Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1508 ATGGCGGAGCCGCCAAACGGCGACGTATTCCCGTGGCTGAAGTCGCTGCCGGTGGCGCCGGAATACCGACCAACGCTGACGGAGTTCCAAGATCCGATCGCTTACATTTTCAAAATCGAGAAGGAGGCTTCTAAGTACGGAATCTGTAAGATCATTCCACCCTTCCCTCCACCTCCTAAGAAAACCGCAATCGCCAACTTCACCCGCTCACTCGCCGCCCGGCCCCAACAAGGCCCTGATTCCAGGCCCACATTCACCACTCGCCAGCAGCAGATCGGCTTCTGCCCCCGCCGGCCCAGGCCCGTTCAGAGGCCCGTCTGGCAGAGCGGTGAGCACTACACCTTCCAGGAATTTGAAGCTAAAGCCAAGTCATTCGAGAGAAGCTACCTCAAAAAGCACCTTCACCGGAAAGGAGGGGCTACCGGTGCAGCCGGTAGCCTCTCCGCGCTCGAAGCTGAGACTCTCTTCTGGAAAGCCACCGTTGATAAGCCGTTCTCAGTTGAGTATGCTAATGACATGCCGGGCTCGGCTTTCAGCCGGAAATGCAGGGACGACGGCGATGGTGCGGCTGCTCTGGCGGAGTCTGCGTGGAACATGAGGGAGGTTTCGAGGGCGAATTGCTCGTTGTTGAGGTTCATGAAGGAGGAGATTCCAGGGGTTACGTCGCCGATGGTGTATCTTGCTATGTTGTTTAGCTGGTTCGCTTGGCATGTGGAGGACCATGACTTGCATAGCTTGAATTACCTTCATATGGGAGCTGGCAAGACTTGGTATGGCGTGCCAAGGGATGCTGCTGTGGCGTTCGAGGAGGTGGTTAGGGTTCATGGTTATGGTGGAGAGATAAACCCTCTTGTTACTTTTGCTACTCTTGGTGAGAAAACCACAGTGATGTCGCCTGAAGTATTGATTAGCGCAGGTGTTCCATGCTGCAGGTTAGTTCAAAATGCTGGGGAATTTGTTGTAACATTTCCAAGAGCTTATCACTCAGGGTTTAGTCATGGTTTTAATTGTGCAGAGGCAGCTAACATTGCAACTCCTGAATGGTTGAGAGTTGCTAAAGATGCTGCTATTCGGAGGGCTTCAATCAATTACCCTCCTATGGTTTCTCATTTTCAGTTACTATATGACCTTGCCTTAGCTCTTTATTCTAGAATTCCTGAAGGTATCAGTGCTGAACCACGGAGTTCTCGTCTTAAGGATAAGAAGAGGAGTGAAGGGGAAACTGTAATTAAAGAACTATTCGTTCGGGATGTGTTACAGAACAACAATTTACTTCATGTACTCAGCAAAGGATCTGCTGTAGTACTTCTTCCTCGTAGATCATTTGACATTTCTTTTTGCTCAAAATTACGTATTGGGTCCCAACAACTAAAAGTGAACCCTGGATTTTCCCTCGGTGCTGATGGAATAAATTCCTCAAAAGGTTTTGTTTCTGACGATCTTGCATTCCATAGGAACCATGGAGTCAAGCAAGAAAAAGGTTTCTATTCTGTAAAAGACAAGTTGACTTCATTGTATGAAAGGAACAGTATTTATTCATTTGATGTAAATGGTAACATATGTACTTCAAGTTCTAACCCACTGCAAAGTGACACTGAAGGAGAAACTGGTGAGGGGGATGGATCATCAGATCAGAGACTATTTTCATGTGTCACATGTGGAATATTAAGCTTTTCCTGTGTTGCTGTTGTACAGCCTAGAGAACCTGCAGCTAGAAATCTTATGTCAGCTGATTGTAGCTCCTTAAATAACTGGGTTGGTAGTTCAGGACTTTCTGGTAAAAAAAATCCTGTTTCCCATGAAGATGCAACTATTCCTGAGCCGAATATGTTTGCAGGCAGAGAAAAAGGCAATACAGCTCTTTCATTGTTGGCTTCAGCATATGGAAATTCTTCTGATTCTGAGGAAGATCATGATGACCCAGATATTGCAGTTGATGTTCATGAATCAAGACTTGATAGGAGAGATGATTTCAGTCCTCAATCTTTTGACTACTCTTTTGAGCAACAGGATTATGAAACCGGTTCTGGTCTTGCATCAAACAATACGAGGGCAATGCTTAATTCCACCGCTAATCGTTCCCGTGATGTTCATGATGCTGATAAGTTGTTTGTCAAGCCTATCGTTCCCATTGATAACAAAAATGCTCCATTGGCGCCACATTGTGATGAAGACTCATCCAGAATGCATGTCTTATGTCTGGAGCATGCTGTAGAAGCAGAGCAGCGACTTCGCCCAATAGGTGGAGCCAACATATTGCTCCTGTGTCATCCAGATTATCCCAAGATAGAGGCTGATGCAAAGCTTGTTTCAGAAGATCTGGGGATTGATTGCATGTGGAAGAATATTGCATACACACATGCCACCAAAGAGGATGAAGAGAGGATCCAGTTAGCCCTGGATAGTGAGGAAGCTATTCCTGGGAATGGGGACTGGGCTGTGAAGCTAGGAATCAATCTTTTTTATAGTGCAAACCTCAGCCGTTCTCCTCTTTATAGTAAGCAGATGCCTTACAATTCTGTTATATATAACGCATTCGGCTATAGCTCTCCTTCAAGTTCACCAGTAGAACCAAAGGTCTATCAGAGAAGGGCCAACAGGCAGAAAAAGGTAGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGGCCAATCAGGTTCATCCCCTTTTGTCAAAAAGAGATTCTGAAGATGTTGAAAGTGAGCGAAGCTTACATGGGTTTATATTACCTGATGAGAAAATTGAGAGATCGGAAAGTGTCCCTAAAAGTGAATGTAATATCAAAAAGTTGGGCAGGAAAAGGAAAATTACTGTAAACAGTGGAAGAAGAGCCAGGAAAGGCAGTCCTGTTGAAAAAGATGTGGTTTCGGATAATTCATCTGAAGAAAAACCAAAACAACAGCCAAGGAGGATTCTTAGAAGTAAGCAAGCCAGGCATAATGAGAGGGATGGTGTTGCTTTGGAAGGGGATTATTCTCCTCCCTATCCTCATAGAAAATCTGTAAGCAAGCAAACAAATTGCTCTGGAAGTGATGCAGTTTCTGACGATTTGGTTGATGATGATTATCCTAGGAAACATAAGAGGAACGGTCATGTCAAAGAAGCTGAATTTATTTACAATGGTGTGATTTCAGATGATACAATGCACTATGATTCTGATTGGCAGCAGAGGGAAGAACCTAGGAGCAAGCAAGATGAAGACATAAAGAGAGATGCAAATTCAGAGGATTCAGTGGATGTTGGTTCTCCCCAGTTCCGCAGGGAAAGTCCTGTTGGCGAAGACGTATTTTCCGATGAGGATCATTGTCCTAAGCAGCAAAGGAGGATTCAAAAAAGCAGGCAATGCAAACAGCTTTTAGGAAAAGATGTAATGATTTCTGATGACCATCTGGAGCAGCACGTGAAGAAGCAGAAACGGAGGGTTCCTAAAAGCAGGCAAGCCAAATACCGTGCCGGAGAGGATGCTGTATCAGATTGCCAACTGGAGGGCCACATTCGCAAGTATAGAAAGACTCCTAAAGGCAGGCTGGCCAAATGTGTAGAAGGGGAAGATGCAATGTCTGATGACCAATTGGAGGATCACTTTCAGAAACAGCAAAAGAGTTTTCCTAGAAGGCGGCAAAATAAAGGAATCGATAGGGAAGTTAAAGATGCATTGTCTGATGACCAATTGGAGGACCATTCTCAGATGCTGAAAACTAGCCTTTCTAGGAAAAGGCGAAACAAAGGCATTGAAAGAGAAATTCATGATGTGATATCTGGCGACCATTTGGAGGATTGCTTTCAGAAGCAGAGGAGTTTGCCTAGAAGTAGGCAGAACAAATGCATTGATAGAGAACTGATGGATGACTCAGCAGAAAAGATTTCTCATCTGCCCCGTAAAACTCCTAGAAGAAGGCAAGCTAAATGTGTGGAGGAAGATGCTGTAAATTCAGATGAAGTAGTGGTAGGGGATGATTCTCCACAAGAGCACAAGAAAATTCTTCGAAGTAAGCAATCTAAACCAAAGACACCTAAACAGATAAAACAAGCTAGCCTTCTCCAAGGGAAAAACCAGACAAACCGGTCTGTAAAACGAGGTGCTCAAAAACTATCAAAAGCAAAAGCTCCTCAGAAAACCAAGCAGCCTCTTCGTTCGAGGAATAAGCAATCTGCTAACTCCAGAGAGTTCAGTTTAAATACGGAAGAGGAGGAAGAAGGCGGACCTAGCACACGACTCAGGAAGAGAGCCCCAAAAGTTGAGTCTGAAGTAAAACCAAAAGAAAAGCCAACCAAAAGGAAAAAGGTGAAGAATGCTACAGCTGCAAAGGTGAAGGATGAGGAAAAAGAATACCAGTGTGACATCGATGGGTGCACCATGAGTTTCGGGACAAAACAGGAACTGTTGAATCACAAGAGAAATATCTGTCCTATAAAAGGGTGTGGGAAGAAGTTTTTCTCACACAAATATCTGGTGCAACACCGGCGAGTTCATGACGACGACCGCCCCCTTAAGTGCCCTTGGAAGGGGTGCCAGATGACTTTCAAGTGGGCATGGGCTCGTACTGAACATATTCGAGTCCACACCGGTGCACGACCGTATGTATGTGCCGAGCCCGGCTGTGGGCAAACATTCAGATTTGTGTCTGACTTCAGTCGTCATAAGCGAAAGACAGGGCATACATCAAAGAGGTGTCGTTAA 4680 0.4502 MAEPPNGDVFPWLKSLPVAPEYRPTLTEFQDPIAYIFKIEKEASKYGICKIIPPFPPPPKKTAIANFTRSLAARPQQGPDSRPTFTTRQQQIGFCPRRPRPVQRPVWQSGEHYTFQEFEAKAKSFERSYLKKHLHRKGGATGAAGSLSALEAETLFWKATVDKPFSVEYANDMPGSAFSRKCRDDGDGAAALAESAWNMREVSRANCSLLRFMKEEIPGVTSPMVYLAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFATLGEKTTVMSPEVLISAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCAEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALALYSRIPEGISAEPRSSRLKDKKRSEGETVIKELFVRDVLQNNNLLHVLSKGSAVVLLPRRSFDISFCSKLRIGSQQLKVNPGFSLGADGINSSKGFVSDDLAFHRNHGVKQEKGFYSVKDKLTSLYERNSIYSFDVNGNICTSSSNPLQSDTEGETGEGDGSSDQRLFSCVTCGILSFSCVAVVQPREPAARNLMSADCSSLNNWVGSSGLSGKKNPVSHEDATIPEPNMFAGREKGNTALSLLASAYGNSSDSEEDHDDPDIAVDVHESRLDRRDDFSPQSFDYSFEQQDYETGSGLASNNTRAMLNSTANRSRDVHDADKLFVKPIVPIDNKNAPLAPHCDEDSSRMHVLCLEHAVEAEQRLRPIGGANILLLCHPDYPKIEADAKLVSEDLGIDCMWKNIAYTHATKEDEERIQLALDSEEAIPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNSVIYNAFGYSSPSSSPVEPKVYQRRANRQKKVVAGKWCGKVWMANQVHPLLSKRDSEDVESERSLHGFILPDEKIERSESVPKSECNIKKLGRKRKITVNSGRRARKGSPVEKDVVSDNSSEEKPKQQPRRILRSKQARHNERDGVALEGDYSPPYPHRKSVSKQTNCSGSDAVSDDLVDDDYPRKHKRNGHVKEAEFIYNGVISDDTMHYDSDWQQREEPRSKQDEDIKRDANSEDSVDVGSPQFRRESPVGEDVFSDEDHCPKQQRRIQKSRQCKQLLGKDVMISDDHLEQHVKKQKRRVPKSRQAKYRAGEDAVSDCQLEGHIRKYRKTPKGRLAKCVEGEDAMSDDQLEDHFQKQQKSFPRRRQNKGIDREVKDALSDDQLEDHSQMLKTSLSRKRRNKGIEREIHDVISGDHLEDCFQKQRSLPRSRQNKCIDRELMDDSAEKISHLPRKTPRRRQAKCVEEDAVNSDEVVVGDDSPQEHKKILRSKQSKPKTPKQIKQASLLQGKNQTNRSVKRGAQKLSKAKAPQKTKQPLRSRNKQSANSREFSLNTEEEEEGGPSTRLRKRAPKVESEVKPKEKPTKRKKVKNATAAKVKDEEKEYQCDIDGCTMSFGTKQELLNHKRNICPIKGCGKKFFSHKYLVQHRRVHDDDRPLKCPWKGCQMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHTSKRCR* 1560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1508 1559 ProSitePatterns Zinc finger C2H2 type domain signature. 1499 1521 IPR013087 -
Aev04g1508 1559 MobiDBLite consensus disorder prediction 1132 1154 - -
Aev04g1508 1559 MobiDBLite consensus disorder prediction 1391 1422 - -
Aev04g1508 1559 MobiDBLite consensus disorder prediction 998 1012 - -
Aev04g1508 1559 ProSiteProfiles Zinc finger C2H2 type domain profile. 1467 1496 IPR013087 -
Aev04g1508 1559 ProSiteProfiles JmjN domain profile. 19 60 IPR003349 -
Aev04g1508 1559 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 7 1082 - -
Aev04g1508 1559 SUPERFAMILY beta-beta-alpha zinc fingers 1507 1551 IPR036236 -
Aev04g1508 1559 MobiDBLite consensus disorder prediction 1050 1076 - -
Aev04g1508 1559 SMART JmjN_1 18 59 IPR003349 -
Aev04g1508 1559 MobiDBLite consensus disorder prediction 1017 1032 - -
Aev04g1508 1559 MobiDBLite consensus disorder prediction 1091 1107 - -
Aev04g1508 1559 ProSiteProfiles Zinc finger C2H2 type domain profile. 1527 1558 IPR013087 -
Aev04g1508 1559 ProSiteProfiles JmjC domain profile. 191 360 IPR003347 -
Aev04g1508 1559 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 1228 1550 - -
Aev04g1508 1559 MobiDBLite consensus disorder prediction 1368 1390 - -
Aev04g1508 1559 Gene3D Classic Zinc Finger 1415 1467 - -
Aev04g1508 1559 MobiDBLite consensus disorder prediction 1312 1432 - -
Aev04g1508 1559 ProSitePatterns Zinc finger C2H2 type domain signature. 1529 1553 IPR013087 -
Aev04g1508 1559 SUPERFAMILY Clavaminate synthase-like 108 377 - -
Aev04g1508 1559 Gene3D Classic Zinc Finger 1468 1551 - -
Aev04g1508 1559 ProSiteProfiles Zinc finger C2H2 type domain profile. 1497 1526 IPR013087 -
Aev04g1508 1559 MobiDBLite consensus disorder prediction 936 1032 - -
Aev04g1508 1559 Gene3D Cupin 12 364 - -
Aev04g1508 1559 Pfam jmjN domain 20 53 IPR003349 -
Aev04g1508 1559 SMART cupin_9 191 360 IPR003347 -
Aev04g1508 1559 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1228 1550 - -
Aev04g1508 1559 PANTHER LYSINE-SPECIFIC DEMETHYLASE 7 1082 - -
Aev04g1508 1559 ProSitePatterns Zinc finger C2H2 type domain signature. 1469 1491 IPR013087 -
Aev04g1508 1559 SMART c2h2final6 1527 1553 IPR013087 -
Aev04g1508 1559 SMART c2h2final6 1444 1466 IPR013087 -
Aev04g1508 1559 SMART c2h2final6 1467 1491 IPR013087 -
Aev04g1508 1559 SMART c2h2final6 1497 1521 IPR013087 -
Aev04g1508 1559 MobiDBLite consensus disorder prediction 1337 1360 - -
Aev04g1508 1559 MobiDBLite consensus disorder prediction 1185 1227 - -
Aev04g1508 1559 SUPERFAMILY beta-beta-alpha zinc fingers 1467 1503 IPR036236 -
Aev04g1508 1559 MobiDBLite consensus disorder prediction 1049 1115 - -
Aev04g1508 1559 MobiDBLite consensus disorder prediction 945 986 - -
Aev04g1508 1559 Pfam JmjC domain, hydroxylase 224 342 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1508 Aev-Chr4 10854619 10862038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1508 1362 1557 C2H2 Transcription Factor Family AT3G48430 56.364 5.75e-68 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev04g1508 JmjC 4.5e-37 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1508 - - gmx:100775271 2030.37