Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1578 ATGGCATCATCAAGCTCATACAATTCTCCATGTGCTGCCTGCAAATTCCTGAGGAGAAAATGCATGCCAGGATGCATCTTTGCACCTTACTTCCCACCTGAGGAGCCCCAGAAATTCGCTAACGTCCACAAGATCTTTGGTGCCAGCAACGTGACCAAGCTCCTCAACGAGCTCCTGCCTCATCAGAGGGAGGATGCAGTGAACTCCCTCGCATATGAGGCAGAAGCTCGTGTGAGAGACCCAGTCTACGGTTGCGTAGGCGCCATCTCCTTCCTCCAGAGACAAGTCCAGAGGCTCCAGAAGGAACTTGATGCCGCCAATGCCGATCTTCTTCGCTACGCTTGCAATGAAATCCCTCCTCATTCTCATTCTCATCATCATCATCAATCTCTCCCAGCTATGCCACCAAGCATAGCTTCAATTCAACAAATCCCTCAAAGGCATCACCACTTTGGTGTTGCAACAAGGATTGGTAATGATGTTGGAAGTGGGCTTTATAGACAATCTCCTACTACAACCACTACTACTTTTTCTTTCCCTTATTCTCTTCCTTGGTTTGATCCCTCTCCTGAGGATATCAATGGAGGAGGAGGAGAAGGAGGAGGTGGTTTGTGA 615 0.4878 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYACNEIPPHSHSHHHHQSLPAMPPSIASIQQIPQRHHHFGVATRIGNDVGSGLYRQSPTTTTTTFSFPYSLPWFDPSPEDINGGGGEGGGGL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1578 204 Coils Coil 89 116 - -
Aev04g1578 204 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Aev04g1578 204 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Aev04g1578 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 200 - -
Aev04g1578 204 PANTHER ELONGATED PETIOLULE 1 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1578 Aev-Chr4 11401057 11401671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1578 1 113 AS2 family AT5G63090 94.737 2.79e-74 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev04g1578 LOB 3.6e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1578 - - gmx:100799774 281.952