Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1599 ATGATGAAATCAAGCATGAAAGAAATTGATCTTCCCTTTGGTGTCCCTTCATCGTCAAAAGGACTATTCTTGCAAGATTTTCAACAAATGGATCATCAATCTCATTACAATGGTGGTTCCGGTTCGGCTTCCTCATCCAATAATCATAGTCTTTTCGGGGTCCAAAATCTTGCTATGCTAGATCCCTTTGGTACTACTGATAACTTCACATATGGCTCTGCATCATCATCAACATGTTTTGATGTTTTTGAGTGCAAGCCATTTTTGGAGAATAATAGTAATAATAATTATGGTGGTGGCTATCCTCATGCTATAGACAATTTTCAATATGGTGGTTATGGATTGAATCTCACTCATCAGAGTAATCAATTGGACATGATGGTTCCGAATCAGAGCTATTTGCCCTTTATTAATTCTTGCCAAGAAACCAAGTCTGTGAATTTTGTTGTGCCAGATGAAGTGTCATACATGTCACCAATGAATTATTATAAAAAAGTTGCAATCAACAGAATCAACAGGGAATCGTCATATCCGAGCTCTAGAAGGGGATACAAAAACAGGAAGAAGTCTAATATAGTAAAAGGACAGTGGACAGAAAGTGAAGATAGTTTGTTGATTCAATTGGTGGAACAATATGGATTGAGGAAATGGTCACACATTGCTCAGATGTTGCCTGGACGAATAGGGAAACAATGCAGAGAGAGATGGCATAACCATCTAAGGCCAGACATTAAGAAGGACATATGGACTGAAGAAGAGGACAAGATACTGATAGAAGCTCATACAGAGATAGGAAACAAATGGGCAGAGATTGCAAAGAGATTGCCAGGAAGAACTGAAAATTCAATCAAAAACCATTGGAATGCAACAAAGAGAAGGCAATATTCAAAGAGAAAATGCAGAACAAAGTACCCTAGAGGCTCAATCCTTCAAGAATACATCAAGAACTTGAATTTGGACAAGAATCCCCCAATTGACTATAGAAGAAGATCTGTTAACCCAAGAGGCAGCATGAAAAACAAAATTGCCACTAGTACTAATACTAGTACTAGTAAAATTGTAGCACTGCCACCGCCGCCGCCACCGTCGAGCCAGAAAGAACATGATGGTCAATTTGTTCCTAGTGACAATAGGTTGGTTCTGGATTTCGATTTCAATGAGGTCCCTGAATTTTGCTTTGATGAGACTCTGTTTGAAGAAGGGTGTGGAATTGATTCTTTGCTAGATGAGATTCAATGTGTTCCTGTTCCTACTATGCATGATCATGATGATGAGAAGAAGCAAAGTGGTACTAATAATAAAGTTGAAGAAGGGTCAAATTTTGACTCTCTTGTTAATCTTGATGAGAATGATTTTGAGACTGATATGTCACAAGAGATTATGGAATCATTGCTTGGTGCTCAAGTTATTAAGAAGGAGATGGATTTGGTGGAGATGATTTCTCAAGTCAATAAGATTGTTGATGGTTAA 1470 0.3796 MMKSSMKEIDLPFGVPSSSKGLFLQDFQQMDHQSHYNGGSGSASSSNNHSLFGVQNLAMLDPFGTTDNFTYGSASSSTCFDVFECKPFLENNSNNNYGGGYPHAIDNFQYGGYGLNLTHQSNQLDMMVPNQSYLPFINSCQETKSVNFVVPDEVSYMSPMNYYKKVAINRINRESSYPSSRRGYKNRKKSNIVKGQWTESEDSLLIQLVEQYGLRKWSHIAQMLPGRIGKQCRERWHNHLRPDIKKDIWTEEEDKILIEAHTEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRTKYPRGSILQEYIKNLNLDKNPPIDYRRRSVNPRGSMKNKIATSTNTSTSKIVALPPPPPPSSQKEHDGQFVPSDNRLVLDFDFNEVPEFCFDETLFEEGCGIDSLLDEIQCVPVPTMHDHDDEKKQSGTNNKVEEGSNFDSLVNLDENDFETDMSQEIMESLLGAQVIKKEMDLVEMISQVNKIVDG* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1599 489 SUPERFAMILY Homeodomain-like 191 287 IPR009057 -
Aev04g1599 489 Pfam Myb-like DNA-binding domain 194 240 IPR001005 -
Aev04g1599 489 Pfam Myb-like DNA-binding domain 249 288 IPR001005 -
Aev04g1599 489 MobiDBLite consensus disorder prediction 337 353 - -
Aev04g1599 489 CDD SANT 249 291 IPR001005 -
Aev04g1599 489 Gene3D - 248 309 - -
Aev04g1599 489 PANTHER BNAC03G62830D PROTEIN 125 320 - -
Aev04g1599 489 PANTHER MYB PROTEIN-RELATED 125 320 - -
Aev04g1599 489 Gene3D - 193 246 - -
Aev04g1599 489 MobiDBLite consensus disorder prediction 418 432 - -
Aev04g1599 489 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 245 295 IPR017930 -
Aev04g1599 489 SMART sant 245 293 IPR001005 -
Aev04g1599 489 SMART sant 193 242 IPR001005 -
Aev04g1599 489 ProSiteProfiles Myb-like domain profile. 241 291 IPR001005 -
Aev04g1599 489 MobiDBLite consensus disorder prediction 324 372 - -
Aev04g1599 489 MobiDBLite consensus disorder prediction 418 438 - -
Aev04g1599 489 CDD SANT 197 240 IPR001005 -
Aev04g1599 489 ProSiteProfiles Myb-like domain profile. 189 240 IPR001005 -
Aev04g1599 489 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 189 244 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1599 Aev-Chr4 11657015 11659406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1599 6 411 MYB Transcription Factor Family AT4G18770 45.047 2.72e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev04g1599 Myb_DNA-binding 1.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1599 K09422 - gmx:100816653 478.018