Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1483 ATGGCTTCTACTAGTTGTGCTTCTTCTCTCTTACTCTGTCCTTACAACCTTCGTTTCCGCCCAAAACCAACAACATCCCTTTCCGTTTCTCGCTCTGTTCGCTCTTCTGCGCTCCCAGGTACTGATGGAACTCAATCACCCCGCAAAAGGACGAGAAGGATAGAAGGTCCTCGAAAAAGCATGGAAGACTCTGTTCAGCGCAAGATGGAGCAATTTTACGAAGGATCTGATGGGCCGCCGCTCCGTGTTCTTCCTATTGGCGGGCTCGGTGAAATTGGGATGAATTGCATGCTTGTCGGGAACCATGACCGCTATATCCTTATTGATGCTGGAGTCATGTTTCCAGACTATGATGAACTTGGAGTCCAAAAGATTATACCGGATACAACATTCATAAAGAAATGGAGCCACAAAATTGAAGCACTTGTTATAACACATGGACATGAAGATCATATTGGTGCATTGCCTTGGGTCATTCCAGCATTGGATTCTAACACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATCAAAAAACGTTTAAAGGAGCATGGTATGTTTTTTCCATCTAGACTCAAGATATTTAGAACTAAGAAGAAGTTTATGGCTGGGCCATTTGAGATTGAACCTATCAGGGTGACCCATTCTATCCCTGATTGTTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGGGACTGGAAGATTGATGAGACACCATTGGATGGAAAAGTTTTTGATCGTGAGGCTTTAGAGGAACTTTCCAAAGAAGGAGTAACACTGATGATGAGTGATTCAACAAATGTACTATCACCTGGAAGAACAACAAGTGAATCAGTTGTGAAAGATGCATTATTGAGGCATATTTCAGCTTCTAAAGGAAGGGTTATTACAACCCAGTTTGCATCTAATCTGCATCGGCTTGGAAGTGTGAAAGCTGCAGCTGATTTAACTGGCCGAAAGCTGGTATTTGTTGGCATGTCTTTAAGGACATATTTAGATGCAGCATGGAGGGATGGGAAGGCTCCAATTGATCCATCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCTCCAAAGGATCTGCTAATTGTAACAACAGGATCTCAAGCAGAACCACGTGCTGCCTTGAATCTTGCATCTTATGGAAGTAGTCATGCTTTCAAACTAACTAAGGAAGACGTTGTTTTGTATTCAGCTAAGGTTATTCCTGGTAATGAGTCTCGTGTGATGAAAATGCTAAACCGCATATCAGAGATTGGATCAACAATAGTGATGGGTAAAAATGAAGGTCTGCACACATCTGGCCATGCGTATCGCGGAGAACTGGAAGAAGTATTAAGAATAGTGAAGCCACAACATTTTCTTCCAATACATGGAGAACTCTTGTTCCTGAAGGAGCATGAATTACTTGGAAAGTCAAATGGTGTTCGGCACACTGCTGTTATTAAAAATGGAGAGATGCTTGGTGTTTCACATTTAAGAAATAGAAGAGTCCATTCTAATGGTTTCATTTCCCTTGGAAAAGAGAATTTACAGTTGAAGTATAGTGATGGTGACAGAGCATTTGGTACATCAAGTGAACTCTTCATTGATGAAAGATTGAAAATTGCATTGGATGGCATCATTGTGATTAGCATGGAAGTATGTCGCCCTCAGGCAGACAATTTGGCTGAAAACACCTTAAAAGGGAAGATACGGATTACCACAAGATGCCTATGGCTGGACAAAGGGAAGCTATTGGATGCACTCCATAAAGCTGCTCATGCTGCTCTTTCAAGCTGCCCTGTAAATTGTCCACTTGCTCACATGGAAAGAACTGTGGCCGAGGTGTTGAGGAAGATGGTGAGGAAGTACAGTGGTAAACGGCCTGAAGTTATTGCCATTGCTATAGAAAATCCTGCTGCTGTTCTTGCTGATGAGATAAGCACAAAGTTGTCGGGCAAATCCCATTTGAGTACCGGAATACCGACACTAAGAAAGGTAGTGGATGGACACCGGAAAGAAAGCCAGCCCACCACTATGCAAATAAGAGATGATGGCCTTGATGTTGAAGGACTTCTACCTGAAGATGACACCAGTAGTACCGCTACATCGAGTGGAGCCGTGGGTGATTCATTGGAATCAGAGGATTCAGATGAGTTTTGGAAGCCATTTATTGCATCCTCACATTCTGAGAAGTCAATCGAAGCTAACAATGGTTATGTTTCACGAAAGGGGAACAAGTCCAATCTCAAGAAAGATGATTCTGAAGACACTGGTGAAGCCAACTCGGAAAAGGCGCCTAATTCTGAACCCAAGTCTTCAAAGTCAGTGAAGAGAAATAAATGGAAATCTGAAGAAGTAAAGAAGCTGATTGGCATGCGTGGGGAACTAGATGATAGGTTTCAAATTGTGAAAGGAAGGATGGCTCTCTGGGAAGAGATATCTCAGAACTTGTCGGCTGACGGGATAAGCAGAAGTCCTGGACAGTGTAAATCGCTTTGGACGTCGCTGGTACAAAAATATGAGGAGATCAAGAATGAGAAGGATAGCAAGAGCAGTTGGCAATATCTTGAAGACATGAAAAGGGTAATCCCTGATAGCGAAGCAATGGCAACAAAATGA 2625 0.4263 MASTSCASSLLLCPYNLRFRPKPTTSLSVSRSVRSSALPGTDGTQSPRKRTRRIEGPRKSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIKKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKRLKEHGMFFPSRLKIFRTKKKFMAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTTSESVVKDALLRHISASKGRVITTQFASNLHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWRDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLTKEDVVLYSAKVIPGNESRVMKMLNRISEIGSTIVMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSNGVRHTAVIKNGEMLGVSHLRNRRVHSNGFISLGKENLQLKYSDGDRAFGTSSELFIDERLKIALDGIIVISMEVCRPQADNLAENTLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVAEVLRKMVRKYSGKRPEVIAIAIENPAAVLADEISTKLSGKSHLSTGIPTLRKVVDGHRKESQPTTMQIRDDGLDVEGLLPEDDTSSTATSSGAVGDSLESEDSDEFWKPFIASSHSEKSIEANNGYVSRKGNKSNLKKDDSEDTGEANSEKAPNSEPKSSKSVKRNKWKSEEVKKLIGMRGELDDRFQIVKGRMALWEEISQNLSADGISRSPGQCKSLWTSLVQKYEEIKNEKDSKSSWQYLEDMKRVIPDSEAMATK* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1483 874 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 438 468 IPR011108 -
Aev04g1483 874 MobiDBLite consensus disorder prediction 697 712 - -
Aev04g1483 874 Pfam Myb/SANT-like DNA-binding domain 780 863 IPR044822 -
Aev04g1483 874 Gene3D - 282 432 IPR042173 -
Aev04g1483 874 ProSiteProfiles Myb-like domain profile. 775 839 IPR001005 -
Aev04g1483 874 CDD GT1 781 846 - -
Aev04g1483 874 MobiDBLite consensus disorder prediction 670 717 - -
Aev04g1483 874 SUPERFAMILY Metallo-hydrolase/oxidoreductase 81 495 IPR036866 -
Aev04g1483 874 MobiDBLite consensus disorder prediction 737 782 - -
Aev04g1483 874 SMART Lactamase_B_5a 93 293 IPR001279 -
Aev04g1483 874 PANTHER RIBONUCLEASE J 7 874 - -
Aev04g1483 874 Gene3D - 85 497 IPR036866 -
Aev04g1483 874 MobiDBLite consensus disorder prediction 26 65 - -
Aev04g1483 874 Gene3D - 783 844 - -
Aev04g1483 874 MobiDBLite consensus disorder prediction 26 45 - -
Aev04g1483 874 Pfam Beta-lactamase superfamily domain 104 240 IPR001279 -
Aev04g1483 874 MobiDBLite consensus disorder prediction 747 764 - -
Aev04g1483 874 MobiDBLite consensus disorder prediction 46 65 - -
Aev04g1483 874 CDD RNaseJ_MBL-fold 84 495 - -
Aev04g1483 874 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 7 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1483 Aev-Chr4 10595088 10601573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1483 782 865 Trihelix Transcription Factor Family AT2G38250 36.047 2.04e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aev04g1483 Lactamase_B_2 9e-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1483 - - gmx:100783850 1420.6