Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1770 ATGAATCTGCAACTATATGTCCTCTTTCTTATCAAAGCTTTTGCAATTCATGTATTATGTTTTATATTTTGCATCATTCACCTATTGATTCAACAGGTTGTGGTATTCTTTTCAACATGTGATGCAGTAGATTTTCACTATTCACTGCTAAGTGAATTCCACTTCTCAAACCTTCGGCAAACAGAAGGGATCAGACAGATGTTCCTTGGATGCAAAACTTTTTGGTTGCATGGTAGTATGGAACAGGAGGACCGGAGAACCACTTTTCAGGCCTTTAAAACTGAGAAATCTGCTTTGCTTTTATCCACTGATGTCTCTGCTAGAGGCCTGGATTTTCCCAAGGTTCGATGCATCATACAATATGATTCACCTGGGGAAGCTACTGAATATGTGCACAGGGTTGGTAGAACGGCTCGCCTGGGTGAAAAAGGAGAGTCATTGTTATTTCTGCAACCTACTGAAATAGACTATTTACAGGATTTGGAGAAACATGGTGTCTCTCTAACAGAGTATCCTCTCCTCAAAGTGTTGGATAGTTTCCCGCTGCATGGACAAAAGAACCAGATAAAGAAATTTGTTTTCATTGACTTACATCCCTGGATCCTTTGTCTCCAAAAGGCACTCGAGTCCTTCATCACGTCCAAGCCTAAGATGGATGAACTTGCCAAGAGGGGATTTTGCTCTTGGGTTCGTGCATACATCGCCCATCGCGGCGAGCTAAAAAGAATATTTATGATCAAGAAACTTCATTTAGAGCACGTGGCGAAAAGCTTTGCCTTGAAACAACAACCTTCCTTAGTTGGACAGTCCTTCCAAAAACAAACTAAGTAG 831 0.4116 MNLQLYVLFLIKAFAIHVLCFIFCIIHLLIQQVVVFFSTCDAVDFHYSLLSEFHFSNLRQTEGIRQMFLGCKTFWLHGSMEQEDRRTTFQAFKTEKSALLLSTDVSARGLDFPKVRCIIQYDSPGEATEYVHRVGRTARLGEKGESLLFLQPTEIDYLQDLEKHGVSLTEYPLLKVLDSFPLHGQKNQIKKFVFIDLHPWILCLQKALESFITSKPKMDELAKRGFCSWVRAYIAHRGELKRIFMIKKLHLEHVAKSFALKQQPSLVGQSFQKQTK* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1770 276 SMART DUF4217_3 203 268 IPR025313 -
Aev04g1770 276 SMART helicmild6 58 141 IPR001650 -
Aev04g1770 276 CDD SF2_C_DEAD 4 150 - -
Aev04g1770 276 PANTHER ATP-DEPENDENT RNA HELICASE DDX31-RELATED 21 274 - -
Aev04g1770 276 Pfam Helicase conserved C-terminal domain 30 141 IPR001650 -
Aev04g1770 276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 177 IPR027417 -
Aev04g1770 276 Pfam Domain of unknown function (DUF4217) 205 265 IPR025313 -
Aev04g1770 276 Gene3D - 21 275 IPR027417 -
Aev04g1770 276 PANTHER RNA HELICASE 21 274 - -
Aev04g1770 276 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 24 188 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1770 Aev-Chr4 13643567 13652894 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1770 4 173 Eukaryotic Initiation Factors Gene Family AT3G19760 28.655 1.40e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1770 K14806 - gmx:100805157 431.024