Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1744 ATGTTCTTTAGGATGATGAATAGAGCATCTTCTCATAGTCTTTCTCTTGTTAATGTTGGAATGATGAGAACACAAGAATTAGTGATAACCCTTTTGCTAATAGGATATGCAATGACAAGGGTCAGCATGTCAAAGGCAGAGCATGCTCAATATGATTGCATTCATACCAGATATCCTAATCTTTGTGCTAAAACCTTGATGGGATTGAGTTCAGAGAATCAAAATGTTAATGCCATTTTGACTCTTGTTAACAAAACCATATTTGAAACCAACTTGCCAACTTCATATTTTGCTTCATTGGAGACCGTTCAGGATGCACCACAAGCCGCCTCTATTGCAGTTTACTGTGAAGAGCTAATGGGCATGTCACTGAAGAGGCTTGACCAATCCCTGAAAGCACTAAAATCAGCTCCAATAAGAAACAAGCACAACATCCAAACATGGCTAAGTGCTTCTCTAACTTTCCAACAAACTTGCAAAGACTACGCACATGCACACTACTACACCTCTTCTTCTAAACTCTCTTCATCATCATCGTCTAGTGATAATAATAATAATAGCCTCATGGTTTTGGAAAAGATGTCTAAGAAAATGGACTATCTCTCTCAATTGGGAAGCAACTCATTATCCCTTGTTAACCGAATCACCAGCCAAAAACGTGAAAGTGATGATGAAATTCCGAAATGGGTATCAGCAAAAGGGAGAAAATTGCTTCAGGGAGGTAGCAATAGCATAAATGCAAATGCTGTTGTTGCACAGGATGGTTCAGGAGACTATAGAACAGTTTCTGAGGCAATTAAGGCAGCTTCAGGGAAAAGTAGGTTTGTGATTCATGTAAAAGAAGGGGTTTATAAGGAGAAGATAAGGAGTAATAAGGATGGTATCACTTTGATTGGAGATGGTAAATATTCTACTGTCATTGTTGGGGATGATAGCTGTGCTAAGGGAACTAGCATGCCTGACACCGCCACATTCACAATCACAGGTGATGGATTCATGGCAAAAGATATTGGTTTCCATAACAACGCAGGTCCTCAAGGCGAACAAGCCTTGGCTCTAAACATTGCTTCCGACCGTTCAGTACTCTACAGATGCAGCTTCGCAGGTTACCAAGACACGCTCTACGCACACGCGCTACGCCAATTCTACAGAGAATGCGACATCTACGGCACCATCGACTTCATCTTCGGAAATGCAGCCGCAGTTTTTCAGAGTTGCAACTTAGTCCTCCGCCGCCCGCACGGCGGGGGCTACAATGCAATTCTAGCAAATGGAAGGACTGACCCGGGACAAAACACAGGGTTCTCTGTTCAAAAGTGCAGCATAACAGCAGGTTCGGATTTGTCTCCAGTGAAGCATTCTTATGAGTCGTTTCTTGGGAGGCCTTGGAAGGAGTACTCTAGGTCCGTGGTGATGGAGTCTACGATAGACGATGCTATTGGTGGTAGGGGTTGGATTGAGTGGCCTGGTTATGGAAGCTCAGTGTTGAAGACTCTGTATTTTGCAGAGTATGGTAATGAAGGAGCTGGTGCTGGAACGGCTAAGAGGGTTCAATGGCCTGGTTTTCATGTTATTGGAGCTCAAGAGGCTTCTAAGTTCACTGTTGCTACTTTTATTTCCGGAACTTCATGGCTTCCTTCAACTGGGGTCGCTTTCGTCTCTGGCCTTAATTAG 1674 0.4331 MFFRMMNRASSHSLSLVNVGMMRTQELVITLLLIGYAMTRVSMSKAEHAQYDCIHTRYPNLCAKTLMGLSSENQNVNAILTLVNKTIFETNLPTSYFASLETVQDAPQAASIAVYCEELMGMSLKRLDQSLKALKSAPIRNKHNIQTWLSASLTFQQTCKDYAHAHYYTSSSKLSSSSSSSDNNNNSLMVLEKMSKKMDYLSQLGSNSLSLVNRITSQKRESDDEIPKWVSAKGRKLLQGGSNSINANAVVAQDGSGDYRTVSEAIKAASGKSRFVIHVKEGVYKEKIRSNKDGITLIGDGKYSTVIVGDDSCAKGTSMPDTATFTITGDGFMAKDIGFHNNAGPQGEQALALNIASDRSVLYRCSFAGYQDTLYAHALRQFYRECDIYGTIDFIFGNAAAVFQSCNLVLRRPHGGGYNAILANGRTDPGQNTGFSVQKCSITAGSDLSPVKHSYESFLGRPWKEYSRSVVMESTIDDAIGGRGWIEWPGYGSSVLKTLYFAEYGNEGAGAGTAKRVQWPGFHVIGAQEASKFTVATFISGTSWLPSTGVAFVSGLN* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1744 557 SMART PMEI_2 45 211 IPR006501 GO:0004857
Aev04g1744 557 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 192 IPR035513 -
Aev04g1744 557 ProSitePatterns Pectinesterase signature 2. 388 397 IPR033131 -
Aev04g1744 557 Pfam Pectinesterase 248 541 IPR000070 GO:0030599|GO:0042545
Aev04g1744 557 SUPERFAMILY Pectin lyase-like 246 555 IPR011050 -
Aev04g1744 557 Gene3D - 242 556 IPR012334 -
Aev04g1744 557 PANTHER PECTINESTERASE 34 555 - -
Aev04g1744 557 Pfam Plant invertase/pectin methylesterase inhibitor 53 211 IPR006501 GO:0004857
Aev04g1744 557 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 216 IPR035513 -
Aev04g1744 557 TIGRFAM PME_inhib: pectinesterase inhibitor domain 30 162 IPR006501 GO:0004857
Aev04g1744 557 CDD PMEI-like_3 53 217 - -
Aev04g1744 557 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 54-RELATED 34 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1744 Aev-Chr4 13391012 13399148 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1744 116 556 Carbohydrate Esterase AT2G45220 45.928 1.41e-125 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1744 K01051 - gmx:100795439 756.133