Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1516 ATGGCTACCGTGATGATCACCCCCTCCTCCACCCGGGTCTTACCCGAACCCGACCTGTACCTTCAACCTTCCAAAGGACCCCGCATTCCAGCACACGCTACCATTTTGGCTTCGGCGTCACCGGTTCTAGAGAACATCATAATGTCGAACAAAGCCGTGAAAATCCAGGGCGTCCCATACGACGCCGTGACGGCCTTCGTACGGTACCTCTACTCCGGCAGGTGCACGGAGGAAGAAATGGACAAGTGTGGGATGCACCTTCTGGCGCTGTCGCACGTGTACCTGGTGCGGAAGCTGAAGCAGAGGTGCGTGGAGGGTTTGGCCAAGCGCGTGACGGAAGAGAGCGTGGTGGACGTCTTGCAACTCGCTAGGCTCTGCGACGCACCCGATCTTTACCTCAAGTGCGTTAAACTTCTCACTCTTCGCTACGAAACGGTTAAGAAAACTGAAGGATGGAGGTTCCTTCAGAACCACGATCCTGCTCTCGAGCTCGATATTCTTCGTCTAATCGAAGATCACGAAACCAGGAAGAAGAAATCAAGAAGGAGAAGGGAAGAGGAGAGTGTGTACAAGGAGCTGAGCGAGGCGATGGAGTGTTTGGAACACATATGCAGGGAAGGGTGCACACTGGTGGGGCCTAATGACGTGGACCACCGGAAGGAACCCTGCTCAAAGTTCGCCACGTGTCAGGGGATTCAGGGGTTGATATGTCATTTGGGGAGGTGTAAGAGGAGGGTTTCAGGAGGGTGCTTGCGGTGTAAGCGCTTGTGGCAGCTATTTAGACTGCATTCCTCCCTTTGCCAACACCGTGACGACGATCTTTCATGCAAAGTCCCTCTCTGCAGGGCTACAAGTATAATTAATATTAGTGAACGTACTGATTAA 885 0.5322 MATVMITPSSTRVLPEPDLYLQPSKGPRIPAHATILASASPVLENIIMSNKAVKIQGVPYDAVTAFVRYLYSGRCTEEEMDKCGMHLLALSHVYLVRKLKQRCVEGLAKRVTEESVVDVLQLARLCDAPDLYLKCVKLLTLRYETVKKTEGWRFLQNHDPALELDILRLIEDHETRKKKSRRRREEESVYKELSEAMECLEHICREGCTLVGPNDVDHRKEPCSKFATCQGIQGLICHLGRCKRRVSGGCLRCKRLWQLFRLHSSLCQHRDDDLSCKVPLCRATSIINISERTD* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1516 294 ProSiteProfiles BTB domain profile. 17 79 IPR000210 GO:0005515
Aev04g1516 294 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 8 284 - -
Aev04g1516 294 SMART TAZ_2 187 282 IPR000197 -
Aev04g1516 294 Coils Coil 183 203 - -
Aev04g1516 294 CDD BACK 112 155 - -
Aev04g1516 294 SUPERFAMILY POZ domain 25 139 IPR011333 -
Aev04g1516 294 Gene3D Potassium Channel Kv1.1; Chain A 16 111 IPR011333 -
Aev04g1516 294 SUPERFAMILY TAZ domain 185 283 IPR035898 -
Aev04g1516 294 Pfam TAZ zinc finger 194 281 IPR000197 -
Aev04g1516 294 Pfam BTB/POZ domain 18 108 IPR000210 GO:0005515
Aev04g1516 294 Gene3D - 112 183 - -
Aev04g1516 294 Gene3D TAZ domain 184 292 IPR035898 -
Aev04g1516 294 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 8 284 IPR044513 -
Aev04g1516 294 SMART BTB_4 17 111 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1516 Aev-Chr4 10938158 10939333 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Aev04g1516 BTB 2.5e-10 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1516 - - gmx:100813611 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1516 04 10938158 10939333 Aev04g1516 04 10938158 10939333 ECH