Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1480 ATGGTGTCGACGAGACGCAACAGTGGATCTCTCTCTGCAAACAACACCAAACGATCTTCGTCCTCCGAAGACAAAGACAAACCTCCTTCTTCTCCTTCACCTAAGCGCCACAAGGGTGACGGTGGTGGTGGTGGTGGCACGTCGGAGAAACCGGCGCCGCCGGCACCAGCGGAGAATTCGAAGGAATTGCGAGCTCCAGAGGTAGCTGCCGATCCCGGAGAATGCGGCACTGGTGATGCTAAGATCGCCGGCAACGACGGAAAGGCCGATTCCGAGCCGGCCGTGCCTGTGACGGGGCCGATCGCTGATGGTTCTTCGCCGAGCTTGGCAGCTAATAAACCAAGGGGTTCTTTCACTTCGTGGAGTATATATCAGAAGCAAAATCCGAACTTTGAGGGTTCAGTTCCCTGGTGCAAGCTCTTGTCCCAATTTTCACAGAATCCAAATGTTTTGATTTGCCCAGCGAATTTCACGATTGGTTCTAGCAGGCATTCCAACTTCCCATTGAAGGATCAGGCTATAAGTGGAACTTTGTGCAAGATCAAGCATACCCAGTGCGAGGGGAATGCTGTAGCTGTGCTAGAAAGTACGGGCAGCAAAGGATCCGTGCTAGTGAATGGGACGCTTGTCAAGAAGAATACCAGCTGTGTGCTCAACTCTGGCGATGAGGTGGTTTTTGGTTTGATGGGAAATCATGCTTACATTTTTCAGCAACTTAATACTGAAGCTGCAGTTAAGGGTGCAGAAGTTCATAGTGGTGCTGGGAAGTTCCTGCCTGTTGAGAGGAGAGCTGGAGACCCTTCAGCTGTAGCTGGGGCTTCTATTTTGGCTTCTCTGTCTAGCCTCAGGCAGGATCTTTCAAGATGGAAGTCTCCATCTCAGTCTGCCAGTAAACCTCACCGGGCCACTGATGTTTCTAGTCATTCTGCGCTGAATGATGGTACAGAAAATGAACTTGATGGCCTGGAAGGAAACTCAGCTCCAAACGAAGGGACTGATAAAGCTGCTGAAGTTGGAGCAAGTGAAAAGAATTCTCCTATGGATTGCGATCCAGATGATGCAGGCACAGAGGCAGGCAATGTGTTGGAAGAAAGAAATGGGACGAGGGATACACAAGCTGCTGCTGCATCATCTTTGGGTTCATCTGTGCGCTGTGCAGTTTTTAAAGATGATGTTCATGCTGCTATACTGGATGCGAAAGATATAGAAGTCTCCTTTGACAGCTTCCCATATTATTTGAGTGAGAACACAAAAAATGTCCTGATTGCAGCTTGCTTTATACACTTGAAGGATAAAGAACATGTAAAGTACTCAACAGATTTTACAACTATAAACCCTCGAATTCTGCTATCAGGTCCCGCAGGGTCAGAAATATATCAGGAAATGTTGGTAAAAGCACTTGCAAAATACTTTGACGCTAAATTGCTCATATTTGATAGCCACTTGCTTTTGGGTGGTTTATCTTCCAAGGAAGCTGAGCTGCTCAAAGATGGATTTAATGCTGAGAAATCTTGCAGCTGCACAAAACAAAGTTCTACAGTTGCAGACGTGGCTCGGGGTGTGGATCCATCAATTAGTGAAACAGATACACCTAGCTCTTCGAATGCACCTACTCCATATGGCCTTGAGTCTCAAGCTAAGTTGGAAATTGATAGTGTACCATCTACTTCCGGGACAGCTAAAAGTGGCACGTTTAAACTGGGTGACAGGGTAAAATATAGCTTTTCATCTTCTGGTAGCCTGTATCAGACATCTGCGAGGTACAGGGGCCCACCTAATGGAAGTCGGGGGAAGGTTGTATTGCTCTTTGATGATAATCCATTGTCGAAAGTTGGTGTAAGATTTGATAAACCCATACCAGATGGAGTTGATCTTGGAGGTGCGTGTGAGGGAGGTCAAGGATTTTTCTGCAATGCCAGTGATCTTCGCTTGGAAAACACTGGTATTGAAGAACTGGACAAATTACTTATTAATACGTTGTTTGAGGTTGTGCATAATGAGAGCAGAAGTGTGCCTTTCATTTTGTTCATGAAAGATGCAGAGAAGTCTATAGTAGGAAATGGAGATCCAGTTTCCTTTAGAAGTAAGCTTGAAAAGCTTCCAGACAATGTGGTGGTAATAGGTTCACACACTCACACTGACAGTCGAAAAGAGAAGGCACATCCTGGAGGTTTGCTTTTTACAAAGTTTGGCAGCAATCAGACTGCCCTTCTTGACTTGGCTTTCCCAGATAGTTTTGGAAGATTGCATGACAGAGGAAAGGAAGTCCCAAAGCCAAACAAAACTTTGACTAAGCTTTTCCCAAATAAAGTTATAATTCATATGCCTCAGGATGAGGCACTTCTGGCATCTTGGAAGCAGCAACTTGATCGTGATGTTGAAACTCTCAAAATCAAAGGAAATTTGCATCATTTGCGCACGGTTTTGAGCCGCTGTGGGATGGAATGTGAAGGACTTGAGACGGTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCGGAGAAGATAGTTGGTTGGGCTTTAAGTCATCACCTCATGCACAATTCTGAAGCTGATCCTGGTGCAAAGATTGTTTTGTCTTGTGAGAACATCCAGTATGGAATTGGGATCTTACAGGCTATACAGAATGAGTCGAAGAGCCTGAAGAAGTCTCTTAAGGATATTGTGACAGAAAATGAGTTTGAAAAGAGGCTTCTGGGAGATGTTATTCCGCCTAGTGACATTGGTGTTACTTTTGATGACATTGGAGCTCTTGAACATGTTAAGGATACATTGAAGGAATTGGTGATGCTTCCTTTACAAAGACCTGAACTTTTTTGCAAGGGGCAATTAACCAAGCCATGCAAGGGCATCTTATTATTTGGTCCTCCTGGGACAGGCAAGACAATGCTTGCAAAGGCAGTTGCTACTGAGGCGGGTGCAAACTTCATCAATATTTCCATGTCAAGCATCACATCCAAGTGGTTTGGTGAGGGTGAGAAATATGTGAAAGCTGTTTTCTCCTTGGCAAGTAAAATTGCACCCAGTGTTATATTTGTTGATGAGGTCGATAGCATGTTGGGCCGGAGAGAAAATCCCGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAACTGGGATGGTTTACGTACAAAGGATACCGAGCGTGTTCTTGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATACGGAGGCTACCACGGAGATTAATGGTAAGCTTGCCAGATGCACCAAATAGAGCAAAGATCTTAAAAGTGATACTGGCAAAAGAGGACTTGTCTCCTGATGTTGATCTAAATGCAGTTGCAAGTATGACCGATGGATATTCTGGAAGCGATCTCAAGAATTTGTGTGTAACTGCTGCACACCGTCCAATTAAAGAGATATTAGAAAAGGAGAAAAAGGAACAAGCTGCTGCTCTAGCAGAAGGTAGACCTGCTCCAGCATTAAGTGGAAGTGACGATATCCGGCCTCTAAACATGGAAGACTTTAAGCATGCTCATCAACAGGTGTGTGCAAGTGTTTCGTCTGAATCGATTAACATGACTGAGCTCTCACAATGGAATGATCTATACGGCGAAGGTGGATCGAGAGTAAAGAAATCACTGAGCTACTTCATGACTTGCTGCCGAGCCATTCTGCTTGTAAAACGAAAGCATAGGTTTTTTCCGAAAGAAGTGGAGCCCCTTTCAGAATTTTGGCCTGGCTCTGCTGCTTTTAATTTTGTTCCTTATCCCCCCTCTTGGTCCCCCAGCAAAGAAGATGATGCATGTTGA 3804 0.4501 MVSTRRNSGSLSANNTKRSSSSEDKDKPPSSPSPKRHKGDGGGGGGTSEKPAPPAPAENSKELRAPEVAADPGECGTGDAKIAGNDGKADSEPAVPVTGPIADGSSPSLAANKPRGSFTSWSIYQKQNPNFEGSVPWCKLLSQFSQNPNVLICPANFTIGSSRHSNFPLKDQAISGTLCKIKHTQCEGNAVAVLESTGSKGSVLVNGTLVKKNTSCVLNSGDEVVFGLMGNHAYIFQQLNTEAAVKGAEVHSGAGKFLPVERRAGDPSAVAGASILASLSSLRQDLSRWKSPSQSASKPHRATDVSSHSALNDGTENELDGLEGNSAPNEGTDKAAEVGASEKNSPMDCDPDDAGTEAGNVLEERNGTRDTQAAAASSLGSSVRCAVFKDDVHAAILDAKDIEVSFDSFPYYLSENTKNVLIAACFIHLKDKEHVKYSTDFTTINPRILLSGPAGSEIYQEMLVKALAKYFDAKLLIFDSHLLLGGLSSKEAELLKDGFNAEKSCSCTKQSSTVADVARGVDPSISETDTPSSSNAPTPYGLESQAKLEIDSVPSTSGTAKSGTFKLGDRVKYSFSSSGSLYQTSARYRGPPNGSRGKVVLLFDDNPLSKVGVRFDKPIPDGVDLGGACEGGQGFFCNASDLRLENTGIEELDKLLINTLFEVVHNESRSVPFILFMKDAEKSIVGNGDPVSFRSKLEKLPDNVVVIGSHTHTDSRKEKAHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVIIHMPQDEALLASWKQQLDRDVETLKIKGNLHHLRTVLSRCGMECEGLETVCIKDQTLTNENAEKIVGWALSHHLMHNSEADPGAKIVLSCENIQYGIGILQAIQNESKSLKKSLKDIVTENEFEKRLLGDVIPPSDIGVTFDDIGALEHVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVSLPDAPNRAKILKVILAKEDLSPDVDLNAVASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKEQAAALAEGRPAPALSGSDDIRPLNMEDFKHAHQQVCASVSSESINMTELSQWNDLYGEGGSRVKKSLSYFMTCCRAILLVKRKHRFFPKEVEPLSEFWPGSAAFNFVPYPPSWSPSKEDDAC* 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1480 1267 MobiDBLite consensus disorder prediction 522 541 - -
Aev04g1480 1267 Gene3D - 1084 1178 - -
Aev04g1480 1267 MobiDBLite consensus disorder prediction 525 541 - -
Aev04g1480 1267 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 80 1216 - -
Aev04g1480 1267 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 911 1192 IPR027417 -
Aev04g1480 1267 MobiDBLite consensus disorder prediction 1 18 - -
Aev04g1480 1267 SMART AAA_5 948 1085 IPR003593 -
Aev04g1480 1267 MobiDBLite consensus disorder prediction 1 110 - -
Aev04g1480 1267 MobiDBLite consensus disorder prediction 288 359 - -
Aev04g1480 1267 Gene3D - 136 245 - -
Aev04g1480 1267 Pfam FHA domain 158 227 IPR000253 GO:0005515
Aev04g1480 1267 Coils Coil 872 892 - -
Aev04g1480 1267 MobiDBLite consensus disorder prediction 19 34 - -
Aev04g1480 1267 ProSitePatterns AAA-protein family signature. 1055 1074 IPR003960 GO:0005524|GO:0016887
Aev04g1480 1267 SUPERFAMILY SMAD/FHA domain 136 232 IPR008984 GO:0005515
Aev04g1480 1267 CDD FHA 157 237 IPR000253 GO:0005515
Aev04g1480 1267 CDD AAA 950 1083 - -
Aev04g1480 1267 Pfam ATPase family associated with various cellular activities (AAA) 952 1081 IPR003959 GO:0005524|GO:0016887
Aev04g1480 1267 Pfam AAA+ lid domain 1105 1140 IPR041569 -
Aev04g1480 1267 Gene3D - 910 1191 IPR027417 -
Aev04g1480 1267 MobiDBLite consensus disorder prediction 288 314 - -
Aev04g1480 1267 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 80 1216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1480 Aev-Chr4 10576186 10584631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1480 911 1160 Calmodulin-binding Proteins AT3G56690 40.467 6.78e-42 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1480 - - gmx:100780098 1916.35