Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1623 ATGTTACCAAAATGTAGTTGCAAAATTGTGAAAACTCACATTTCATTTTGGACTATTTTGTTATTAGGAAAAACTTTTCCTGCATATGACCCAAGAACTGGGGAAGTGATTGCTCATGTTGCTGAAGGTGACCAAGAAGATATCAATCGCGCGGTATCGGCAGCTAGAAAGGCTTTTGATGAAGGACCATGGCCAAAGATGACACCTTATGAAAGATCACGAATACTATTGCGGATCGCTGATTTGATCGAGAAACACAGCGATGAGCTCGCCGCACTCGAATCATGGAACAATGGCAAGCTTTATGAACAAGCTTCCGAGATCGAATTACCGATGGTCGTACGAATGCTCCACTATTATGCAGGTTGGGCAGACAAAATCCATGGTCTCACCGTTCCAGCTGATGGGAACTATCATGCACAAATCTTGCATGAGCCAATTGGTGTGGCAGGCCAAATTATACCTTGGAACTTTCCTCTATTGTTGTTTACTTGGAAAGTTGGTCCTGCTCTCGCATGTGGCAACACTGTTGTAGTAAAAACTGCAGAGCAAACACCCTTGACTGGTTTATTTGCTGCAAAGCTATTTCATGAGGCTGGTCTTCCTCCAGGGGTACTAAATGTTGTGTCCGGTTTCGGTCCTACTGCTGGTGCTGCTCTTGCTAGTCACATGGATGTTGACAAGCTAGCATTTACAGGATCAACTAAAACCGGAAAAACCATATACCAATTGGCTGCGAAAAGCAATCTTAAGCCTGTGACATTGGAGCTTGGAGGAAAATCACCTTTCATAGTGTGTGAGGATGCCGATGTCGACAAGGCTGTGGAACTTGCACATTATGCTGTTTTCTTTAATCAGGGACAATGTTGTTGTGCCGGGTCGCGAACTTATGTCCATGAACGAGTATACGACGAGTTCTTGGAGAGAGCAAAGGAAGCTGCTCTGAAACGTGTCGTCGGCGATCCATTCAAGAAAGGCACAGAGCAAGGTCCTCAGATTGATTCAGAACAATTCGAGAAAATTCTACATTACATCAGGACAGGTGTCGAAAGCGATGCGACTCTGGAATGTGGAGGCGAAAGATTTGGCACAAAAGGCTTCTTTATCCAACCAACAGTCTTCTCTAATGTTCAGGATGATATGCTGATAGCAAAAGATGAGATCTTTGGCCCAGTTCAATCCATACTCAAATTCAAGGACATTGATGAAGTTATACACAGAGCAAACAAAACGCGCTACGGTCTAGCTGCCGGCGTGTTCACGAAGAACTTGGACACGGCGAACACATTGATGAGGGGATTGAGGGCCGGAACAGTGTGGATTAATTGCTTTGATGTGTTTGATGCTGCAATTCCATTTGGTGGTTACAAGATGAGTGGTGTTGGAAGGGAAAAGGGTATATACAGCCTCCACAATTACTTGCAGGTTAAGGCTGTTGTTACACCTCTCAAGAATCCTGCATGGTTGTAA 1470 0.4442 MLPKCSCKIVKTHISFWTILLLGKTFPAYDPRTGEVIAHVAEGDQEDINRAVSAARKAFDEGPWPKMTPYERSRILLRIADLIEKHSDELAALESWNNGKLYEQASEIELPMVVRMLHYYAGWADKIHGLTVPADGNYHAQILHEPIGVAGQIIPWNFPLLLFTWKVGPALACGNTVVVKTAEQTPLTGLFAAKLFHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTKTGKTIYQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHYAVFFNQGQCCCAGSRTYVHERVYDEFLERAKEAALKRVVGDPFKKGTEQGPQIDSEQFEKILHYIRTGVESDATLECGGERFGTKGFFIQPTVFSNVQDDMLIAKDEIFGPVQSILKFKDIDEVIHRANKTRYGLAAGVFTKNLDTANTLMRGLRAGTVWINCFDVFDAAIPFGGYKMSGVGREKGIYSLHNYLQVKAVVTPLKNPAWL* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1623 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 261 450 IPR016163 GO:0016620
Aev04g1623 489 Pfam Aldehyde dehydrogenase family 24 479 IPR015590 GO:0016491
Aev04g1623 489 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 283 294 IPR016160 GO:0016491
Aev04g1623 489 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 255 262 IPR029510 GO:0016491
Aev04g1623 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 479 IPR016162 GO:0016491
Aev04g1623 489 CDD ALDH_F2BC 23 481 - -
Aev04g1623 489 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 23 489 - -
Aev04g1623 489 SUPERFAMILY ALDH-like 23 483 IPR016161 GO:0016491
Aev04g1623 489 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 23 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1623 Aev-Chr4 11958959 11962976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1623 23 489 Aldehyde Dehydrogenase Gene Family AT3G48000 79.872 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1623 K00128 - tcc:18603880 864.374