Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1514 ATGGATGTGCCGCGGCATTCGGCGGATGTTCCTATTTCTAGAACTCTTGTAGCACTGAGGAGAGTGAGGTCATTGAGGGATCCATCAACTAATTCTATGACCAAACTCTCCTCTTTGATCGATCATGTTCACTGGGAAAACGGTTCGAGTAATGGGATTTCTCTGCGGTTTTTGGATGCTAATCCTGCATCTAATGGTGCTTTGATGAGATCAAAGGATTTAGGTTTTGTGGGTTCTGCTGATTTTGCATTGAATTGTGGAGTCTCATCATGTCATGAAGGGCAACTCTATGATCAACCCTCTTACTCTGATCCGAGTGAAAGCTGTTGTGGGGATTTGCCTCACAACTTGCTTCCTAGTAACCATTTCAATGATGTAGCAGGTACTAGATCATCTCAATTAGGGAGAATAGATCACTACACTAAGTCAGTGAAGAAATCGCAGCGAAAACCATCTGAACTTGTGGGTGGCATTGTTAGCCATTTAGGCAGTCCTTGCCTTTCTGTTCGCGATGCTTTCTCGCCGCATAGTTCCTCGATGCATATCGATGATTTAGATGATAATGGAAACGGATGTGGAATAAGCTGTTGTTGGTCTAAGTCACCAAGGTTTAGAGAAACAAATCGTTATTGTGAAATAGATGAGACAGAATTACTTCATGGACATAGAAGCATGAGACTTGTTAGTGGTGAAATCAGTCCAAATTTGGAAACTCCTAGAAACTTATCAATGAAATTCAGGCCTAAATTGTTTAGTGATCTGGTTGGACAAAATGTGGTGGTAAGGTCTCTTCTTGGTGCTATCTTCACAGGAAGGATAACATCATTTTATATCTTCCACGGTCCTCGCGGCACCGGCAAGACATCTGCCTCTAGGATATTTGCTGCTGCACTGAATTGCCTCTCCGCCGGCGAGCAAAAGCCGTGCGGTATGTGCAGAGAATGTGTCTTGTTCTTTTCTGGAAGAAGTAAAGATGTTAAAGAAGTGGATTCTATGAAAATGAATTGTTCAGACCAGGTTAAATCCCTCCTTAAGAAAGCATGCTTCCCTCCGGCTTCTTCGCGGTTTAAGGTTTTCATTATTGATGAGTGTCAGCTACTGAATGGGGAGACATGGGCAAGTCTTTTGAATTGCCTAGACAACCTTTCTCAGCATGTTGTTTTTGTGATGATTACACCGGATTTGGATAAGCTTCCTCGGAGTGCGGTTTCCCGGGCTCAGAGGCATCACTTCCCAAAGATTAAAGATGCTGACATTGCTAGCAGATTAGAAAAGATTTGTGCAGAAGAAGGTATAGATGCAGAACAAGCTGCTCTAGACTTTATTGCTGCGAAATCGTGTGGTTCGCTTAGGGACGCGGAAATGATGCTTGATCAGTTGAGTCTACTTGGTAAAAAGATCACAATTTCCTTAGCTTATGAGCTTACTGGGATTGTTTCTGATGATGAACTGCTCGATTTGCTGGATCTGGCTTTGTCGTCCGACACTTCAAACACGGTTATTCGAGCTCGGGAGCTGATGAGATCAAGGATAGATCCGTTGCAACTTATATCACAGCTGGCAAATCTCATTATGGACATCCTTGCAGGGAAATGTGAGGACAATGTTTCTGAATTCAGAAATAGGCTATCAAGCAGATATACATCCGACTTAGATCTTCAGAAACTAAATCAAGCACTGAAAATTCTTTCTGAAACTGAGAAACAGTTGAGAGTTTCAAAGAATCAAACAACATGGTTCACTGTGGCTCTCTTACAGTTAAGCTCAGTAGACTATTCACCTGTGGATGCAAATAATACCAAGTTGTGTTTGAAGGGAGCATGCAATGGAGATGGTGATTGCTGCAGTTCATCATCCACAGAGAAGAGCTTAAAGCATCTTTCTACAACTCAATGTGATAAGAAATCACATACATTAGGAGTACATGATGATCACAAAAGAACTTTGGATTCTGTTTGGTATAAAGCTACAGAGCTGTGTCAATCTAATCAGCTCAGAACTTTTCTTAGGAAGCAAGGAATGTTGTCATCACTTCATGTTGATTGCAATAATTGCCTTGCTGTCGCCGACTTGGAGTTCCACCATCGCCGACACGTATCTAAGGCAGAGAAGTCATGGAAACTGATAGCAAATTCCTTGCAGTTCATTTTAGGTTGCAACATTGAGTTGAGGATCAATTATGTACCTTGTGCATCTGATTCGAAGTGCGCCAGATTGAAGAGGACAACGATCAGTTTCTTCGGCTGCACGCGTAGAATTCAGCAGAGATTCTTTTCGCCTGATGATGAACAAGGAAGCGAAGAATCAGACTATGCATCTGAGAATCCAATGATGATGGACAATAATAAAAATCAAACACCTTCATGTGATTGTGGTTCTTACCATGGAAATGGAATGGAGGTTGTAGCAACATTGAGAAGCTGTGAAGGGAATTTACTCAGCTCAGGAAAAAGATTGATGAATAGGTCATCATGCACATCAGCATCATCACCTTGTGCTCATCTAATTCCATCAACCATGGATTCAGATACTAACCAGTCTAAATGTTTTCCTCAAACTCTCTGGATTCAAAAGAAGTTCAGTTCTTCATATTCAGCAACATAA 2604 0.4171 MDVPRHSADVPISRTLVALRRVRSLRDPSTNSMTKLSSLIDHVHWENGSSNGISLRFLDANPASNGALMRSKDLGFVGSADFALNCGVSSCHEGQLYDQPSYSDPSESCCGDLPHNLLPSNHFNDVAGTRSSQLGRIDHYTKSVKKSQRKPSELVGGIVSHLGSPCLSVRDAFSPHSSSMHIDDLDDNGNGCGISCCWSKSPRFRETNRYCEIDETELLHGHRSMRLVSGEISPNLETPRNLSMKFRPKLFSDLVGQNVVVRSLLGAIFTGRITSFYIFHGPRGTGKTSASRIFAAALNCLSAGEQKPCGMCRECVLFFSGRSKDVKEVDSMKMNCSDQVKSLLKKACFPPASSRFKVFIIDECQLLNGETWASLLNCLDNLSQHVVFVMITPDLDKLPRSAVSRAQRHHFPKIKDADIASRLEKICAEEGIDAEQAALDFIAAKSCGSLRDAEMMLDQLSLLGKKITISLAYELTGIVSDDELLDLLDLALSSDTSNTVIRARELMRSRIDPLQLISQLANLIMDILAGKCEDNVSEFRNRLSSRYTSDLDLQKLNQALKILSETEKQLRVSKNQTTWFTVALLQLSSVDYSPVDANNTKLCLKGACNGDGDCCSSSSTEKSLKHLSTTQCDKKSHTLGVHDDHKRTLDSVWYKATELCQSNQLRTFLRKQGMLSSLHVDCNNCLAVADLEFHHRRHVSKAEKSWKLIANSLQFILGCNIELRINYVPCASDSKCARLKRTTISFFGCTRRIQQRFFSPDDEQGSEESDYASENPMMMDNNKNQTPSCDCGSYHGNGMEVVATLRSCEGNLLSSGKRLMNRSSCTSASSPCAHLIPSTMDSDTNQSKCFPQTLWIQKKFSSSYSAT* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1514 867 Gene3D - 478 591 - -
Aev04g1514 867 Coils Coil 553 576 - -
Aev04g1514 867 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 241 463 IPR027417 -
Aev04g1514 867 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 130 826 - -
Aev04g1514 867 CDD HLD_clamp_pol_III_gamma_tau 414 477 IPR045085 -
Aev04g1514 867 SUPERFAMILY post-AAA+ oligomerization domain-like 484 586 IPR008921 GO:0003677|GO:0006260
Aev04g1514 867 MobiDBLite consensus disorder prediction 760 779 - -
Aev04g1514 867 PANTHER DNA POLYMERASE III SUBUNIT GAMMA/TAU 130 826 - -
Aev04g1514 867 Gene3D - 235 412 IPR027417 -
Aev04g1514 867 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 241 587 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Aev04g1514 867 Pfam DNA polymerase III, delta subunit 257 414 - -
Aev04g1514 867 Gene3D - 415 477 - -
Aev04g1514 867 CDD AAA 255 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1514 Aev-Chr4 10902249 10905362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1514 232 526 Core DNA Replication Machinery Family AT1G21690 23.411 2.78e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1514 - - gmx:100819111 1077.77