Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1555 ATGTTCTCAGAACCATCTTTATTCATTCATTATAAGCCTCGTGGTGGTGAAAGTGGCAGAGAAGACGCCACACCACACCCACACACACAGGAGCCACACCCCCACACGACGCCACCCAGCACGACCCGCGAGGACCGCGTTCCTCAGCAGTCGGAGCCTTCGAGGTCGCCGCGGACTCCTGCTTCTGCTTCCGCCGTCCGCCGCCTTAGGTTGACAGTTATCTACTTAGCTCTTCCTCCTTCCATTTCCCTCTCTCCGGTTGCTTTCTTCCCTAATCAATCAGAAAAATCAATTGGCAGTTTCGAGTCACAAAAAATGAGTGTTCCTATGGAGGAGGAGCACCAGGAGCAGGTCACCCTCCAAAACCCCCAATCCGATCAAAACGGCGTCGTAGTTCCGCCATCTCCTCCTTCTCCCATGCTTTCCGAGGACAAAGTCCTTCTCCCTGTTGAGGTGTGCTTGAAGCCTTCTAGCACAGCTCCCATCCACGAAGTTCGTTCAGCCGTCGAGAGGATGCTTGAACAGAGGAATTTGAGCTATTGTGATGGACCCATTCCCCTGCCTCCTGACGAAACCTTTCTCTCACATAACGTCCAACGAATCTGTGTTTGTGATACGGATGAAGGGATGCACAAGGATAACGTTCTTTTGTTCTGGCAAGTCAAGCCTGTTGTGCATGTCTATCAGCTTAGTGAGGAAGGACCATGTGAGGAAATAAGCTCTGATGGTCAGTGTTCCAGCTTCAACGAATGGATTCTTCCTGCTAAAGAATTTGATGGCATATGGGAAAGTTTAATATTTGAATCTGGTCTAAAGCAAAGGTTGTTACGTTATGCAGCCAGTGCTTTGCTCTTCACTGAGAAGGGTGTTGATCCATTCCTTGTTTCATGGAATCGCATAATTCTCTTACATGGACCCCCCGGGACTGGAAAGACATCTTTATGTAAAGCATTAGCTCAGAAATTATCAATCCGATTCAATTCAAGATACACACAATCACAGCTTATTGAAGTGAATGCACATTCTTTGTTCAGTAAATGGTTCTCCGAAAGCGGCAAGCTGGTTGCAAAACTTTTCCAAAAGATTCAAGAAATGGTAGAGGAAGAAAGCAATCTGGTATTTGTTTTGATAGATGAAGTCGAAAGCCTTGCTGCTGCTAGAAAAGCTGCTTTATCTGGTTCTGAACCTTCAGATTCTATTAGGGTTGTCAACGCATTACTAACTCAGATGGACAAGTTAAAATCATCTCCAAATGTGATAATTCTAACCACATCCAACATAACTGCTGCTATTGATATTGCTTTTGTTGATAGGGCTGATATCAAAGCATATGTCGGTCCCCCAACTCTTCAAGCTCGGTATGAAATACTAAGGTCTTGCTTGCAGGAATTGATGCGTGCAAGGATCTTAACTGGTTTACAGGATTGTGAGGATATCACTCTTCCAAGTTATGCCAGTGCAAAGGACAGGTCGAACTTATCAGATTTTAATGAGGCTTCTGCTCCCATGCAACTGTGCAAGCAACTACTTGAAACTGCAGAGGCATGTGAGGGAATGAGTGGGAGGTCTCTGAGAAAGCTTCCATTTTTGGCACATGCTGCACTAGCCAATCCTTTTGATTGCACCCCTCTTAAGTTCTTGTGTACAATGATAGAAACAGCAAAGAGGGAGCGTTCTGAGCTTCCTGATTAA 1692 0.4563 MFSEPSLFIHYKPRGGESGREDATPHPHTQEPHPHTTPPSTTREDRVPQQSEPSRSPRTPASASAVRRLRLTVIYLALPPSISLSPVAFFPNQSEKSIGSFESQKMSVPMEEEHQEQVTLQNPQSDQNGVVVPPSPPSPMLSEDKVLLPVEVCLKPSSTAPIHEVRSAVERMLEQRNLSYCDGPIPLPPDETFLSHNVQRICVCDTDEGMHKDNVLLFWQVKPVVHVYQLSEEGPCEEISSDGQCSSFNEWILPAKEFDGIWESLIFESGLKQRLLRYAASALLFTEKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRYTQSQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELMRARILTGLQDCEDITLPSYASAKDRSNLSDFNEASAPMQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPFDCTPLKFLCTMIETAKRERSELPD* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1555 563 MobiDBLite consensus disorder prediction 14 29 - -
Aev04g1555 563 MobiDBLite consensus disorder prediction 114 129 - -
Aev04g1555 563 MobiDBLite consensus disorder prediction 35 61 - -
Aev04g1555 563 CDD AAA 299 447 - -
Aev04g1555 563 Gene3D - 246 465 IPR027417 -
Aev04g1555 563 SMART AAA_5 297 449 IPR003593 -
Aev04g1555 563 MobiDBLite consensus disorder prediction 111 130 - -
Aev04g1555 563 PANTHER PACHYTENE CHECKPOINT PROTEIN 2 141 560 IPR044539 -
Aev04g1555 563 MobiDBLite consensus disorder prediction 1 64 - -
Aev04g1555 563 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 301 319 IPR001270 GO:0005524
Aev04g1555 563 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 415 429 IPR001270 GO:0005524
Aev04g1555 563 Pfam ATPase family associated with various cellular activities (AAA) 301 446 IPR003959 GO:0005524|GO:0016887
Aev04g1555 563 ProSitePatterns AAA-protein family signature. 419 438 IPR003960 GO:0005524|GO:0016887
Aev04g1555 563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 261 528 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1555 Aev-Chr4 11204223 11211385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1555 246 464 Calmodulin-binding Proteins AT3G56690 30.357 5.96e-16 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1555 K22399 - gmx:100812167 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1555 04 11204223 11211385 Aev04g1555 04 11204223 11211385 ECH