Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1626 ATGCACACGGATTTCAGCCGCTTTGCGGTGTCGTCGCGGTTCCGGACCCGGTTCCCGGCATCATTCTCCCTCCGCAAAAAGGTACCATGGTGGTACCAAATCCTTGATCCACGTTCCAAGTTCGTGGCACGTTGGAACCGGACGTTTTTGTACGCGTGTGTGGCAGCTTTGTTCTTAGACCCTCTATACTTCTATTTTCCAATCACTGGGGACAAAGCTTGCATGCAAACGGATATAGTCCTTGGCATATTCGTCACGTTTTCTAGAACCGTTGGCGATCTATTCTTCCTATTCCACATGGTCCTTAAGTTTAGGACCGCATATGTTTCCCCTACTTCTCGTGTTTATGGCCGCAAGGAGCTTGTTACGGATCCCAAAATGATTGCTTCTCGCTACCTCAGGTCTGATTTCATCATCGATCTCTTCGCCACTCTTCCTCTTCCTCAGATTGTGATTTGGTTCGTGGTTCCAGCTATCAAAGACTCAACAGCAGCACATGCAAACCACACCATATCCTTAATTGTGCTCATTCAATTTGTGCCTAGGTTGTTTCAGATTTTTCCACTTCAAAGGCGAATCTTAAAGACTAGTGGCCTTATTGCCAAAACTGCATTGGCTGGAGCATTCTACAATCTTGGTGGTTACATGTTGGCTAGCCATGTTTTAGGGGCATCATGGTATGTGTCATCAATACAAAGGCAATACGAGTGTTGGAGGATAACATGCAAGAAAGAGTTGAACAAAACACACTCTCCATCTTGCAATCTTTCGTTTCTGGACTGTGCTACTTTGGACGACCGTGAGAGGCAAGCGTGGTTTAGGCGAACCAGAGTGCTCAGCGATTGTGATGCTCTCAACCCTAAGAGCTTTCAGTTTGGAATGTTTGCTGATGCTTTTCTTGATCATGTCTCTTCCTCAAGATTCATCCAAAAATATTTCTATTGCCTCTGGTGGGGACTCAAAAATCTTAGTTCATATGGGCAAAGTCTGAACACGACCACTTACGTTGGTGAAACATTATTCTCAAGTTTCATCTGCATAGCTGGTCTAATCCTGTTTGCGCATCTCATTGGTAACATGCAGAATTATCTGCAATCTACAACTGCGAGACTTGAAGAGTGGAGACTGAGACAAAAAGACACAGAAGAGTGGATGAGTCATCGTCAACTTCCACCAGATCTACAACAACGAATTCGCAGGTTCACTCAATACAAATGGCTTGCCACAAAAGGTGTCGATGAAGAAGCTATTCTCAAGGCTTTGCCTCTTGACCTTCGCCGCCAGATTCAAAGACATCTCTGTCTCGACATTCTTCGTCGGGTTCCTTTCTTTGGTCAAATGGATGACCAGCTGCTAGATGCAATATGTGAGCGCCTTGTTTCATCACTGAACACAAAGGACACATACATAGTTAGGGAAGGTGACCCTGTGAAGGAGATGATATTCATCATTAGAGGACAACTAGAGAGCTCCACAACAGATGGTGGAAGAACAGGGTACTTCAACTCCATTACCCTAAGGCCAGGTGATTTCTGTGGTGAAGAGTTGCTAACATGGGCATTGGTGGCTGCATCTAACCTCAACCTTCCAGCCTCTACTAGAACTGTCAAGACCATCACTGAGGTTGAAGCTTTTGCTCTCAGAGCTGAGGACCTCAAGTTTGTCTCTAACCAATTCAAGCGCCTTCATAGCAAGAAACTCCAGCACGCTTTCAGGTACTATTCTCATCAATGGAGAGCATGGAGTTCTTGTTTTATACAAACTGCATGGAGGCGGCACCGCAAGAGAAAACTAGCATTGGAGCTTCTAGATAAAGAGAGCATGTTCAATGATGATTATGATTATGATGAGTCTGGTTCTGGAGACAGTTCAATGGGGGCAAGTTCAAGCCATGGACAGAACCTTAGTGCAACAGTTTTGGCCTCAAAGTTTGCTAAAAACACTAGAAGAGGTGCTGGTAAAAAGGTTGCTATAATACCTGATAGTGACAGTTTGAAGATGCCTAAGATGTTCAAGCCAACCGATCCTGATTTCTCAGCATTTTGA 2046 0.4477 MHTDFSRFAVSSRFRTRFPASFSLRKKVPWWYQILDPRSKFVARWNRTFLYACVAALFLDPLYFYFPITGDKACMQTDIVLGIFVTFSRTVGDLFFLFHMVLKFRTAYVSPTSRVYGRKELVTDPKMIASRYLRSDFIIDLFATLPLPQIVIWFVVPAIKDSTAAHANHTISLIVLIQFVPRLFQIFPLQRRILKTSGLIAKTALAGAFYNLGGYMLASHVLGASWYVSSIQRQYECWRITCKKELNKTHSPSCNLSFLDCATLDDRERQAWFRRTRVLSDCDALNPKSFQFGMFADAFLDHVSSSRFIQKYFYCLWWGLKNLSSYGQSLNTTTYVGETLFSSFICIAGLILFAHLIGNMQNYLQSTTARLEEWRLRQKDTEEWMSHRQLPPDLQQRIRRFTQYKWLATKGVDEEAILKALPLDLRRQIQRHLCLDILRRVPFFGQMDDQLLDAICERLVSSLNTKDTYIVREGDPVKEMIFIIRGQLESSTTDGGRTGYFNSITLRPGDFCGEELLTWALVAASNLNLPASTRTVKTITEVEAFALRAEDLKFVSNQFKRLHSKKLQHAFRYYSHQWRAWSSCFIQTAWRRHRKRKLALELLDKESMFNDDYDYDESGSGDSSMGASSSHGQNLSATVLASKFAKNTRRGAGKKVAIIPDSDSLKMPKMFKPTDPDFSAF* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1626 681 Gene3D Helix hairpin bin 369 434 - -
Aev04g1626 681 ProSiteProfiles cAMP/cGMP binding motif profile. 443 517 IPR000595 -
Aev04g1626 681 Pfam Ion transport protein 45 370 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aev04g1626 681 Pfam Cyclic nucleotide-binding domain 466 553 IPR000595 -
Aev04g1626 681 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 9 680 - -
Aev04g1626 681 Gene3D Jelly Rolls 441 561 IPR014710 -
Aev04g1626 681 SUPERFAMILY Voltage-gated potassium channels 36 365 - -
Aev04g1626 681 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 9 680 - -
Aev04g1626 681 SMART cnmp_10 443 571 IPR000595 -
Aev04g1626 681 SUPERFAMILY cAMP-binding domain-like 372 568 IPR018490 -
Aev04g1626 681 Gene3D - 62 367 - -
Aev04g1626 681 CDD CAP_ED 443 574 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1626 Aev-Chr4 11985874 11991587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1626 10 678 Ion Channels AT3G48010 64.815 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1626 K05391 - gmx:100783672 1167.14