Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1789 ATGAATCTTGGTTACAATCAAACCCACCAAGACAAATTCACTCATCCTGAAAACTTGAATAGTACTAAAGCAGAAACCCTAGGCGGCAGCAACAGCAGCACGACGCGGAGAAGCAGAGGTGAAACGACGCGTGAAAACTTCGAGGTCTTTGCGTCGCAGGCAAATGACGAAGAAGTAGCAGCAGCAGTGTTACAAACACCGAAAAAGCGCAGAACAAAGATGTGCCTCGATGGTGGTGGTGGTGGGTTTCAATGGATGGGGGTGAGAGGTTGCACAAGCCGTTTCCTTTCAATTTCTTGCATACCCATTTGGTTTTTGGTTCCCAAGAACCAAGTTGTTCTGTCCCTGTACTCTCTCTCCCTCTCTCCCTATTCTCTTTTAAGTTTTAGGGTTTTCTTGCTCCGTATCCCCTTTCAGCAGAAGAAGTGTGATGCAATGAAGCAATCTTTTGATACTTCATCATTAGGTCCTTCCAAGATTCCATCTATAAATATACCCAGAGGATCGGGGTACAATCCATGGGGGGTTTTATCTGGATCTGATTCCTACCATGCTTCATCTGATGCTAGTCTCTTTTCCAGCTCGCTGCCTGTTCTTCCACATGAAAAATTGAACTTAAATGATACTGAAAATGGTTATCAATCCGTCGATGACATCTCGTCTGGCTTTAAAAAGCTCCATAAAGATGTAGAGGGCAAGGATTCATTAGAAAATATTGCTGCTCATGCAATTGGAACCATGCTTCCTGATGATGAGGAGGAGCTTTTAGCTGGCATAATGGATGATTTTGATCTAAGTGGTCTACCAGGTTCTCTTGAAGACCTAGAAGATTATGATCTTTTTGGTAGTGGTGGAGGCATGGAACTTGAAACTGATCCACCGGAAAGTCTCAGCATGGGCATGTCTAAGTTAAACTTCTCTGATACTGTTGGCAACGGCTTGCCCCATTATTCTTTTCCTAATGGTGTGGGAACTGTTGCTGGAGAACATCCGTATGGAGAGCATCCTTCTCGAACATTATTTGTTCGAAATATTAACAGCAATGTGGATGATTCAGAGCTGAGAGCTCTTTTTGAGCAATACGGTGATATCAGAACCCTCTATACTGCATGTAAACATCGGGGGTTTGTAATGATATCCTATTATGACATCCGTGCTGCTCGAACAGCTATGCGGGCATTACAAAACAAACCTCTGAGGCGCAGGAAACTTGACATTCACTTCTCGATACCAAAGGATAATCCATCTGACAAGGATATCAACCAAGGAACGTTGGTAATTTTCAATTTGGATCCATCTGTTTCAAATGAAGACCTCCGTCAAATATTTGGGGCTTATGGAGAGGTCAAAGAGATAAGGGAAACTCCTCACAAGAGGCATCATAAGTTTATTGAATTTTATGATGTCAGAGCTGCAGAAGCAGCACTTAAATCATTAAATAGAAGTGACATAGCTGGTAAACGGATAAAGCTGGAACCTAGCCGACCTGGAGGAGCGCGCAGAAATTTGATGCTCCAACTAAATCAAGAGCTTGACCAAGATGAATCTCGGAGTTTCAGATATCAAGTGGGTTCACCTGTGGCCAACTCTCCTCCAGGTAATTGGATGCAGTTCAATAGCCCTGTTGACCAGAATTCAATGCAAACTCTCAGTCATTCTCCTGGTTCTCGGATCATGAGCCCAACAACTGGTAACAACTTACCAGGATTAGCTTCAATTTTACAACCTCAGGTATCAAACACTGTGAAGGCTGCAACTATTGCCAAGGACTTGGGAAGGAGCAGTCATGGAGAGCACATATTTACCAGCATGAATTCATCACATGGAACTACTTTCCAGTTGCATTCACTTCCAGAGCCAAAATTCAGCCAATATCGTGGAGCGTTGTCCTCATTGGGTCCATCAACATCCAATGGATCTTCAATCGAAACCTTGTCTGGGCCACAGTTTTTATGGGGAAGTCCAAGCCTGTACTCGGAGCATACCAAGCCTTCAGCTTGGCAGAGACCATCTGCGGTGCATCCATTTACATCGAACGGAAAGGGGCTTGCCTTCCCACACACAAGTCAGAATAGTTCCTATGTTGGTGCATCCCAGAATCATCACAATCATCATGTTGGATCTGCTCCATCGGGTTTGCCACTGGAGAGGCACTTTGGTTTCCTTCCTGAGTCTCCTGAAACTTCATTTATGAACAAAGTTGGCTATGGGGGCATGAGTTTGGGTCACAATGATGGAAATTACATGGTTAATGCAGGTGGATCTGTTAATTCTGGCATTACTATCCCAAGAAATATTTCTGATAGTGGTTCATCAAACCTGAGAATGAGATCTTCTCCTAGGCTTAGCCCTGTGTTTTTGGGTAATGGTCCTTATGCAGGACTGCTGCCTACCACCATGGAGAGTTTGACTGACCGTGCTTGGAGTAGATGGATAGAGAACAATGGGAACCAAGTTGACAGCAAGAAGCAATTTCACCTGGACTTGGACAAGATTAGAAGTGGTGAAGATACAAGGACTACATTAATGATAAAGAATATCCCAAATAAATACACCTCAAAAATGTTATTAGCTGCAATTGATGAAAATCACAGGGGCACATATGATTTTCTCTATCTGCCAATTGACTTTAAGAACAAATGCAATGTGGGATATGCATTTATCAACATGCTGTCACCCTCCCTTATCATTCCATTCTATGAGACTTTCAACGGGAAGAAATGGGAGAAGTTTAATAGTGAAAAGGTTGCTACTTTGGCTTATGCTCGAATCCAAGGGAAGGCTGCCCTTGTGAGCCACTTCCAAAATTCAAGTTTGATGAATGAAGACAAGCGCTGCCGCCCTATTCTCTTCCACTCTGAGGGTCCTGAATCTGGTGATCAGATCGCGCAAGAGCATCTTTCTTCCAACAATCTGAACATTCAGGCACCAAGGCCAAGTGAACTTTCAAGTTTTTCTCCTGGAAGCCCTCCGAAGGACGGACCTCCTGTAGCTGAACTTGATGATGTACACAAGATGGGACCAAAGGCTGAAGGGGTTTTGAGCAAATTGTCTCAAGTTTGCTCATCTTTTTGCTTTTGGTGGTTGCCACGTAGGATTGTTAGAGCTAGGTCATGTCCAGGGTATGCTCCACCAGACGATCGACTTAGACCATACTTGGAGAGGGCTGGTTTCTGGGAGGCGTCACAGATACGCCTGATTGATCAGGATTATGCATTGATTTCGGCCTTTGTGGAGAGGTGGAGACCAGAGACCCACACTTTCCAATCACCGACTCCACATCCTAGACCACAGCGTCAGGGCACCACTACTATAGTGAATTGGCTAAAGGAAGCTGTTTTACCACTACCACAGTTTCCGACCGAGGCTCAGCTTCTCTACTCCACCCGTGCTTACATTTTGATCATGATTGCGGGATTACTTTTGCCGGACACATCTGATTGTCGTGTGCATATGAGGTGGCTCCCATTGCTGAGGGATCTCGATGAGTGCGGTCAGTATAGTTGCGGTTCTGCCGTGCTCGACACACTGTACAGAGAGTGGCTAGGCTACGACCTGCGATTGCCATTGGCATCCGATTTCCACTCAGCAGGAGATGTGAGGGTTTATTTGTCCCTAGTGACATTTGACTGGTTGCCTTATGTTGACCAGCGCGTTACAAAGGTTCTGCCTGATTGGGTATTGCATGAGTGCGCTGTCTGGACATCGGTGACCAGTCTTATATGCTTTGCCTTTATCGAGTGGCATAGTGTTGACCGCGTCCTTAGACAGTTTGGTGCCGAGGCTAGGGTGTATCACTTTGTAGATCCGTTGCCTGCTGGTGCTATTCCACATGTTCCATCGGTCCCACTTCCTCCTCTTCCTGATCATTATCTATTTAGACGAGGCCGACGTGGAGGAGGACGTGGCGGGGGACGTAGAGGTGGTGGTGGTGGGGGGGGGGGGGGGGGACGTGGTCATGATGGTGATGATGATGGTGATGATGATGATGATGATGATGGAGCTGGTCATGATGATGATGTTCATGGTGGTGACGATGGAGGACATGGTGGCGGGACAGTATGGGATCAGTTTGGATGGGGTGGTGGAGGGGATGGGGCTGGAGGTTCTGGATGGCAACCATGGGGGAACACCAGGTCATATGGAGGTGGTACGACAGGATGCCGCCCATGGGAGGATACCAGGTCATACGGACGGGATACGACTGGTTGGCGTCCATGGGAGGACAATGGGTCATACAAAGGTTGTATGAGTAATAGGCACCGCGGGGGAGATGGAGATGGTAGCGCGTCAGGAGGGTATGTTGCTGAGGGCAGTGGTAGCGGTAGCGGATCATATTATCGGCCTCCTGTCCCAGAGATATCTTACTGGCAGAGCCTTGTTGCTGGTGACTATGGCTATTCCAGCCTGCAGCAGACATTTGATGGGTCAGACTATGTGATGAGCACGTCTGAGTTGGCGTTGTTGAGACGAGAGCTGGGTTTGATTGACCTTGACGATGCTAGTAGCTTGCAGATGGCAGCGACGAGCCCAGTGACCACACATGCTTTTGGGCGCTATGGAGGGACACCTCCATCAGCATTCCATGAGGACCAGTGA 4599 0.4675 MNLGYNQTHQDKFTHPENLNSTKAETLGGSNSSTTRRSRGETTRENFEVFASQANDEEVAAAVLQTPKKRRTKMCLDGGGGGFQWMGVRGCTSRFLSISCIPIWFLVPKNQVVLSLYSLSLSPYSLLSFRVFLLRIPFQQKKCDAMKQSFDTSSLGPSKIPSINIPRGSGYNPWGVLSGSDSYHASSDASLFSSSLPVLPHEKLNLNDTENGYQSVDDISSGFKKLHKDVEGKDSLENIAAHAIGTMLPDDEEELLAGIMDDFDLSGLPGSLEDLEDYDLFGSGGGMELETDPPESLSMGMSKLNFSDTVGNGLPHYSFPNGVGTVAGEHPYGEHPSRTLFVRNINSNVDDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDINQGTLVIFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELDQDESRSFRYQVGSPVANSPPGNWMQFNSPVDQNSMQTLSHSPGSRIMSPTTGNNLPGLASILQPQVSNTVKAATIAKDLGRSSHGEHIFTSMNSSHGTTFQLHSLPEPKFSQYRGALSSLGPSTSNGSSIETLSGPQFLWGSPSLYSEHTKPSAWQRPSAVHPFTSNGKGLAFPHTSQNSSYVGASQNHHNHHVGSAPSGLPLERHFGFLPESPETSFMNKVGYGGMSLGHNDGNYMVNAGGSVNSGITIPRNISDSGSSNLRMRSSPRLSPVFLGNGPYAGLLPTTMESLTDRAWSRWIENNGNQVDSKKQFHLDLDKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMLSPSLIIPFYETFNGKKWEKFNSEKVATLAYARIQGKAALVSHFQNSSLMNEDKRCRPILFHSEGPESGDQIAQEHLSSNNLNIQAPRPSELSSFSPGSPPKDGPPVAELDDVHKMGPKAEGVLSKLSQVCSSFCFWWLPRRIVRARSCPGYAPPDDRLRPYLERAGFWEASQIRLIDQDYALISAFVERWRPETHTFQSPTPHPRPQRQGTTTIVNWLKEAVLPLPQFPTEAQLLYSTRAYILIMIAGLLLPDTSDCRVHMRWLPLLRDLDECGQYSCGSAVLDTLYREWLGYDLRLPLASDFHSAGDVRVYLSLVTFDWLPYVDQRVTKVLPDWVLHECAVWTSVTSLICFAFIEWHSVDRVLRQFGAEARVYHFVDPLPAGAIPHVPSVPLPPLPDHYLFRRGRRGGGRGGGRRGGGGGGGGGGRGHDGDDDGDDDDDDDGAGHDDDVHGGDDGGHGGGTVWDQFGWGGGGDGAGGSGWQPWGNTRSYGGGTTGCRPWEDTRSYGRDTTGWRPWEDNGSYKGCMSNRHRGGDGDGSASGGYVAEGSGSGSGSYYRPPVPEISYWQSLVAGDYGYSSLQQTFDGSDYVMSTSELALLRRELGLIDLDDASSLQMAATSPVTTHAFGRYGGTPPSAFHEDQ* 1533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1789 1532 MobiDBLite consensus disorder prediction 978 1002 - -
Aev04g1789 1532 PANTHER PROTEIN MEI2-LIKE 2 147 989 - -
Aev04g1789 1532 MobiDBLite consensus disorder prediction 1293 1394 - -
Aev04g1789 1532 CDD RRM2_MEI2_like 422 492 - -
Aev04g1789 1532 PANTHER RNA RECOGNITION MOTIF-CONTAINING 147 989 - -
Aev04g1789 1532 MobiDBLite consensus disorder prediction 1 37 - -
Aev04g1789 1532 MobiDBLite consensus disorder prediction 1 43 - -
Aev04g1789 1532 Pfam RNA recognition motif 2 839 935 IPR007201 -
Aev04g1789 1532 Gene3D - 327 421 IPR012677 -
Aev04g1789 1532 MobiDBLite consensus disorder prediction 1420 1445 - -
Aev04g1789 1532 SUPERFAMILY RNA-binding domain, RBD 335 498 IPR035979 GO:0003676
Aev04g1789 1532 SMART rrm1_1 424 492 IPR000504 GO:0003723
Aev04g1789 1532 SMART rrm1_1 841 917 IPR000504 GO:0003723
Aev04g1789 1532 SMART rrm1_1 339 407 IPR000504 GO:0003723
Aev04g1789 1532 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 340 404 IPR000504 GO:0003723
Aev04g1789 1532 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 425 490 IPR000504 GO:0003723
Aev04g1789 1532 SUPERFAMILY RNA-binding domain, RBD 841 926 IPR035979 GO:0003676
Aev04g1789 1532 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 423 496 IPR000504 GO:0003723
Aev04g1789 1532 Gene3D - 422 520 IPR012677 -
Aev04g1789 1532 CDD RRM1_MEI2_like 337 413 IPR034453 -
Aev04g1789 1532 CDD RRM3_MEI2_like 842 927 IPR034454 -
Aev04g1789 1532 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 338 411 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1789 Aev-Chr4 13998652 14016505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1789 333 531 Eukaryotic Initiation Factors Gene Family AT1G71770 25.561 1.07e-06 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1789 - - gmx:100787152 1481.46