Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1740 ATGTCTCTTCTTTCTTCGTCAAGAAAACAACACTACCTGATGGCTCCAAAAACCACAACCACAATATTCAACTTCTTCTTCTTCTTATTATTATTATTACAGTCGGTGTTTATGTCCCACCAGTACACCCCAAGCCTCCTGAAGGTGCCTCCTTCTGAATTTACTGCCTCAGTGAGAGAAGCTATTGACGCTTTGCATGACGTTGCGTCAACACTAGAGTCAGATTTCTTCTTCAGCAGCAAAAATAACAACAACGGCTTTGTTGATTCTCGCCTCACCAGCGCCGTTTCCGCGTGCCTTGAATTGATGGAATTGTCGTTAGATGAGCTAAGCTGGGCCGTGTCCGCTATTGACAGTCCCAAACCCAAAGTTGCAGGAAAACATTACAGTACCGGGAACCTGAACTCTGATTTGAGGACATGGCTTAGTTCCGCACTTGCAAATACAGATACGTGCGTGGAAGGATTCGAAGGTACCACCATTGGGAATGTGAAGAAGGGTCTAATATCCAATTCCATTGAAAAAGTGAACTCATTGGTCCAGCAACTCCTAAAACAGGTCCACCCTGTTTCGGTCCATAATAATGACCTCATAAGCACCAAACAGAGTCATCAATTATTCCCTCCATGGGTTGAAGCAGAGGACCAATTGAGGAGAAGAAGGGTACGCGCGGATGCTGTTGTTGCTGCTGATGGGAGTGGGAATTACACTAGAGTGATGGATGCGGTGTTAGGAGCACCAGAGTATAGAATGAAGCGATATGTGATACACATAAGGAAGGGCGTTTATGAAGAGAACGTTGTGATTGGTAAGAAGAAGTGGTACCTTATGATGATTGGAGATGGAATGGATGCAACGGTTATCACTGGCAACTTGAGTTACGCTCAGAATATCACCACTTTCAAGACTGCAACTTTTGCTGTGAACGCAATGGGATTCATAGCAAGAGACATGTCCTTCCGGAACACTGCAGGGCCTGAGAATCACCAAGCAGTAGCACTAAGAACACATTCTGACCTCTCCGTCTTCTACCGCTGTGGCATCTTTGGTTACCAAGACAGCCTCTACGCCCACGCCTCCCGCCAATTCTACAGAGAATGCACAATCACCGGCACCGTCGACTTCATCTTCGGCCACGCCGACGCCGTGTTCCAGAACTGCACAATTCTAGCCAAGAAAGGATTACCAACACAGAAGAACACAATCACAGCTCAAGCTGGAAAAGACTCTGATGGCACACCCTCTGGTTTCTCAATCCAATTCTGCAACATTTCCGCAGATTTCGACCTCTTACCATCACTTAATTCCACCCAAACCTACCTTGGAAGACCCTGGAAGCCGTATTCCAGAACGGTTTTCATGCAATCTTACATAAGTGATGTGTTGATGCCAAAAGGGTGGCTAGCGTGGAATGATTCATTGTATTTGGACACATTGTATTTTGGTGAGTTCATGAATTATGGGCCTGGAGCTGGAGTAGCTAAGAGGGTGAAATGGTCAGGGTATCATGTGATGAATGATTCAAGCCAGGCTAGTAATTTCACTGTGTCGAATTTGATTCTTGGAGATATATGGTTGCCTTCAACGGGTGTGACTTTTAATCCTGGATTGTAG 1614 0.456 MSLLSSSRKQHYLMAPKTTTTIFNFFFFLLLLLQSVFMSHQYTPSLLKVPPSEFTASVREAIDALHDVASTLESDFFFSSKNNNNGFVDSRLTSAVSACLELMELSLDELSWAVSAIDSPKPKVAGKHYSTGNLNSDLRTWLSSALANTDTCVEGFEGTTIGNVKKGLISNSIEKVNSLVQQLLKQVHPVSVHNNDLISTKQSHQLFPPWVEAEDQLRRRRVRADAVVAADGSGNYTRVMDAVLGAPEYRMKRYVIHIRKGVYEENVVIGKKKWYLMMIGDGMDATVITGNLSYAQNITTFKTATFAVNAMGFIARDMSFRNTAGPENHQAVALRTHSDLSVFYRCGIFGYQDSLYAHASRQFYRECTITGTVDFIFGHADAVFQNCTILAKKGLPTQKNTITAQAGKDSDGTPSGFSIQFCNISADFDLLPSLNSTQTYLGRPWKPYSRTVFMQSYISDVLMPKGWLAWNDSLYLDTLYFGEFMNYGPGAGVAKRVKWSGYHVMNDSSQASNFTVSNLILGDIWLPSTGVTFNPGL* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1740 537 ProSitePatterns Pectinesterase signature 2. 369 378 IPR033131 -
Aev04g1740 537 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 189 IPR035513 -
Aev04g1740 537 SUPERFAMILY Pectin lyase-like 223 535 IPR011050 -
Aev04g1740 537 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 49 536 - -
Aev04g1740 537 PANTHER PECTINESTERASE 49 536 - -
Aev04g1740 537 Pfam Pectinesterase 225 523 IPR000070 GO:0030599|GO:0042545
Aev04g1740 537 Pfam Plant invertase/pectin methylesterase inhibitor 57 183 IPR006501 GO:0004857
Aev04g1740 537 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 50 177 IPR035513 -
Aev04g1740 537 Gene3D - 219 537 IPR012334 -
Aev04g1740 537 SMART PMEI_2 33 190 IPR006501 GO:0004857
Aev04g1740 537 CDD PMEI-like_4 39 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1740 Aev-Chr4 13349733 13355848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1740 26 537 Carbohydrate Esterase AT3G43270 53.019 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1740 K01051 - gmx:100798620 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2777 01 30306172 30309435 Aev04g1740 04 13349733 13355848 PCT