Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1570 ATGGGTCGCCATTCCTGTTGTTTAAAGCAAAAACTTAGGAAAGGTTTATGGTCCCCTGAAGAAGATGAGAAGCTCTTCAACTACATCACCAGATTTGGTGTTGGTTGCTGGAGTTCTGTTCCCAAACAAGCCGGGTTGCAAAGGTGTGGAAAGAGTTGCAGGTTGAGATGGATCAACTATTTGAGGCCTGATTTGAAGAGAGGCATGTTCTCCCAACAAGAGGAGGATCTTATTATTAGTCTTCATCAAGTTCTTGGAAACAGGTGGGCTCAAATTGCAGCACAATTGCCAGGGAGAACAGATAATGAGATAAAGAACTTATGGAATTCAAGTCTGAAGAAGAAGCTAATGAAGCAAGGAATTGACCCTGCCACACACAAGCCTCTCCTAAGCACTACTACTGATGAATCTCAGATGATGATGATAAAGGAGGAATTAGAAAACATTGAAACCATAGAAACACAACCACCATCATCATCTATGCTAAGTATACCAATTTCTGACAATTCTGTTTCAGCATCACTTGTAATGAGTCATTACTATGATGATGATGCATCAAGATCATCATCATTGGACCCTTTCTCCTACTTTGAATTCCAAATGGCTCAGAATAACAACAATGAAGCTCATTATTATCATCATCATCAAAACTACTATGGATTCACTTCAATGCCAAGCCTGATGAAGAGCTCTGACAATACCAACAACAACATGATGATGATGATGTCGGTGGCAGAGTTTTCATCAGACAATAACAAGTCATCATCAGGTGGTTCAAAGATAAGTTCTAGCAATAGCTCAAATATCAGTACTACTGTTTATCCATCTGGGGAGGAATAG 840 0.3976 MGRHSCCLKQKLRKGLWSPEEDEKLFNYITRFGVGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHQVLGNRWAQIAAQLPGRTDNEIKNLWNSSLKKKLMKQGIDPATHKPLLSTTTDESQMMMIKEELENIETIETQPPSSSMLSIPISDNSVSASLVMSHYYDDDASRSSSLDPFSYFEFQMAQNNNNEAHYYHHHQNYYGFTSMPSLMKSSDNTNNNMMMMMSVAEFSSDNNKSSSGGSKISSSNSSNISTTVYPSGEE* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1570 279 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev04g1570 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Aev04g1570 279 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev04g1570 279 PANTHER MYB DOMAIN PROTEIN 55 1 272 - -
Aev04g1570 279 SMART sant 13 63 IPR001005 -
Aev04g1570 279 SMART sant 66 114 IPR001005 -
Aev04g1570 279 CDD SANT 70 112 IPR001005 -
Aev04g1570 279 CDD SANT 17 61 IPR001005 -
Aev04g1570 279 Gene3D - 69 143 - -
Aev04g1570 279 Gene3D - 11 67 - -
Aev04g1570 279 MobiDBLite consensus disorder prediction 249 279 - -
Aev04g1570 279 PANTHER MYB TRANSCRIPTION FACTOR 1 272 - -
Aev04g1570 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Aev04g1570 279 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Aev04g1570 279 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev04g1570 279 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1570 Aev-Chr4 11311969 11313172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1570 1 136 MYB Transcription Factor Family AT4G01680 82.609 1.35e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev04g1570 Myb_DNA-binding 1.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1570 K09422 - gmx:100799243 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1570 04 11311969 11313172 Aev04g1570 04 11311969 11313172 ECH