTCAGGCAGCCCTGCTTAAAGAAGCCATTAATGTCATGAGCTGTCGTTATGAAGACAGAACTCTGTGGGGATACGAGGTTGGTTTGAGCTATGGATCTATAGCAGCAGATACTCTTACAAGTTTCAAGATGCATATTCGTGGTTGGAGATCTGTATACTGCATGCCAAAGAGAGCTGCATTCAGGGGCACAGCCCCTCTCAACCTTACAGATCGACTTAACCAGGTTCTTAGATGGGCAGTGGGATCACTTGAGATCCTATTCAGCCGCCATTGTCCGCTATGGTACGGCTTCAAGGAAGGAAAACTCAAGGGGCTCCAGAGAATTGCCTATATTAACAGCACTGTCTACCCCTTCAGCTCCATACCCCTTCTCATATATTGTCTCATTCCTGCCATCTGTTTGCTCACTGAAAAATTCATCACGCCTTCGGTTGGCACTTTTGCAAGTTTAATCTTCATCAGTTTGTTCATCTCAATCTTTGCGTCGTCCATTCTTGAATTGAGATGGAGTGGAGTCAGCCTCGAGGAATGGTGGAGAAACCAGCAATTCTGGGTCATTGGAAGCGTGTCTGCGCACCTCTTTGCCGTCGCTCACCGCCTCATGAAGGCCCTGCCCCTGGCTAGGTTCAATATAGACATGAACATTGTATCAAAGGCACCGGATGACGTCGAGTTTCGCGAACTCTACACCATTAAATGGACTGCACTTCTGATACCGCCAACCACTATCACAATAATCAACCTCATTGGCATTGTCGCTGGGTTCACTGATGCCTTAAACAGTGGTGAACATTCCTGGGGAGCATTGCTTGGGAAGCTCTTCTTTTCTTTGTGGGTTATTGTTCATCTTTACCCATTCCTTAAAGGTCTGATGGGAAGGCAAAACCGAACACCTACTCTTATAGTCATATGGTCCGTGCTTTTGGCTTCTATCTTCTCGTTGGTTTGGGTAAGAATTGACCCATTTGTGTTGAAAACAAAGGGACCAGACGTCAAGCAATGTGGAATCAGCTGCTGA 2976 0.4462 MEASTGLFAASHDNNDLVIIQGHDEPKPVKNLDGQLCEICGDSVGLTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCHTRYKRIKGSPRVEGDEDEDDVDDIEHEFKMEDEKEKLNNEAMMKRKKSRGDDDENAKSASLPQVNGELPISSYCTGDPGYAKFDDKERTDDWKLKQGNLWPETDASVDPEKAALDETRQPLSRKVAIPSGRLSPYRMMVAARLVVLLLFFQYRIFHPVPDAIGLWFTSVACEIWLALSWLVDQIPKWFPINRETYLDRLSIRFEPEDKPNMLSPIDVFVTTVDPIKEPPLVTANTVLSILAMDYPAEKISCYVSDDGASMLTFEALQETAEFARKWVPFCKKFSAEPRAPEKYFSEKIDYIKDKLQTTYVKERRTMKREYEEFKVRINALVAKAMRVPPGGWTMKDETPWPGNNTKDHPSMIQILLSRGGGHEGNQLPCLVYMSREKRPAFHHHSKAGAINALLRVSAVLSNAPFVLNLDCNHYVNNSKTVREAMCFFMDIQLGNSIGFVQFPLRFDSLDRNDRYANKNTVLFDINLRCQDGIQGPTYVGSGCIFRRKALYGFDPPKASKRPRIGQVHSKQDENGEDASITDEDKQLFKSQMNFENKFGKSELFVNSSLTEEGGADPSSGQAALLKEAINVMSCRYEDRTLWGYEVGLSYGSIAADTLTSFKMHIRGWRSVYCMPKRAAFRGTAPLNLTDRLNQVLRWAVGSLEILFSRHCPLWYGFKEGKLKGLQRIAYINSTVYPFSSIPLLIYCLIPAICLLTEKFITPSVGTFASLIFISLFISIFASSILELRWSGVSLEEWWRNQQFWVIGSVSAHLFAVAHRLMKALPLARFNIDMNIVSKAPDDVEFRELYTIKWTALLIPPTTITIINLIGIVAGFTDALNSGEHSWGALLGKLFFSLWVIVHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRIDPFVLKTKGPDVKQCGISC* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1806 991 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 287 393 IPR029044 -
Aev04g1806 991 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 449 591 IPR029044 -
Aev04g1806 991 MobiDBLite consensus disorder prediction 110 145 - -
Aev04g1806 991 MobiDBLite consensus disorder prediction 589 613 - -
Aev04g1806 991 MobiDBLite consensus disorder prediction 598 613 - -
Aev04g1806 991 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Aev04g1806 991 SUPERFAMILY Nucleotide-diphospho-sugar transferases 310 804 IPR029044 -
Aev04g1806 991 Pfam Cellulose synthase 604 985 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aev04g1806 991 Pfam Cellulose synthase 298 596 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aev04g1806 991 PANTHER CELLULOSE SYNTHASE 1 991 - -
Aev04g1806 991 CDD mRING-HC-C4C4_CesA_plant 35 85 - -
Aev04g1806 991 SUPERFAMILY RING/U-box 21 107 - -
Aev04g1806 991 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
Aev04g1806 991 Coils Coil 396 416 - -
Aev04g1806 991 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 991 - -
Aev04g1806 991 MobiDBLite consensus disorder prediction 110 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1806 Aev-Chr4 14238500 14244284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1806 1 991 Cell Wall Biosynthesis AT5G17420 65.664 0.0 1395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1806 K10999 - gmx:100777270 1660.58