Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1762 ATGAGGACGAATAAGAGCGACAAAGCCAATAAGCAAGTGATGGAAAACAAGAAGAATGAACAGAAGGATGTTGGCAATTCCTCCAATCATGAAACCAAAGCAAAAGACAATGTTTTTGCTTCTTGCTCCTTCTCCAGCCTTGGCCTTCACCCTAACTTATGCAATGAGCTTCATGAAAGATTGGGATTCGAAGTTCCAACCCTGGTGCAAGCTCAAGCCATTCCTGTTATTCTCTCTGGTCACCATGCACTCGTTAATGCTGCTACGGGCACGGGGAAGACAATTGCATATTTAGCTCCAATTATTCATCACTTACAGAACTATGATACTCGAATCCAGCGCTCTGATGGAACATTGGCGTTGGTTCTTGTACCAACGCGTGAGCTATGTTTGCAGGTTTATGAAATTCTTCAAAAGCTGTTGCATCGGTTCCATTGGATTGTTCCAGGGTACATTATGGGTGGTGAAAATAGATCAAAGGAGAAAGCCAGGCTACGCAAAGGCATATCAATTCTTATAGCGACTCCTGGGCGCCTTTTAGATCACTTGAAGAATACATCATCATTCGTGTACACAAATTTGCGCTGGATTATTTTTGATGAAGCTGATCGGATTTTGGAATTAGGATTTGGAAAAGATATACAGGAAATACTTGATCTTTTAGGTTCAAGAAAAACAGGACATGATAACCATGAAAATGCAGTTCCAAGAAACTCTAAAATTCAAAGACAGAATTTGCTTTTGTCTGCCACCTTAAATGAAAAAGTGAACCACCTTGCTAAAATGAGTCTAGACAATCATGTGATGATTGGTCTTGAAGGTAAAACAATAGAGCCAGTTTCAACAATTGAAAGCCTTGATAATTCAGAATCTGATGAAGACGATGAAGATAAGTATTCCAGTAAAATGCCGACAGTTGGGGATTATAAAGTCCCAACTCAGTTGATTCAGAGATACGTAAAAGTGCCTTGTGGTTCACGACTTTCTGTACTTCTTTCGATTCTAAAGCATCTTTTTGAAAGGGAAACTTCACAAAAGGTTGTGGTATTCTTTTCAACATGTGATGCAGTAGATTTTCACTATTCACTGCTAAGTGAATTCCACTTCTCAACCCTTCGGCAAACAGAAGAAGGGACCAGACAGATGTTCCTTGGATGCAAAACTTTTCGGTTGCATGGTAGTATGGAACAGGAGGACCGGAGAACCACTTTTCAGGCCTTTAAAACTGAGAAATCTACTTTGCTTTTATCCACTGATGTCTCTGCTAGAGGCCTGGATTTTCCCAAGGTTCGATGCATCATACAATATGATTCACCTGGGGAAGCTACTGAATATGTGCACAGGGTTGGTAGAACGGCTCGCCTGGGTGAAAAAGGAGAGTCATTGTTATTTCTGCAACCTGCTGAAATAGACTATTTACAGGACTTGGAGAAACATGGTGTCTCTCTAACAGAGTATCCTCTCCTCAAAGTGTTGGATAGTTTCCCGCTGCATGGACAAAAGAACCAGATAAAGAAGTCTGTTTTCATTGACTTACATCCCTGGATCCTTTGTCTCCAAAAGGCACTCGAGTCCTTCATCACGTCCAAGCCTAAGATGGATGAACTTGCCAAGAGGGGATTTTGCTCTTGGGTTCGTGCATACACCGCCCATCGCGGCGATCTAAAAAGAATATTTATGATCAAGAAACTTCATTTAGGGCACGTGGCGAAAAGCTTTGCCTTGAAACAACAACCTTCCTTAGTTGGACAGTCCTTCCAAAAACAAACTAAGAAGAGGAAGAGATTTGAGAAGAAAACTGGTTTGTCGAGAAAGAGAAATGTTGCTAGTTCTAAGAAGAGAAAAGTTGCCAGTGTGACGTAA 1863 0.4117 MRTNKSDKANKQVMENKKNEQKDVGNSSNHETKAKDNVFASCSFSSLGLHPNLCNELHERLGFEVPTLVQAQAIPVILSGHHALVNAATGTGKTIAYLAPIIHHLQNYDTRIQRSDGTLALVLVPTRELCLQVYEILQKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKDIQEILDLLGSRKTGHDNHENAVPRNSKIQRQNLLLSATLNEKVNHLAKMSLDNHVMIGLEGKTIEPVSTIESLDNSESDEDDEDKYSSKMPTVGDYKVPTQLIQRYVKVPCGSRLSVLLSILKHLFERETSQKVVVFFSTCDAVDFHYSLLSEFHFSTLRQTEEGTRQMFLGCKTFRLHGSMEQEDRRTTFQAFKTEKSTLLLSTDVSARGLDFPKVRCIIQYDSPGEATEYVHRVGRTARLGEKGESLLFLQPAEIDYLQDLEKHGVSLTEYPLLKVLDSFPLHGQKNQIKKSVFIDLHPWILCLQKALESFITSKPKMDELAKRGFCSWVRAYTAHRGDLKRIFMIKKLHLGHVAKSFALKQQPSLVGQSFQKQTKKRKRFEKKTGLSRKRNVASSKKRKVASVT* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1762 620 MobiDBLite consensus disorder prediction 588 612 - -
Aev04g1762 620 MobiDBLite consensus disorder prediction 1 30 - -
Aev04g1762 620 Pfam DEAD/DEAH box helicase 68 258 IPR011545 GO:0003676|GO:0005524
Aev04g1762 620 MobiDBLite consensus disorder prediction 584 620 - -
Aev04g1762 620 SMART ultradead3 62 286 IPR014001 -
Aev04g1762 620 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 198 206 IPR000629 -
Aev04g1762 620 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 74 270 IPR014001 -
Aev04g1762 620 CDD SF2_C_DEAD 315 465 - -
Aev04g1762 620 Gene3D - 324 609 IPR027417 -
Aev04g1762 620 CDD DEADc_DDX31 57 271 - -
Aev04g1762 620 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 334 503 IPR001650 -
Aev04g1762 620 PANTHER RNA HELICASE 25 608 - -
Aev04g1762 620 SMART DUF4217_3 518 583 IPR025313 -
Aev04g1762 620 Gene3D - 4 273 IPR027417 -
Aev04g1762 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 477 IPR027417 -
Aev04g1762 620 MobiDBLite consensus disorder prediction 1 31 - -
Aev04g1762 620 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 42 71 IPR014014 GO:0003724
Aev04g1762 620 Pfam Domain of unknown function (DUF4217) 520 580 IPR025313 -
Aev04g1762 620 MobiDBLite consensus disorder prediction 282 304 - -
Aev04g1762 620 PANTHER ATP-DEPENDENT RNA HELICASE DDX31-RELATED 25 608 - -
Aev04g1762 620 SMART helicmild6 373 456 IPR001650 -
Aev04g1762 620 Pfam Helicase conserved C-terminal domain 333 456 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1762 Aev-Chr4 13578865 13584743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1762 23 487 Eukaryotic Initiation Factors Gene Family AT5G11200 28.773 1.59e-33 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1762 K14806 - gmx:100805157 971.459