Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1505 ATGGTTGGAAATTCGCCACGAGAAGCGTGTCCCGAATGCACCCATCACTGTGCATTGTTTCATAGAAAAGGGGAAAGTTCATCCTCCTCTTCTTCATCCTCGTCTTGTTCAACCACTTTCTTCAAGGTCATGCTTGGTGATGACTTCTCCAGAATTTTGTATTTTCCTCCTAAGTTTTGTCGTACTGTGTCGAACTTGATTGATGAGAAAATCATTCTGGTGGATTCTAGTGGGAACCAATGGAATTCAAGAGTATCAACTGTTGGTGGTTCTCTTGCTCTTGAGGAAGGGTGGAATAAATTTTCATTGGATCATGGACTTGAAGTTGGAGATTTTCTGGTATTCAATTTCGTTAGTGAATCGCATTTAGATGTTATAATCTTTGATAGGTCAGGGTGTGTGAGGAATGATTTTTCTAAGAGAAAAAATAAGAGAAAAAGGAGTATAGGCAGAAGTGGAAGTGGCTCTTCTGATAGAGATGCTTTGTTTGTTAGACAAGGTCCAAATACAACCGTTGTTCCCGAGCCTGATTCGCGGAAAATAGATAGCCGGAACAGGGAGGAGGATGTAGGAGGAACACAAAACAACATGGAGAATATTACAAACTATGATAAGAGCAATGGTAGTGCTCAATCTTTGCCTCTGGAAGACAACCATGAAGGTCTGTGTCAAATGACAAGCCAAGATGACCACGGTGTAAATGGGACTGGGAAAATTACAACCGGAGAATCAAAAGTTTCTCGTGTTGATTATGGATCCCATGTTCATCAAAATGATGCAACTCCGCGAAACATTCCTCCTTTAATTGAAGGGATATTGGGTAGTGGTGGCAGTACTTCAAATGCCGTGGAAGCTAAATTGTCTGGAAAAAATAATACTCATAGAGATACTGACAGAAGTACATGTAACAAGATTTCTACTTCAACACCTGAAGAAAGCAGAAAGAACAATTTTATTAAGTCCAAAGGGGAAGTTCAAGAATGCCAATTTGCTACTGACAGAAGTGTAAATAACAATACTTCTACTTTGAAACTTGATGAAGACAGAAAGAACAATTATGCTAAGTCCAACCAGGAAGTTCAAGGGTGCCAATTTGCTAAGGGCATAGAAAGTGATCAGGTGATGGGATCCAAGAAAAAGCATGAATTGCATGTTGACAGTCATCCCAACACCAAACAGATGTCCAATGACACAGTAAATATCTCAGATGATATCTACAAAGGTGAAACGTCAAAAAGGATTAAGCAAGAGCCTGCACTGCTGCCTGATCCAGGAATGACTCGCAGTGGGATCTATTTCAAGGCCAAATTTCGTGCAAAAGGTGAAATGTCTAAAACAATTAAAAAGGAGCTTCATATGGGCGTGACTACCAATGTGCCGAGTTCCAACTATGAGTTGGGAGCAACAGGGTCTGCGAAGGCTATCAAGAAAGATTTGGTTGAGATCTTTGGCATGATCGATCAAGATCAAGATCAAGATTACGATGATGATAATGTGGACATTAAAACATCAGCCTCCATCTCCTGTGTGGTGCCCACAGACAGTGATAATTCTCTTGAATTGCCGACATGCTTGCCTCATTGTGGAAGAATAACTATGGAGAGGATGGTGGTGTTCCTTCGTAATCCAAAGGATCCAAGGAAGAACCTGTGGCCGGTGCTTTACCATGAACGACGAATGTTAAAAATTCTGGCATCAGGATGGTCACATTTTTGCAGGGCGAATAGCATTCGGCCAGCAGATGTGTGTACTTTTGAGCTCGAGGACAAGTCCAAACGCATCTTCACTGTAGATATAGTCCACAATTGA 1809 0.4124 MVGNSPREACPECTHHCALFHRKGESSSSSSSSSSCSTTFFKVMLGDDFSRILYFPPKFCRTVSNLIDEKIILVDSSGNQWNSRVSTVGGSLALEEGWNKFSLDHGLEVGDFLVFNFVSESHLDVIIFDRSGCVRNDFSKRKNKRKRSIGRSGSGSSDRDALFVRQGPNTTVVPEPDSRKIDSRNREEDVGGTQNNMENITNYDKSNGSAQSLPLEDNHEGLCQMTSQDDHGVNGTGKITTGESKVSRVDYGSHVHQNDATPRNIPPLIEGILGSGGSTSNAVEAKLSGKNNTHRDTDRSTCNKISTSTPEESRKNNFIKSKGEVQECQFATDRSVNNNTSTLKLDEDRKNNYAKSNQEVQGCQFAKGIESDQVMGSKKKHELHVDSHPNTKQMSNDTVNISDDIYKGETSKRIKQEPALLPDPGMTRSGIYFKAKFRAKGEMSKTIKKELHMGVTTNVPSSNYELGATGSAKAIKKDLVEIFGMIDQDQDQDYDDDNVDIKTSASISCVVPTDSDNSLELPTCLPHCGRITMERMVVFLRNPKDPRKNLWPVLYHERRMLKILASGWSHFCRANSIRPADVCTFELEDKSKRIFTVDIVHN* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1505 602 MobiDBLite consensus disorder prediction 177 191 - -
Aev04g1505 602 CDD B3_DNA 515 599 IPR003340 GO:0003677
Aev04g1505 602 MobiDBLite consensus disorder prediction 289 315 - -
Aev04g1505 602 SUPERFAMILY DNA-binding pseudobarrel domain 513 598 IPR015300 -
Aev04g1505 602 Gene3D - 32 133 IPR015300 -
Aev04g1505 602 MobiDBLite consensus disorder prediction 192 214 - -
Aev04g1505 602 ProSiteProfiles B3 DNA-binding domain profile. 38 131 IPR003340 GO:0003677
Aev04g1505 602 MobiDBLite consensus disorder prediction 144 215 - -
Aev04g1505 602 ProSiteProfiles B3 DNA-binding domain profile. 538 602 IPR003340 GO:0003677
Aev04g1505 602 SMART B3_2 509 598 IPR003340 GO:0003677
Aev04g1505 602 SMART B3_2 40 131 IPR003340 GO:0003677
Aev04g1505 602 SUPERFAMILY DNA-binding pseudobarrel domain 34 133 IPR015300 -
Aev04g1505 602 CDD B3_DNA 40 129 IPR003340 GO:0003677
Aev04g1505 602 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 25 600 IPR044837 -
Aev04g1505 602 Pfam B3 DNA binding domain 544 599 IPR003340 GO:0003677
Aev04g1505 602 Pfam B3 DNA binding domain 40 130 IPR003340 GO:0003677
Aev04g1505 602 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0905400-LIKE ISOFORM X1 25 600 - -
Aev04g1505 602 Gene3D - 499 602 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1505 Aev-Chr4 10807581 10810962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1505 29 136 B3 DNA Binding Superfamily AT4G01580 29.358 1.53e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev04g1505 B3 2.2e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1505 - - adu:107478866 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1505 04 10807581 10810962 Aev04g1505 04 10807581 10810962 ECH