Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1636 ATGCATGGGCGTGCAGGTGAGGAGAGGAAAAGGAGGACACGGCACATGTTTGTGACCGCCGATGTTTCTTCTTCTTCGTCGTCGTCGCCACCAGCTAAGTATTTCTGCAAGGACGGTCGTGAAATTAGTGTTGGTGAATGTGCTCTCTTCAGACCATCTCAACATCGCCCACCTTTTGTTGGAATAATTCGTTGTTTGACTGTTGATAAAGAGAATAAATTGAAGTTAGGAGTTGATTGGCTTTATCGACCCATTGAAGTAAAACTTGGCAAGGGAGTGCTATTGGAGGCTGCTCCAAACGAAATTTTCTATTCCTTTCATAAGGATGAGATTGATGCTGAATCGCTTCTTCATCCTTGTAAAGTTGCATTTCTTCCTAAAGGCGCTGTACTTCCATCAGGGATTTCTTCATTTGTGTGTCGGAGGGTTTATGACATTGCAAACAAGTGTTTATGGTGGCTAAATGATCAAGATTATATTAATAATTGCCAAGAAGTAGTAGATCAACTATTAGACAAGACTCGTTTAGAAATGCATGCGACAGTGCAACCAGGCGGTCGATCTCCTAAGCAAATGAGTAGTCCAACATCAACATCACAGTTAAAATCTGGCTCAGATAGTGTCCAGAACAGTGCTTCTTCCTTTCCTTCTCACACTAAGAGCAGAAAAAGGGAGAGGGTAGATCAAGGCTCTGAGCCTGTGAAGCGAGAACGTTCATCAAAAAGTGAGGATGGGGATTCTGGTAATTTTAAGCACGATAGCTTCTTAAAGACAGAGATAGCCAGAATTACAGAAAAGGGAGCCCTTGTTGATACTGAAGGGGTTGAGAAATTAGTGCAGCTGATGGTTCCTGATAGAAATGAGAAGAAGATAGATTTAGCTAGCCGCTCATTGCTTGCAGCTGTTGTTGCAGCAACGGATAAAGATGATTGTCTCAATCAGTTTGTGCAGCTGAAGGGTTTGCCTGTACTTGATGAATGGCTACAAGAAGTCCATAAAGGGAAGATTGGTGATGGTATTGGGTCAAGGGATGGTGATAAATCTGTTGAGGAATTTCTCTTGATTTTACTCCGGGCTCTTGATAAGCTTCCAGTAAATCTTCAGGCTCTGCAGATGTGTAATATTGGTAAATCTGTGAATCATTTGCGAACCCATAAAAACTCTGAAATTCAGAGAAAAGCTAGGGGCTTAGTTGACACATGGAAGAAACGTGTTGAAGCTGAAATGAATATAAATGATGCAAAGTCTGGGTCTGGTCAGACTGTTCGCTGGTCTGCTGGACAACGAATTCCTGAAGTTTCTCAAGGTGGGAATAGGCATTCAGGTTCATCATCTGACGTTGCCATGAAGAGTTCAGTTACACAGATTTCTGCATCTAAATCTGCCTCTGCAAAGGTCGTCCAGGTAGAAAATACTGCTAGATCTGCATCTCCAGGGCCTGCAAAAGCAGTTTTGTCACCTGCATCTGCAACTACGAACTTAAAAGATGGGCAGCCCCGTGTTGCTGCCGTCAGTGGAGGCTCGGATCTTCCCATGGCAAATGCAAGGGATGAGAAAAGCAGCAGTTCTAGTCCATCTCACAACAATAGCAGTTCAAGTGACCATGCTAAAACTGGGGGTCTTTCTGGAAAGGAGGATGCCAGAAGCTCTACTGCAATGAGTGCAAATAAGGTATCAGGAGGCTCTTCTCGTCGACCAAAAGCTAATGGTTTCTCAGGTTCAGCTCCATCTGGAGGGCAAAGGGAAACTGGTTCCAGCAGAACTTCCAACTTGCACAAAAATTCAAATTCAGAAAAACTATCTCAATCTGGATTAATGGAAAAGGCTCTTGATGGAGCTTCTGTTGAGGGCAATACTCCCAAGCTGATTGTTAAAATTCCAAACCAAGGTATAAGTCCGACACGAAGTGCCAGTGCTGGTTCTTTTGATGATCCTACACTCATGAACAGTCGAGCTTCATCTCTTGTCCTTTCAGAGAAGCATGATCAGTTTGATCGTGGCTCAAAGGAGAAGAGTGATTTTTATCGTGCCAATATTAGCTCAGATGTTAATACTGAGTCTTGGCAGAGTAATGATTTCAAAGATGTATTGACTGGGTCTGATGAGGGTGATGGATCACCTGCTGCAGTTACTGATGAAGAGCGCTGTAGGACTGGTGATGATTGTAAAAAAACACTGGAGGCATCAAAAGCAGCTTCCTCATCATCTGGAAATGAAAACAAAGCTGTGAATATGCGAGATGCTGCGTACAGCTCCATAAATGCTTTAATTGAAGGTGTTAAGTACTCTGAAGCTGATGCTGTTGGAATGAATCTTCTTGCTAGCGTGGCTACTGGAGAAATCTCCAAATCTGAATTGTTGACACCAGCTGGATCCCCAGAAAGAAACACTACTACTGAACAGTCAAGCATGGGCAATGGTGTAGTCAAGTCCTCTGAAGAAAATGTTGTCCAGGGTGAATGTCTCTCAAACATTGGACTTGGTGAACATAAGAATTCAGGTTCTATATTAGGTGCATCAGGGAAAAATGATGATGATGGTTCTGATTTGCTGTCTTCTGGAGGTAAAGCTGCAAGAGAGCATGAGATGCGTGTTAGTTCATGTGGGATGGATTCGCTGCCTGTTACTGAACCTTGTTTAGAGGGTCAAGGAAAATTAAATGAAAAACCTGTTTCCACTACACCATCTGGCCTTCCTGAAAGTATCAAGCCAGAAGCCAGAGATGGTGATGGCAGCAAGCAGCCCCTGGAGGAGGTTGTAGGGGGAGTCAATGCAGGTGAAAACCGTGATGATAAGATCAGTGCTGCTGCAGGAGTTGGGATGGAGACAGTTGAAAAGCTGCCTTCTACCTCTGCAGAAGTTGATGTGAAGGGTGATAACTGTACTGCTGAGGGATTATCCAGTGGACAGACAACACAGAAGCCTCCTGCTATTCTTATGCAATCTGATTCTGTGAGAGTAACAGATGAGAATCTTCCACATCGTTCTGGTTGCAGTGTTGAAAAGGCTCCTGAAGATCTCAATGAACAGGAATGTACCAATGACATGGCAACTGAGAATCATGCTAGCCAGTCTAAGAAGCAACAAAATGAGTGTGAAAGTGACACCTTGGTGATGCCTGGGAGTAGAGGTTCTGTTGCTGAACACGTGGAAGAGAATTCAGGAACGAAAGAGCTGCATGACCAACCTGCTGGACAGGTACTCCACAAAGCTTTACCTAGCTTTCCATCACAAGAAATGGATAAGCATCTCGATTCTAAAGGATCAAAGTTGTCTGCTACGGAAGCAGAGGAAGCTGAGGAGTGCACCTCTACCACTGCAGACACTACTTCCATGTCTGCTGCTGTTGTGTCAGATGTGGATGCGAAAGTTGAATTTGATTTAAATGAAGGGTTCAATGCAGATGATGGTAAAAGTAGTGAGTTCAACAGCGTTGCCAGTTCTGGATGTGTGTCTTCTGTTCGATTGATTAGTCCCGTTCCTTTTCCAGCTTCATCTATGGCTAGTGGAATCCCCGCCTCAATTACTGTAGCTGCTCCTGCAAAGGGGCCCTTTGTGCCACCTGAAGATTTATTGAGAAGTAAAGGGGAGCTTGGTTGGAAGGGATCAGCCGCCACGAGTGCATTCCGGCCAGCTGAGCCCAGGAAAGTTATGGAAGTGTCGCTTGCTACCCCAACTACAGCAACTCCTGATGCTGCAGTTGGAAAGTCGAGTCGACCACCATTGGAATTTGACTTAAATGTGCCTGATGAAAGAATACTTGATGATATTTCTCTTGCAGCTGATGGCCGTGAACATGCATCCAATATAACTTCAGCTTCGCCTGTCCGTTGTTCTGGAGGGCTTGGTCTTGACTTGAACTTACTGGATGAAGCTTCTGACGTGGTGGGTAATTGCTCCACTAGCAATAGTCACAAAGTAGATGTGCCACTTATACAGGTGAAATCATCATCCACTGGTCCTGCAAAAGAAGTGAATGTCCAGAGGGACTTTGATTTGAACAACGGACCTTCGGTTGATGAAGTAACCACTGAACCATCAGCATTCCCTCTGCATGGCAGAAGCAGTCTGCCGTCTCAACCACCCATTTCTGGACTCAGGACGAGCAATGCAGATCTAGGGAACTTCTCTTCATGGTTTCCCTCGGCAGGAAACACTTACTCTGCTGTCACAATATCTTCAATTATGCCTGATAGAGGGGATCAACCCTTTTCAATCATTGGTCCAAATGGGTCGCAAAGGTTGTTGGGTTCTGCTACTGGTGGCAACCCATTTGGACATGATATTTACAGGGGCCCGGTATTGTCATCTTCTCCTGCAGTGTCTTATCCACCTGGTCCATTCGAGTATCCTGTCTTCCCTTTCAATTCCAGCTTTCCGCTTCCATCAGCATCGTTTTCTGCTGGATCGACTACTTACGTAGATTCAACATCGGGCAGCAGGATCTGCTTCCCTCCAGTAAATTCACAGTTAATGGGGCCTGCTGGCACTGTTTCATCACATTACCCCAGGCCTTTTGTTGTTAGCCTCCCAGATGGTAGCAATAGTGGCAGTGCTGAGACCAGCAGGAAGTGGGCAAGGCAAGGTTTAGATCTTAATGCAGGACCTGGAGTCTCAGACGTAGAGGGAGAGAAGAAGCTTCACATCTCCCACAAAGGCAACTTTCAGTTGCCAGTTCGCAGGCCGTAG 4689 0.4506 MHGRAGEERKRRTRHMFVTADVSSSSSSSPPAKYFCKDGREISVGECALFRPSQHRPPFVGIIRCLTVDKENKLKLGVDWLYRPIEVKLGKGVLLEAAPNEIFYSFHKDEIDAESLLHPCKVAFLPKGAVLPSGISSFVCRRVYDIANKCLWWLNDQDYINNCQEVVDQLLDKTRLEMHATVQPGGRSPKQMSSPTSTSQLKSGSDSVQNSASSFPSHTKSRKRERVDQGSEPVKRERSSKSEDGDSGNFKHDSFLKTEIARITEKGALVDTEGVEKLVQLMVPDRNEKKIDLASRSLLAAVVAATDKDDCLNQFVQLKGLPVLDEWLQEVHKGKIGDGIGSRDGDKSVEEFLLILLRALDKLPVNLQALQMCNIGKSVNHLRTHKNSEIQRKARGLVDTWKKRVEAEMNINDAKSGSGQTVRWSAGQRIPEVSQGGNRHSGSSSDVAMKSSVTQISASKSASAKVVQVENTARSASPGPAKAVLSPASATTNLKDGQPRVAAVSGGSDLPMANARDEKSSSSSPSHNNSSSSDHAKTGGLSGKEDARSSTAMSANKVSGGSSRRPKANGFSGSAPSGGQRETGSSRTSNLHKNSNSEKLSQSGLMEKALDGASVEGNTPKLIVKIPNQGISPTRSASAGSFDDPTLMNSRASSLVLSEKHDQFDRGSKEKSDFYRANISSDVNTESWQSNDFKDVLTGSDEGDGSPAAVTDEERCRTGDDCKKTLEASKAASSSSGNENKAVNMRDAAYSSINALIEGVKYSEADAVGMNLLASVATGEISKSELLTPAGSPERNTTTEQSSMGNGVVKSSEENVVQGECLSNIGLGEHKNSGSILGASGKNDDDGSDLLSSGGKAAREHEMRVSSCGMDSLPVTEPCLEGQGKLNEKPVSTTPSGLPESIKPEARDGDGSKQPLEEVVGGVNAGENRDDKISAAAGVGMETVEKLPSTSAEVDVKGDNCTAEGLSSGQTTQKPPAILMQSDSVRVTDENLPHRSGCSVEKAPEDLNEQECTNDMATENHASQSKKQQNECESDTLVMPGSRGSVAEHVEENSGTKELHDQPAGQVLHKALPSFPSQEMDKHLDSKGSKLSATEAEEAEECTSTTADTTSMSAAVVSDVDAKVEFDLNEGFNADDGKSSEFNSVASSGCVSSVRLISPVPFPASSMASGIPASITVAAPAKGPFVPPEDLLRSKGELGWKGSAATSAFRPAEPRKVMEVSLATPTTATPDAAVGKSSRPPLEFDLNVPDERILDDISLAADGREHASNITSASPVRCSGGLGLDLNLLDEASDVVGNCSTSNSHKVDVPLIQVKSSSTGPAKEVNVQRDFDLNNGPSVDEVTTEPSAFPLHGRSSLPSQPPISGLRTSNADLGNFSSWFPSAGNTYSAVTISSIMPDRGDQPFSIIGPNGSQRLLGSATGGNPFGHDIYRGPVLSSSPAVSYPPGPFEYPVFPFNSSFPLPSASFSAGSTTYVDSTSGSRICFPPVNSQLMGPAGTVSSHYPRPFVVSLPDGSNSGSAETSRKWARQGLDLNAGPGVSDVEGEKKLHISHKGNFQLPVRRP* 1563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1636 1562 ProSiteProfiles TFIIS N-terminal domain profile. 322 408 IPR017923 -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 693 720 - -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 1078 1107 - -
Aev04g1636 1562 Gene3D - 27 265 IPR043151 -
Aev04g1636 1562 SMART TFS2_5 328 407 IPR003617 GO:0005634
Aev04g1636 1562 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1546 - -
Aev04g1636 1562 SMART BAH_4 40 155 IPR001025 GO:0003682
Aev04g1636 1562 MobiDBLite consensus disorder prediction 218 251 - -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 180 251 - -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 629 645 - -
Aev04g1636 1562 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1546 - -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 1018 1036 - -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 789 810 - -
Aev04g1636 1562 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 273 409 IPR035441 -
Aev04g1636 1562 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 311 419 IPR035441 -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 787 810 - -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 515 603 - -
Aev04g1636 1562 CDD TFIIS_I 330 406 - -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 186 217 - -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 1080 1097 - -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 1018 1043 - -
Aev04g1636 1562 Pfam TFIIS helical bundle-like domain 356 405 IPR017923 -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 836 915 - -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 429 475 - -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 429 603 - -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 626 645 - -
Aev04g1636 1562 MobiDBLite consensus disorder prediction 1512 1562 - -
Aev04g1636 1562 Pfam BAH domain 42 147 IPR001025 GO:0003682
Aev04g1636 1562 MobiDBLite consensus disorder prediction 1334 1362 - -
Aev04g1636 1562 ProSiteProfiles BAH domain profile. 40 155 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1636 Aev-Chr4 12078025 12084295 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Aev04g1636 BAH 3.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1636 - - ccaj:109810746 2129.75