LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g1632	ATGGTGGCGAGGTCATACTCGAATTTGACTGACTTAGTGTCAGGGGATCCTGTAAATATCCCTCCGACTCCTAGAGCACTTCCGCGTGTTATGACTGTTCCGGGAGTTATCTCTGATGTAGAAGGCAACCAGAGCGATGACGACGACGGTTTCCCATCAGAATACCGTCACAAGATTATTATTGTAGCGAATTCTCTTCCTCTCAATGCTAAGAAGGATAAGATATCAGGAAATTGGTTCTTTACTTATGATGAAGATTCGATCTTTTGGCAGTTAAAGGATGGTCTCCCTCCTGATGCTGATGTTTTTTATGTGGGATCCTTGATGGCTGATGTCGATGTTAGCGAGCAAGATCAAGTTTCTAATCAGCTGCTAGAGGAATTCAAATGTGTGCCAACTTTTATTCCTCCAGAAATCCATGAACAGTTTTATGATGGATTCTGCAAGCAACATTTGTGGCCTCTATTCCATTACATGTTGCCGATGTATCCAGGCTATAACAATCGCTTTGATAGGTCGTTGTGGCAGGCTTATGTTTCTGCTAACAAGATATTTGCAGATAAAGTTATGGAGGTCGTTAACCCAGAAGAAGATTATGTATGGATTCATGACTATCATCTTATGGTTCTTCCGACATTTCTGCGCAAGCGGTACAGCAGGATCAAGCTTGGTTTTTTCCTACATAGTCCATTTCCTTCATCAGAAATTTATCGAACTCTGCCAGTCAGGGGTGAAATTTTGAAGGCGCTGCTTAATGCAGATCTAATCGGCTTTCACACATTTGATTATGCTCGCCATTTTCTGTCCTGCTGCAGCCGAATGCTTGGCTTGGAATATGAGTCCAAAAGGGGTTATATTGGGCTCGAATACTTTGGCCGTACAATATTCATCAAAATATTACCTGCTGGGATTCATATGGGCCGAGTTCAATCTGTCTTAGACCATCCTTCTTCTGCTAGCAAAGCCAGAGAAATCTACCAACAATTTGAGGGTAAAACACTTATTGTTGGTGTTGACGATATGGACATCTTTAAAGGTGTAAGTTTAAAGTTCATGGCCATAGAACAACTCCTGCTGCAACGTCCGACACTACAGGGTGAATTAGTACTGGTCCAAATTTTAAATCCTTCAAGGACCAATAGCAAAGATATTGAGGAAGCAAAGGAGGAGGCCTATGTTACTGCTAAAAGGATAAATGAAAAGTTTGGTTTTCCGGGTTATGAACCTGTCATCATCATTGAGCGTCACGTTCCTTTTTATGAGAAGGCAGCCTACTATGCTATGGCAGAATGTTGCATTGTCAATGCGCTGCGGGATGGTATGAACTTGGTTCCGTACAAGTACATTGTGTGTAGGCAGGGGAGTTCTCAAATGGATCAAGCCTTGGAAATTGCCTTTGACTCGCCACGCACAAGCGCACTTGTTATTTCCGAGTTTATAGGTTGCTCTCCATCTCTTAGTGGGGCAATCAGGGCAAACCCGTGGGACATTAATGCTGTAGCTGAAGCTCTAAATTCGGCCCTCACAATGTCCTATGTAGAGAAAAAGTTGCGGCATGAGAAGCACTATCGCTATGTCAGTTCTCATGATGTGGCTTACTGGGCCAAAAGCTTTGAGCGTGATCTAGTGTTGTCGTGCAAGGATCACAATATTAATCGTTGTTGGGGCCTTGGCTTTGGCCTGAATTTCCGGGTTTTGTCCCTTTCTCCTAGTTTCAGGAAGCTGTCAATAGACCACATTGTCTCTGCATATAAAAGGACAGAATGCAGGGCAATCTTTTTGGATTATGATGGCACGGTCGTGCCTGAATCTTCGATCGATAAAGCCCCCAGTCCCGAAGTCATATCCGTGCTAAACAATCTTTGCAGCGATCCCAACAACACCGTCTTCATCGTAAGTGGCAGGGGGAAAACGTCATTGAGTGAATGGTTTGATCAGTGCGAGAATCTTGGTATAGCAGCTGAGCATGGTTATTTTATAAGATGGGGCAACCAGTCAAATTGGAAAATGGGCCATGTAACTACAGATTTTGCTTGGAAAAGAATTGCCGAACCCGTGATGAGATCATATACCGAGTCCACAGACGGCTCCTATATAGAGACCAAAGAGAGTGCCTTGGTATGGCATTATTATGATGCCGATCCTAATTTCGGAACTCGGCAAGCCATTGAGCTTTTGGACCACCTCGAGAGTGTACTTGCGAACGAGCCGGTAATTGTGAAAAAGGGACAGCACATTGTTGAAGTCATGCTTCAGGGAATCACAAAAGGGTTGACTGTACAGGAAGTTCTATCCATGCTAACCAGCAACGGGAAATCGCCGGATTTTGTGCTGTGCATCGGCGATGACAGGTCTGATGAGGACATGTTTGAGAGCATATTAACCAAAGCTTCTAGTTCAGACTCCTCTCCAGCACCAGAAATCTTTTCTTGCACTGTAGGGCAAAAACCAAGCAAGGCTAGGTACTACCTCGACCATACTGCGGATGTGATGCGGCTGCTTCGAGCTCTTGGTTCTGCTTCAAGGCCTATACCAACATTTTCTGATGATGCACCTTCTGAAAATGCAGGAGTATGTTTTGAGAATGTTGTTTGA	2595	0.4405	MVARSYSNLTDLVSGDPVNIPPTPRALPRVMTVPGVISDVEGNQSDDDDGFPSEYRHKIIIVANSLPLNAKKDKISGNWFFTYDEDSIFWQLKDGLPPDADVFYVGSLMADVDVSEQDQVSNQLLEEFKCVPTFIPPEIHEQFYDGFCKQHLWPLFHYMLPMYPGYNNRFDRSLWQAYVSANKIFADKVMEVVNPEEDYVWIHDYHLMVLPTFLRKRYSRIKLGFFLHSPFPSSEIYRTLPVRGEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYESKRGYIGLEYFGRTIFIKILPAGIHMGRVQSVLDHPSSASKAREIYQQFEGKTLIVGVDDMDIFKGVSLKFMAIEQLLLQRPTLQGELVLVQILNPSRTNSKDIEEAKEEAYVTAKRINEKFGFPGYEPVIIIERHVPFYEKAAYYAMAECCIVNALRDGMNLVPYKYIVCRQGSSQMDQALEIAFDSPRTSALVISEFIGCSPSLSGAIRANPWDINAVAEALNSALTMSYVEKKLRHEKHYRYVSSHDVAYWAKSFERDLVLSCKDHNINRCWGLGFGLNFRVLSLSPSFRKLSIDHIVSAYKRTECRAIFLDYDGTVVPESSIDKAPSPEVISVLNNLCSDPNNTVFIVSGRGKTSLSEWFDQCENLGIAAEHGYFIRWGNQSNWKMGHVTTDFAWKRIAEPVMRSYTESTDGSYIETKESALVWHYYDADPNFGTRQAIELLDHLESVLANEPVIVKKGQHIVEVMLQGITKGLTVQEVLSMLTSNGKSPDFVLCIGDDRSDEDMFESILTKASSSDSSPAPEIFSCTVGQKPSKARYYLDHTADVMRLLRALGSASRPIPTFSDDAPSENAGVCFENVV*	865

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g1632	864	CDD	GT20_TPS	58	542	IPR001830	GO:0003824\|GO:0005992
	Aev04g1632	864	Gene3D	Glycogen Phosphorylase B;	51	310	-	-
	Aev04g1632	864	CDD	HAD_TPP	591	832	-	-
	Aev04g1632	864	Pfam	Trehalose-phosphatase	593	826	IPR003337	GO:0003824\|GO:0005992
	Aev04g1632	864	PANTHER	TREHALOSE-6-PHOSPHATE SYNTHASE	1	843	IPR001830	GO:0003824\|GO:0005992
	Aev04g1632	864	SUPERFAMILY	HAD-like	590	838	IPR036412	-
	Aev04g1632	864	Pfam	Glycosyltransferase family 20	58	542	IPR001830	GO:0003824\|GO:0005992
	Aev04g1632	864	Gene3D	Glycogen Phosphorylase B;	311	527	-	-
	Aev04g1632	864	Gene3D	-	718	844	IPR023214	-
	Aev04g1632	864	Gene3D	-	589	703	IPR023214	-
	Aev04g1632	864	PANTHER	ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED	1	843	-	-
	Aev04g1632	864	TIGRFAM	T6PP: trehalose-phosphatase	590	837	IPR003337	GO:0003824\|GO:0005992
	Aev04g1632	864	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	58	542	-	-
	Aev04g1632	864	TIGRFAM	HAD-SF-IIB: HAD hydrolase, family IIB	591	792	IPR006379	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev04g1632	Aev-Chr4	12051817	12054710	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev04g1632	1	864	Trehalose Biosynthesis Gene Families	AT1G23870	66.205	0.0	1230

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g1632	K16055		-	gmx:100812031	1412.51