Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1558 ATGTTCAGATCCCACAACCACTCCCACCAATACCCAAACTCTCACAATGAGTACAAGACCATGACCGTTTATGAGGAACGTGATGTTGAGGGCTACAACTCCTCCTACCCCAACAACCACCACCACCACCACGCCGCCATGCCGGAGACCCGCGAGAGGGTTGAAGTTGTCGAGTATGAGAGGGTTCCACAGTATGGTGTTGCCGAGGTCATCTGTGAGGAGAAAATTATTGAGACCACTGAAGAGTACCCACGAAGGCACCACAATAATGGTGCCTTCCTTGGCCAGAGAAGAGGGGAGCCGCGGTTCGAGGTAGAGGAAGGTAGAGAACTCGAATGGTGGTGGTTACTTCGCCTGCAGCTTCGAACTCTTGCGCAGAGGGAGGAGGCGAGCGAGGCGGAGCTTGCTGCTGCTCACTGTTGCCGCCGCGACCAGAGGAAGGAGGAGCTCACCGCCGGGATGGCTGATGGTAACGATGATGCTACAACTGACAAGAACAAGAACATTGAGGTATGGAAGATCAAGAACTTGATCAAACTTCTTGAGGCTGCTAGAGGGAACGGGACGAGCATGATTTCTCTCATCATCCCGCCGCGTGATCAGATATCTCGAGTTAGCAAGATGCTTGGTGATGAGCTAGGCACAGCTTCAAACATCAAGAGCAGGGTGAATCGACAATCTGTTATTGGTGCAATCACCTGTGCACAACAGAAGCTTAAGCTTTATAACAGAGTTCCTGCAAATGGGCTTGTTTTGTATACCGGCACGGTTCTGACTGAAGATGGGAAGGAAAAGAGAATCACTATTGATTTTTCGCCTTTCAGACCAATCAATGCTTCACTCTATCTTTGTGACAACAAATTCCACACTGAATCTCTGAATGAGCTCTTGGAATCTGATGAAAAGTTTGGATTCATTGTCATGGATGGTAATGGTGTTCTGTTTGGGACACTGAGTGGTAACACAAGAGAAGTGCTTCATAGATTTGGTGTTGATCTCCCAAAGAAACATGGAAGAGGAGGGCAATCGGCTTTGCGATTCGCCCGTAACTATGTCAGGAAGACTGCAGAGCTCGCGAGGCAGTTTTACATTGATCATGCTACCAGCCAACCGAATGTTTCCGGATTGATACTCGCAGGTTCAGCTGATTTCAAGACCGAGCTTAGTCAGTCTGATTTGTTTGATCCTCGACTTAAGGCGAAGATTCTTAAGGTTGTAGATGTGTCCTATGGAGGGGAGAATGGGTTCAATCAAGCTATTCAACTTTCTGCTGAGGTTCTGTCCAATGTGAAATTCATCAATGAGAAGCACTTGATCGGAAAGTTCTTTGAGGGAATCAGAAAAGACAATGGAAAGTCAGTTTATGGGGTGAGGCAAACTGTGAAAGCTCTAGAACTGCGAGCTGTTGAGACTCTTATTGTTTGGGAAAATCTTGATATGAATAGGTTTGTGTTGAAAAATAGTGATACTGATGAGGTTGTGATTAGGCACTTCAACAAGGAGCAAGAGGCCAATCAGGACAATTTCTGGGACCCTGCAACAAGTGCTGCTTATGAGGTTCAGGAGAAGATATCTCTACTAGAATGGTTTGCGAATGGATACGACAAACAATTCGGCTGTGCTCTCGAGTTTGTCACCAACAAGTCGCAAGAAGGTTCGCAGTTTTGCAACAGCCATGGTTTTGGTGGGATAGGTGCAATCCTGCGTTTTGAGGTTGAACTCGAAGATTCCGATGAAGATGATGAAGTTGTAAGCGATTATGATCAAGTTGAGAGCAATTCAGAGTAG 1788 0.467 MFRSHNHSHQYPNSHNEYKTMTVYEERDVEGYNSSYPNNHHHHHAAMPETRERVEVVEYERVPQYGVAEVICEEKIIETTEEYPRRHHNNGAFLGQRRGEPRFEVEEGRELEWWWLLRLQLRTLAQREEASEAELAAAHCCRRDQRKEELTAGMADGNDDATTDKNKNIEVWKIKNLIKLLEAARGNGTSMISLIIPPRDQISRVSKMLGDELGTASNIKSRVNRQSVIGAITCAQQKLKLYNRVPANGLVLYTGTVLTEDGKEKRITIDFSPFRPINASLYLCDNKFHTESLNELLESDEKFGFIVMDGNGVLFGTLSGNTREVLHRFGVDLPKKHGRGGQSALRFARNYVRKTAELARQFYIDHATSQPNVSGLILAGSADFKTELSQSDLFDPRLKAKILKVVDVSYGGENGFNQAIQLSAEVLSNVKFINEKHLIGKFFEGIRKDNGKSVYGVRQTVKALELRAVETLIVWENLDMNRFVLKNSDTDEVVIRHFNKEQEANQDNFWDPATSAAYEVQEKISLLEWFANGYDKQFGCALEFVTNKSQEGSQFCNSHGFGGIGAILRFEVELEDSDEDDEVVSDYDQVESNSE* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1558 595 Gene3D - 430 590 IPR029064 -
Aev04g1558 595 SMART eRF1_1_2 162 298 IPR005140 -
Aev04g1558 595 SUPERFAMILY Translational machinery components 300 427 - -
Aev04g1558 595 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 171 571 IPR004403 GO:0003747|GO:0006415
Aev04g1558 595 Pfam eRF1 domain 3 432 572 IPR005142 -
Aev04g1558 595 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 163 589 - -
Aev04g1558 595 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 164 298 IPR024049 -
Aev04g1558 595 Pfam eRF1 domain 1 183 296 IPR005140 -
Aev04g1558 595 SUPERFAMILY L30e-like 429 576 IPR029064 -
Aev04g1558 595 Gene3D eRF1 domain 2 294 428 IPR042226 -
Aev04g1558 595 Pfam eRF1 domain 2 302 429 IPR005141 -
Aev04g1558 595 Gene3D eRF1 domain 1 156 293 IPR024049 -
Aev04g1558 595 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 163 589 IPR004403 GO:0003747|GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1558 Aev-Chr4 11220519 11226420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1558 154 586 Eukaryotic Initiation Factors Gene Family AT5G47880 75.964 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1558 K03265 - gmx:100785916 667.151