Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1742 ATGGCTTCCTCATATCATAAACTCTTCTTCCTCCTTGTCCTTTCAATCTTCTCATTATCCTCTCAAACTTATGCTATTAACTCCTCCAATAATGCCACCACAACATTTCATGCAAATCTCTCTTCATTAAGATCTTTCTGCAGAATCACACCACACCCAGAAATTTGCTTCAATTCATTGAAGCTCTCAATCTCAATTAACATTAGTCCAAACATATTCACCTTCCTCCTTCAATCCCTCCAAGTTGCAATATCTGAAGCCACAAAGCTATCTACTCTGTTTCACAATGTTGGGCACTCATCAAACATCATAGAGAACCAAAGAGGAGCAATACAAGATTGCAAGGAGCTTCACCAATCAACATTAGCTTCTCTAAAGAAATCATTATCTGGGATTCGTTCATCAAACTCTAGGAGAAGAAACCTGGTTGATGCAAGAGCTTATCTCAGTGCAGCACTAACAAACAAGAACACATGTTTAGAAGGCCTAGACTCTGCTTCTGGTACCCTGAAGCCAGTTCTTGTGAATTCTGTTATCAACACTTACAAGCATGTGAGTAATTCCCTTTCAATGCTCTCTAAGCCAGGGATTAGTGGTCCTAAAGGCTCGAAGGAATGGCTATTTCAGAGTTCTGATGGGGATGAATATGACCCAAATGAGATGATTGTTGTGGCTATTGATGGAACTGGAAACTTTAGCAGCATAACTGATGCAATCAACTTTGCCCCAAATAACAGCTTGATTAGGACAGTGATCTATGTGAAGGAAGGGGTTTATGAGGAAAATGTTGAGATCCCAAGTTATAAGACCAACATTGTTATGCTTGGAGATGGGAGTGATGTCACTGTCATAACTGGTAATAGAAGTGTTGGTGATGGATGGACCACTTTCAGATCTGCAACACTAGCTGTCTTGGGTGATGGCTTCTTGGCACGTGACATATCGTTTGAGAACAGTGCAGGGCCAAAGAAGCACCAAGCAGTAGCCTTGCGAGTAAACGCCGACTTAACCGCTTTTTATAGGTGCGGCATTTATGGTTACCAAGACACACTCTACGCGCACTCGTTTAGACAATTCTACAGAGAGTGCGACATTTATGGTACCGTCGATTTCATATTTGGCAATGCAGCAATTGTTCTTCAAGAATGCAACATTGTGTCAAGAATGCCATTACCTGGCCAATTCACTGTGATAACTGCTCAATCCAGAGATAGCCCAGATGAGGACACTGGCATATCAATCCAAAACTGCTCAATTATAGCCACAAATGATCTTTATTCTAACTCTAGCAGCATCAAGAGTTACCTTGGTAGACCATGGCGGGTGTATGCTAGAGTTGTGTATATTGAGTCATACATTGATGAGTTTATTGACCCAATGGGTTGGGCAAAATGGTCTAATGATGAAGTGGGGTTGGATACTTTGTATTATGGAGAGTATGAGAATTATGGGCCTGGTTCAAGGACATATAATCGTGTGGAATGGGTTGGGTACCATGTGATGGGTTATAATGATGCATATAATTTCAGTGTTTCAGAATTCATTACTGGAGATGCTTGGCTTGGGTCTACTTCATTTCCTTATGATGATGGGATCTGA 1599 0.4115 MASSYHKLFFLLVLSIFSLSSQTYAINSSNNATTTFHANLSSLRSFCRITPHPEICFNSLKLSISINISPNIFTFLLQSLQVAISEATKLSTLFHNVGHSSNIIENQRGAIQDCKELHQSTLASLKKSLSGIRSSNSRRRNLVDARAYLSAALTNKNTCLEGLDSASGTLKPVLVNSVINTYKHVSNSLSMLSKPGISGPKGSKEWLFQSSDGDEYDPNEMIVVAIDGTGNFSSITDAINFAPNNSLIRTVIYVKEGVYEENVEIPSYKTNIVMLGDGSDVTVITGNRSVGDGWTTFRSATLAVLGDGFLARDISFENSAGPKKHQAVALRVNADLTAFYRCGIYGYQDTLYAHSFRQFYRECDIYGTVDFIFGNAAIVLQECNIVSRMPLPGQFTVITAQSRDSPDEDTGISIQNCSIIATNDLYSNSSSIKSYLGRPWRVYARVVYIESYIDEFIDPMGWAKWSNDEVGLDTLYYGEYENYGPGSRTYNRVEWVGYHVMGYNDAYNFSVSEFITGDAWLGSTSFPYDDGI* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1742 532 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 194 IPR035513 -
Aev04g1742 532 CDD PMEI-like_3 45 195 - -
Aev04g1742 532 Pfam Plant invertase/pectin methylesterase inhibitor 42 191 IPR006501 GO:0004857
Aev04g1742 532 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 193 IPR006501 GO:0004857
Aev04g1742 532 SUPERFAMILY Pectin lyase-like 219 529 IPR011050 -
Aev04g1742 532 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 194 IPR035513 -
Aev04g1742 532 ProSitePatterns Pectinesterase signature 2. 365 374 IPR033131 -
Aev04g1742 532 SMART PMEI_2 38 191 IPR006501 GO:0004857
Aev04g1742 532 Pfam Pectinesterase 222 518 IPR000070 GO:0030599|GO:0042545
Aev04g1742 532 Gene3D - 217 532 IPR012334 -
Aev04g1742 532 PANTHER PECTINESTERASE 12 531 - -
Aev04g1742 532 PANTHER PECTINESTERASE 12 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1742 Aev-Chr4 13369195 13371728 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1742 41 532 Carbohydrate Esterase AT2G26440 66.148 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1742 - - gmx:100776969 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1742 04 13369195 13371728 Aev04g1742 04 13369195 13371728 ECH