Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1553 ATGCCGCAGGATTCCTCCGATCAAGACCATGAAGAACCCAAAAACGAGTTCGTCGAGGTTGATCCTACGGATCGCTATGGTCGGTACAAGGAAGTTTTAGGGAAGGGGGCTTTCAAGAAAGTATATCGAGCCTTTGATGAGTTGGAAGGAATTGAAGTGGCTTGGAATCAGGTTAAGGTTGCGGATCTGTTGCGTAACTCGGAAGACTTGGAGCGGCTTTATTCAGAGGTTCATCTGCTCAAGACTTTGAAGCACAAGAATATTATTAAGTTCTACAATTCGTGGGTTGACACCAAGAATGAGAACATCAACTTCATCACTGAAATTTTCACCTCCGGAACATTGCGCCAATACCGGAAAAAGCACAAGCATGTTGATTTAAGAGCTTTGAAGAAGTGGTCTAGGCAGATCTTGGAGGGCCTTCTTTATCTTCACAGTCATAATCCACCAGTTATTCATCGAGACCTAAAGTGTGACAACATTTTTGTCAATGGGAATCAAGGAGAGGTGAAAATTGGTGATTTAGGATTGGCAGCCATTCTTCAACAGGCCAATTCAGCTCACAGTGTCATAGGTACCCCGGAGTTCATGGCCCCAGAACTTTATGAAGAGGAGTACAATGAGCTTGTTGATATATATGCTTTTGGCATGTGCTTGTTAGAGTTGGTAACCTTTGAGTACCCATATGTTGAATGTAGCAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATAAAGCCAGCATCATTGGCAAAAGTGGCAGATCTTGAAGTTAAGGCATTTATAGAAAAGTGTCTCGCTGATGTATCTGAACGGTTGCCTGCAAAGGCTCTCTTGATGGATCCCTTCCTTCAGCCAGACTTTGATTGTGAAAGTGTAGGTCGTTCTTCAAGGTCTGGAACCCATCATTCAGATGCAGGAAATAGTTCTAATAATCAAGCAACTGGAAAAAGTATCGAGGATATTTCTGTTGAGACAAGTAGGGAATTCACAGTGGAAGGTCAGAGGAAAGATATTAATACAATATTTTTAAAACTGCGGATAGCAGACTCCTCAGGCTATATTCGGAATATCCACTTCCCTTTCGATATTGGAGCAGACACTTCAATCTCCGTTGCTAGTGAGATGGTTGAAGAGTTGGAACTTACTGATCAAGATGTTACAACCATTGCTGATATGATTGACTCGGAAATACGATATCTTATTCCTGATTGGAATCCCAATGAATCCCCTGCTGGTAGTGGTACTTCTGAAAGTAGGCTTGAAGCTTCTCCTATAGGAAATGATTCACCCACTCCTAGTGGCAGTCTTGCATTAGAAATACTACGTTCAGGTCGTAAGTACTGGTCGGACTCACCCAAGGGAGTTGGTGGAGGCCCTCTATCTAAGCATGGTACTTCAAACTTGACTCATGTAGTGGATGTGATTGCTGAGGAAGGAACCTTGACTGAAAATGGTGTTACTTCAGATGAACTGGAGCCTCATGACCAGATCTGTGTTGGTGATTACGGTACCAAGAAGGAATGTGAAGGGACTGCTGATCCCCCTACCACCGAGACAAGTATTACATCTGAGCATTTGGAAGCAACCAGTAAAAATTCATCTCTGGTAGAAATCTCTGCAAGTTCGGAAGATTCTGAAATAGATGTCAATAAAATAGCCGAAGAACTTGAGAATTTGTTGACAACACAAAGAGAGGAGCTAGAAGAATTAAGAAGGAAGCACAAATTAGCTCTCTCAGATCTTTTGAAGGAACTTCCTCCAGAAATTTGCAAGAGGGTCTTGAATACATGCAAACTGCAGATGCCTGAGAATGAAAATGTCGGTACACAAAAGATAACATCACATCCCCAAAACCAAAAACCCAACTCACTCTCTTCTTCTCCTTCTCCTTCTCCTTCTCCTTCTTCTCTCTATTCCATTCTCCTCCAAATCCCAAATTCAATTCATTCTACAATGGCAATTTCTACAGCAGCAGCAGCAACCTCAGCTTCCTCGAAACTCTTATACCCACATGCAACAACCACCACCACCTCTTTCCGTTCTTCCGCCACTAACCCAAAACTAACCGCCACCAATCTCTCCTCCTCCTTCCTCAACGCCTCCTCAACAATCCTCCACCTCACCCCTTCAACCACCACCACACGACACCATCACCGCAGCTTCACTATACGCGCGGCGCGTGGGAAGTTCGAGCGGAAGAAGCCGCACGTCAACATTGGAACCATAGGCCACGTCGACCACGGCAAGACTACCTTGACGGCGGCGCTCACGATGGCGCTTGCGGCGCTGGGGAACAGTGCGCCCAAGAAGTACGACGAGATTGACGCCGCGCCGGAGGAGAGGGCGCGTGGTATCACGATCAACACTGCCACGGTGGAGTACGAGACGGAGAGCAGGCACTATGCCCACGTGGACTGCCCTGGCCACGCCGATTACGTCAAGAACATGATTACCGGCGCCGCCCAGATGGACGGCGCAATTCTGGTGGTGTCCGGCGCCGATGGCCCCATGCCGCAGACGAAGGAGCATATACTGTTAGCGAAGCAGGTTGGGGTTCCCAACATGGTTGTCTTCCTCAACAAGCAAGACCAGGTGGATGATGAGGAGCTTCTGCAGCTTGTGGAGCTTGAGGTTCGTGAGCTTTTGTCCTCCTACGAGTTCCCTGGTGATGAAATTCCCATTGCCTCTGGTTCCGCTCTGTTGGCCTTGGAAGCTTTGATGGCGAACCCTTCAATCAAGCGTGGTGATAATGAGTGGGTGGATAAGATCTATTCTCTCATGGATTCTGTGGATAGCTACATTCCCATCCCTCAGCGTCAGACCGATCTTCCCTTCTTGCTTGCTGTGGAAGATGTGTTTTCCATCACCGGTCGTGGAACCGTCGCCACAGGCCGTGTTGAGAGAGGGACCATTAGGGTTGGAGACACTGTTGACCTTGTTGGTATCAGGGAAACTAGGAATACTACTGTGACCGGTGTGGAAATGTTCCAGAAGATTCTGGATGAGGCCATGGCTGGTGACAACGTGGGGTTGTTGCTTAGGGGTATTCAGAAGGTTGATATTCAGAGAGGGATGGTTTTGGCCAAACCTGGCACCATCACACCACACACAAAGTTCTCAGCAATTGTCTATGTTTTGAAGAAGGAAGAAGGAGGGAGGCACTCGCCTTTCTTTGCCGGTTACAGGCCGCAATTCTACATGAGGACCACCGATGTCACTGGCAAGGTTACTCAGATTATGAATGACAAGGATGAGGAGTCCAAGATGGTGATGCCTGGTGACCGCGTTAAGATGGTGGTGGAACTTATCCAGCCGGTGGCGTGTGAACAGGGAATGAGGTTTGCTATTAGAGAAGGAGGGAAGACTGTTGGAGCTGGTGTTATCCAAGCCATCATTGAGTGA 3408 0.471 MPQDSSDQDHEEPKNEFVEVDPTDRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVADLLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLLYLHSHNPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYVECSNAAQIYKKVTSGIKPASLAKVADLEVKAFIEKCLADVSERLPAKALLMDPFLQPDFDCESVGRSSRSGTHHSDAGNSSNNQATGKSIEDISVETSREFTVEGQRKDINTIFLKLRIADSSGYIRNIHFPFDIGADTSISVASEMVEELELTDQDVTTIADMIDSEIRYLIPDWNPNESPAGSGTSESRLEASPIGNDSPTPSGSLALEILRSGRKYWSDSPKGVGGGPLSKHGTSNLTHVVDVIAEEGTLTENGVTSDELEPHDQICVGDYGTKKECEGTADPPTTETSITSEHLEATSKNSSLVEISASSEDSEIDVNKIAEELENLLTTQREELEELRRKHKLALSDLLKELPPEICKRVLNTCKLQMPENENVGTQKITSHPQNQKPNSLSSSPSPSPSPSSLYSILLQIPNSIHSTMAISTAAAATSASSKLLYPHATTTTTSFRSSATNPKLTATNLSSSFLNASSTILHLTPSTTTTRHHHRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALAALGNSAPKKYDEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDEIPIASGSALLALEALMANPSIKRGDNEWVDKIYSLMDSVDSYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIRVGDTVDLVGIRETRNTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKVDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTQIMNDKDEESKMVMPGDRVKMVVELIQPVACEQGMRFAIREGGKTVGAGVIQAIIE* 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1553 1135 TIGRFAM small_GTP: small GTP-binding protein domain 739 871 IPR005225 GO:0005525
Aev04g1553 1135 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g1553 1135 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g1553 1135 MobiDBLite consensus disorder prediction 295 319 - -
Aev04g1553 1135 Hamap Elongation factor Tu [tuf]. 727 1135 IPR004541 GO:0003746|GO:0005525|GO:0006414
Aev04g1553 1135 Gene3D Translation factors 942 1070 - -
Aev04g1553 1135 PANTHER ELONGATION FACTOR TU 683 1135 - -
Aev04g1553 1135 CDD EFTU_II 947 1033 IPR033720 -
Aev04g1553 1135 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g1553 1135 CDD EF_Tu 737 939 IPR041709 -
Aev04g1553 1135 PANTHER ELONGATION FACTOR TU-RELATED 683 1135 - -
Aev04g1553 1135 Gene3D - 341 414 - -
Aev04g1553 1135 MobiDBLite consensus disorder prediction 410 437 - -
Aev04g1553 1135 MobiDBLite consensus disorder prediction 611 638 - -
Aev04g1553 1135 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 345 399 IPR024678 GO:0004674|GO:0005524
Aev04g1553 1135 Pfam Elongation factor Tu GTP binding domain 736 937 IPR000795 GO:0003924|GO:0005525
Aev04g1553 1135 SUPERFAMILY Translation proteins 941 1037 IPR009000 -
Aev04g1553 1135 CDD STKc_WNK 25 285 - -
Aev04g1553 1135 Pfam Elongation factor Tu domain 2 961 1029 IPR004161 GO:0005525
Aev04g1553 1135 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 777 792 IPR031157 -
Aev04g1553 1135 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Aev04g1553 1135 PRINTS GTP-binding elongation factor signature 820 831 IPR000795 GO:0003924|GO:0005525
Aev04g1553 1135 PRINTS GTP-binding elongation factor signature 804 814 IPR000795 GO:0003924|GO:0005525
Aev04g1553 1135 PRINTS GTP-binding elongation factor signature 857 866 IPR000795 GO:0003924|GO:0005525
Aev04g1553 1135 PRINTS GTP-binding elongation factor signature 740 753 IPR000795 GO:0003924|GO:0005525
Aev04g1553 1135 PRINTS GTP-binding elongation factor signature 784 792 IPR000795 GO:0003924|GO:0005525
Aev04g1553 1135 MobiDBLite consensus disorder prediction 1 21 - -
Aev04g1553 1135 Coils Coil 551 586 - -
Aev04g1553 1135 CDD EFTU_III 1036 1130 - -
Aev04g1553 1135 Gene3D - 728 939 IPR027417 -
Aev04g1553 1135 Gene3D Translation factors 1074 1134 - -
Aev04g1553 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 734 962 IPR027417 -
Aev04g1553 1135 SUPERFAMILY Protein kinase-like (PK-like) 29 653 IPR011009 -
Aev04g1553 1135 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
Aev04g1553 1135 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 736 940 IPR000795 GO:0003924|GO:0005525
Aev04g1553 1135 Pfam Elongation factor Tu C-terminal domain 1034 1133 IPR004160 -
Aev04g1553 1135 TIGRFAM EF-Tu: translation elongation factor Tu 728 1135 IPR004541 GO:0003746|GO:0005525|GO:0006414
Aev04g1553 1135 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 1034 1134 IPR009001 -
Aev04g1553 1135 MobiDBLite consensus disorder prediction 405 437 - -
Aev04g1553 1135 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1553 Aev-Chr4 11176139 11183820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1553 17 411 MAP Kinase Kinase Kinase AT3G22420 54.751 2.08e-159 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aev04g1553 Pkinase 1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1553 K02358 K08867 gmx:100272204 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1553 04 11176139 11183820 Aev04g1553 04 11176139 11183820 ECH