Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1509 ATGGCGGAGCCACCAAACGGCGACGTATTCCCGTGGCTGAAGTCGCTGCCGGTGGCGCCGGAGTACCGACCAACGCTGACGGAGTTCCAAGATCCGATCGCGTACATTTTCAAGATCGAGAAGGAGGCTTCTAAGTACGGAATCTGTAAAATCATTCCGCCCTTCCCTCCACCTCCTAAGAAAACCGCAATCGCCAACTTCACCCGCTCACTCGCCGCCCGGCCCCAACAAGGCCCTGATTCCAGGCCAACATTCACCACTCGCCAGCAGCAGATCGGCTTCTGCCCCCGCCGGCCTAGGCCCGTACAGAGGCCCGTCTGGCAGAGCGGTGAGCACTACACCTTCCAGGAATTTGAAGCTAAAGCCAAGTCATTCGAGAGAAGCTACCTCAAAAAGCACCTTCACCGGAAAGGAGGAGCTACCGGTGGAGCCGGTAGCCTCTCCGCGCTCGAAGCTGAGACTCTCTTCTGGAAAGCCACCGTTGATAAGCCGTTCTCGGTTGAGTATGCTAATGACATGCCGGGCTCGGCTTTCAGCCGGAAATGCAGGGACGACGGCGGTGGTGCGGCTGCTCTGGCGGAGTCTGCGTGGAACATGAGGGAGGTTTCGAGGGCGAATGGCTCGTTGTTGAGGTTCATGAAGGAGGAGATTCCGGGGGTTACTTCGCCGATGGTGTATCTTGCTATGTTGTTTAGCTGGTTCGCTTGGCATGTGGAGGACCATGACTTGCATAGCTTGAATTACCTTCATATGGGAGCTGGCAAGACTTGGTATGGCGTGCCAAGGGATGCTGCTGTGGCGTTCGAGGAGGTGGTTAGGGTTCATGGTTATGGTGGAGAGATAAACCCTCTTGTTACTTTTGCTACCCTTGGTGAGAAAACCACAGTGATGTCGCCTGAAGTATTGATTAGCGCAGGTGTTCCTTGCTGCAGGTTAGTTCAAAATGCTGGGGAATTTGTTGTAACATTTCCAAGAGCTTATCACTCAGGGTTTAGTCATGGTTTTAATTGTGGAGAGGCAGCTAACATTGCAACACCTGAATGGTTGAGAGTTGCTAAAGATGCTGCTATTCGGAGGGCTTCAATCAATTACCCTCCCATGGTTTCACATTTTCAGTTACTTTATGACCTTGCCTTAGCTCTGTATAGAATTCCTGAAGGTATCAGTGCTGAACCACGGAGTTCTCGTCTTAAGGATAAGAAGAGGAGTGAAGGGGAAACTGTAATTAAAGAAATATTTGTTCGGGATGTGTTACAGAACAATGATTTACTACATGTACTCAGCAAAGGATCTGCTGTAGTACTTCTTCCTCGTAGATCATTTGACATTTCTTTTTGCTCAAAATTACGTATTGGGTCCCAACAACTAAAAGTGAACCCTGGGTTTTCCCTCGGTGCCGATGGAATAAATTCTTCAAAAAGTTTTGTTTTTGATGATCTGGCATTCCATAGGAACCATGGAGTCAAGAAAGAAAATGGTTTCTATTCAGTAAAAGACAAGTTGACTTCATTGTATGAAAGGAACAGTATTTATTCATTTGATGTAAATGGTAACATATGTACTTCAAGTTCTAAGCCACTGCAAAGTGACACTGAAGGAGAAACTGGTGAGGGGGATGGATCATCAGATCAGAGACTATTTTCATGTGTCACGTGTGGAATATTAAATTTTTCCTGTGTTGCTATTGTACAGCCTAGAGAACCTGCAGCTAGAAATCTTATGTCAGCTGATTGTAGCTCCTTAAATAACTGGGTTGGTAGTTCAGGACTTTCTGGCAAAAAAGTTCCTGTTTCCCATGAAGATGCAGCTATTCCTGAGCAGAATATGTTTGCAGGATGGTCTGAAAAGAAGAGCCCAACTGGTTTAGATGATGATCTCGTTCAGTCTGCTCGATACCGGCTACAGACTGCAGAACAAAATTATGAGGCCTTGAATACTGACAGAGAAAAAGGCAATACAGCTCTTTCATTGTTGGCTTCAGTATATGGAAATTCTTCTGATTCTGAGGAAGATCATGATGACCCAGATATTGCAGTTAATGGTCATGAATCAAGACTTGATAGGAGAGATGATTTCAGTCGTCAATCTTTTGATTACTCTTTTGAACAACAGGATTATGAAACTGGTTCATGTGTTGCATTTAACAATACGAGGGCAATGCTTAATTCCACCACTAATTGTTCCCCTTATGTTCATGATGCTGAAAAGTTGTTTGTCAAGCCCATGGTTCCCATTGATAACAAAAATGCTTCAGTGGCGCCACATTGTGACGAAGACTCATCCAGAATGCATGTCTTCTGTCTGGAGCATGCTGTAGAAGCAGAGCAGCGACTTCTCCCAATAGGTGGAGCCAACATATTGCTCCTGTGTCATCCAGATTATCCCAAGATAGAGGCTGATGCAAAGCTTGTTTCAGAAGATCTCGGGATTGATTGCATGTGGAAGAATATTGCATATATGCATGCTACCAAAGAGGATGAGGAGAGGATCCAGTTAGCCCTGGATAGTGAGGAGGCTATTCCTGGGAATGGGGACTGGACTGTGAAGCTGGGAATCAATCTTTTTTATAGTGCAAACCTCAGCCGGTCTCCTCTTTATAGTAAGCAGATGCCTTACAATTCTGTTATATATAATGCATTCGGTTATAGCTCTCCTGCAAGTTCACCCGTAGAACCAAAGGTCTATCAGAGAAGGGCCAACAGGCAGAAAAAGGTAGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGGCCAATCAGGTTCATCCCCTTTTGTCAAAAAGAGATTCTGAAGATGTTGAATATAAGAGAAGCTTACATGGGTTTATATTACCTGATGAGAAAATTGAGAGATCGGAAAGTGTCCCTAATAGCGATTCTAATATCAGAAAGTTGGGTAGGAAAAGGAAAATGAATGTAAACAGTGGAAGAAGAGCCAGGAAAGGCAGTCCTGTTGAAAAAGACGTGGTTTCGGATAATTCAACTGAAGACAAACCAAAACAACAGCCAAGGAGGATTCTTAGAAGTAAGCAAGCCAGGCTCAAGGAGAGGGGTGGCGTTGCTTTCGAAGAGGATTATTCTCCTCCCTATCGTCATAGAAAATCTGTAAGCAAGCAAACAAATTGCTCTGGAAGTGATGCAGTTTCTGACGATTCAGTTGATGATGATTATCATAGGCAACATAAGAGTAATGGTCATGTCAAGGAAGCTGAATTTATTGACAATGGTGTGGTTTCAGATGATACAATGCACTATGATGCCAATTGGCAGCAGAGGGGAGAACCTAGCAGCAAGCTAGTTGATGACATAAAGAGAGATGCAAATTCAGAGGATTCATTTGATGATGGTTCTCCCCAGTTTGATAGGGAGAGTCCTGTTGGTGAAGATGTATTTTCCGATGAGGATCGTTGTCCTAAGCAGCGAAGGAGGATTCAAAAAAGCAGGCAATGCAAACAGCTTACAGAAAAAGATGCAGTGATATCTGCTGACCACCTGGAGCAGCACGTGCAGAATCAGCAACGAAGGAATCCTAAAAGCAGGCAAGCCAAATACCGTGGCGGAGAGGATGCTGTATCAGATTGCCAATTGGAAGGCCACACTCGCAAGTATAGAAAGACTCCTAAAGGCAGGCTGGCCAAATGTGTAGAAGGGGAAGATGCAATCTCTGTTGACCAATTGGAGGATCACTTTCAGAACAAGCAAAAGAGTTTTCCTAGAAGGCGGCAAAACAAAGGCATGGATAGGGAAGTTAAAGGTGCATTGTCTGATGACCAATTGGAGGATCTTTCTCAGATGCAGCAAACTAGTCTTTCTAGGAAAAGGCGAAACAAAGGCATTGGAAGAGAAATTAAAGATGTAATGTCTGACGACCAATTGGAGGATCGCCTTCAGAAGCAGAGAAGTTTGCCTAGAAGCAGGCAAAACAAATGCATTGATAGAGAACTAATGGATTACTCGGCAGAAAATATTTCTCATCTGCCCCGTAAAACTCCTAGAAGAAGGCAAGCGAAATGTGTGGAGGAAGATGCTGTAAATTCAGATGAAGTAGTGGTAGGGGATGATTCTCCCCAAGAGCACAAGAAAATTCTTCGAAGTAAGCAATCTAAACATATAAAACAAGCTAGCCTTCTCCGAGTGAAAATCGAGACATCCCAGCATGTAAAACGAGGTGCTCAAACGCTAACGAAAGCAAAAGCTCCTCAGAAAACCAAGCAGCCTCTCCGTTCGAGGAATAAGCAATCTGCTAACTCCAGAGAGTTCAGTTTAAATACGGAAGAGGAGGAAGAAGGGGGACCTAGCACACGACTCAGGAAGAGAGCCCCAAAAGTTGAGTCTGAAGTAAAACCAAAAGAAAAGCCAACCAAAAGGAAAAAGGTGAAGAATGCTACAGCTGCAAAGGTGAAGGATGAGGAAAAAGAATACCAGTGTGACATCGATGGGTGCACCATGAGTTTCGGGACAAAACAGGAACTGTTGAATCACAAGAGAAATATCTGTCCTATAAAAGGGTGTGGGAAGAAGTTTTTCTCACACAAATATCTGGTGCAACACCGGCGAGTTCATGAGGAGGACCGCCCCCTTAAGTGCCCTTGGAAGGGGTGCCAGATGACTTTCAAGTGGGCATGGGCTCGTACTGAACATATTCGAGTCCACACTGGTGAACGACCTTACGTATGTGCTGAGCCAGGCTGTGGGCAAACATTCAGATTTGTGTCTGACTTCAGTCGACATAAGCGAAAGACAGGGCATACATCAAAGAGGTGTCGTTAA 4767 0.4502 MAEPPNGDVFPWLKSLPVAPEYRPTLTEFQDPIAYIFKIEKEASKYGICKIIPPFPPPPKKTAIANFTRSLAARPQQGPDSRPTFTTRQQQIGFCPRRPRPVQRPVWQSGEHYTFQEFEAKAKSFERSYLKKHLHRKGGATGGAGSLSALEAETLFWKATVDKPFSVEYANDMPGSAFSRKCRDDGGGAAALAESAWNMREVSRANGSLLRFMKEEIPGVTSPMVYLAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFATLGEKTTVMSPEVLISAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALALYRIPEGISAEPRSSRLKDKKRSEGETVIKEIFVRDVLQNNDLLHVLSKGSAVVLLPRRSFDISFCSKLRIGSQQLKVNPGFSLGADGINSSKSFVFDDLAFHRNHGVKKENGFYSVKDKLTSLYERNSIYSFDVNGNICTSSSKPLQSDTEGETGEGDGSSDQRLFSCVTCGILNFSCVAIVQPREPAARNLMSADCSSLNNWVGSSGLSGKKVPVSHEDAAIPEQNMFAGWSEKKSPTGLDDDLVQSARYRLQTAEQNYEALNTDREKGNTALSLLASVYGNSSDSEEDHDDPDIAVNGHESRLDRRDDFSRQSFDYSFEQQDYETGSCVAFNNTRAMLNSTTNCSPYVHDAEKLFVKPMVPIDNKNASVAPHCDEDSSRMHVFCLEHAVEAEQRLLPIGGANILLLCHPDYPKIEADAKLVSEDLGIDCMWKNIAYMHATKEDEERIQLALDSEEAIPGNGDWTVKLGINLFYSANLSRSPLYSKQMPYNSVIYNAFGYSSPASSPVEPKVYQRRANRQKKVVAGKWCGKVWMANQVHPLLSKRDSEDVEYKRSLHGFILPDEKIERSESVPNSDSNIRKLGRKRKMNVNSGRRARKGSPVEKDVVSDNSTEDKPKQQPRRILRSKQARLKERGGVAFEEDYSPPYRHRKSVSKQTNCSGSDAVSDDSVDDDYHRQHKSNGHVKEAEFIDNGVVSDDTMHYDANWQQRGEPSSKLVDDIKRDANSEDSFDDGSPQFDRESPVGEDVFSDEDRCPKQRRRIQKSRQCKQLTEKDAVISADHLEQHVQNQQRRNPKSRQAKYRGGEDAVSDCQLEGHTRKYRKTPKGRLAKCVEGEDAISVDQLEDHFQNKQKSFPRRRQNKGMDREVKGALSDDQLEDLSQMQQTSLSRKRRNKGIGREIKDVMSDDQLEDRLQKQRSLPRSRQNKCIDRELMDYSAENISHLPRKTPRRRQAKCVEEDAVNSDEVVVGDDSPQEHKKILRSKQSKHIKQASLLRVKIETSQHVKRGAQTLTKAKAPQKTKQPLRSRNKQSANSREFSLNTEEEEEGGPSTRLRKRAPKVESEVKPKEKPTKRKKVKNATAAKVKDEEKEYQCDIDGCTMSFGTKQELLNHKRNICPIKGCGKKFFSHKYLVQHRRVHEEDRPLKCPWKGCQMTFKWAWARTEHIRVHTGERPYVCAEPGCGQTFRFVSDFSRHKRKTGHTSKRCR* 1589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1509 1588 MobiDBLite consensus disorder prediction 1228 1255 - -
Aev04g1509 1588 Coils Coil 627 654 - -
Aev04g1509 1588 SMART c2h2final6 1556 1582 IPR013087 -
Aev04g1509 1588 SMART c2h2final6 1496 1520 IPR013087 -
Aev04g1509 1588 SMART c2h2final6 1526 1550 IPR013087 -
Aev04g1509 1588 SMART c2h2final6 1473 1495 IPR013087 -
Aev04g1509 1588 Pfam JmjC domain, hydroxylase 224 342 IPR003347 -
Aev04g1509 1588 MobiDBLite consensus disorder prediction 979 1003 - -
Aev04g1509 1588 ProSiteProfiles Zinc finger C2H2 type domain profile. 1496 1525 IPR013087 -
Aev04g1509 1588 ProSiteProfiles JmjN domain profile. 19 60 IPR003349 -
Aev04g1509 1588 MobiDBLite consensus disorder prediction 1032 1047 - -
Aev04g1509 1588 ProSitePatterns Zinc finger C2H2 type domain signature. 1558 1582 IPR013087 -
Aev04g1509 1588 SUPERFAMILY Clavaminate synthase-like 108 381 - -
Aev04g1509 1588 MobiDBLite consensus disorder prediction 1420 1451 - -
Aev04g1509 1588 ProSiteProfiles Zinc finger C2H2 type domain profile. 1526 1555 IPR013087 -
Aev04g1509 1588 PANTHER LYSINE-SPECIFIC DEMETHYLASE 7 1579 - -
Aev04g1509 1588 MobiDBLite consensus disorder prediction 663 685 - -
Aev04g1509 1588 MobiDBLite consensus disorder prediction 1106 1148 - -
Aev04g1509 1588 Gene3D Classic Zinc Finger 1497 1582 - -
Aev04g1509 1588 ProSiteProfiles Zinc finger C2H2 type domain profile. 1556 1587 IPR013087 -
Aev04g1509 1588 SMART JmjN_1 18 59 IPR003349 -
Aev04g1509 1588 MobiDBLite consensus disorder prediction 1274 1306 - -
Aev04g1509 1588 MobiDBLite consensus disorder prediction 1228 1306 - -
Aev04g1509 1588 Gene3D Classic Zinc Finger 1444 1496 - -
Aev04g1509 1588 MobiDBLite consensus disorder prediction 949 1069 - -
Aev04g1509 1588 SUPERFAMILY beta-beta-alpha zinc fingers 1536 1580 IPR036236 -
Aev04g1509 1588 MobiDBLite consensus disorder prediction 1011 1031 - -
Aev04g1509 1588 MobiDBLite consensus disorder prediction 1381 1463 - -
Aev04g1509 1588 SUPERFAMILY beta-beta-alpha zinc fingers 1496 1532 IPR036236 -
Aev04g1509 1588 Gene3D Cupin 12 364 - -
Aev04g1509 1588 MobiDBLite consensus disorder prediction 1050 1069 - -
Aev04g1509 1588 MobiDBLite consensus disorder prediction 1106 1140 - -
Aev04g1509 1588 ProSiteProfiles JmjC domain profile. 191 360 IPR003347 -
Aev04g1509 1588 MobiDBLite consensus disorder prediction 1258 1272 - -
Aev04g1509 1588 MobiDBLite consensus disorder prediction 1385 1419 - -
Aev04g1509 1588 Pfam jmjN domain 20 53 IPR003349 -
Aev04g1509 1588 ProSitePatterns Zinc finger C2H2 type domain signature. 1528 1550 IPR013087 -
Aev04g1509 1588 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 7 1579 - -
Aev04g1509 1588 ProSitePatterns Zinc finger C2H2 type domain signature. 1498 1520 IPR013087 -
Aev04g1509 1588 SMART cupin_9 191 360 IPR003347 -
Aev04g1509 1588 MobiDBLite consensus disorder prediction 1166 1189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1509 Aev-Chr4 10865824 10873298 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1509 1391 1586 C2H2 Transcription Factor Family AT3G48430 55.455 4.22e-67 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev04g1509 JmjC 1.4e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1509 - - gmx:100775271 1999.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1509 04 10865824 10873298 Aev04g1509 04 10865824 10873298 ECH