Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1479 ATGATAGAGCCGTTATCCGAGTTGGAAGCGATGGTCATCATCCCTGTAAAAAGGGAAGTCAGGTACTCTGCGAAGGTACCCACTCCCGCTTTGGTGAAGGAAGCTAGAGATCCACAGCTTGAAAAAAAGGTTATCACAATTTTTTCAGCAAAGATGGCAGTCACATTGTATAACCCTAACTCTGAAGCTGGCTTGAAGAAGCTCAATGAGTATCTTCTTCCCCGTAGTTACATCACTGGGTACCAAGCATCAAAAGATGATGTTACTGTGTATGGAGCGTTCTCTAAGCCTCCATCTGATGAGTATGTGAATGTGTCAAGGTGGTACAAGCACATTGACGCTTTGCTGAGGATTTCAGGTGTTACTGGTGAGGGATCTGGTGTCACTGTGGAATCTTCTCTTGTTGCTGACGATGATATCGCCACTCCTCCACCTGCTGACACTAAGGCTGCTGCTGCCGATGATGATGACGATGATGATGTGGATCTCTTTGGTGAAGAGACTGAGGAAGAGAAGAAGGCTGCTGAGGAGCGCGCTGCTGCTGTGAAGGCTGCCGGAAAGAAGAAAGAGTCTGGGAAATCATCTGTTCTGTTGGATGTGAAGCCATGGGACGATGAAACTGACATGAAGAAGCTCGAAGAAGCCGTGAGGGGTGTTCAGATGGATGGATTGCTTTGGGGTGCATCCAAACTTGTTCCTGTTGGGTATGGTATCAAGAAGTTGCAAATTATGCTTACTATTGTGGATGACCTTGTCTCTGTCGACACTCTCATTGAGGAACATCTTACTGTTGAGCCCATCAATGAATTTCAGCAGAAGCAATTTGCAAGAATGAATAACCAAGGAAGGAATTTTCCACCACCAAAGCAACCACACCAATCCAATCCTCATCAGATTCCAGAGGCTTTAGCATTATTACTTGCTCAACAATCTCAGTATGTACAAGCTCATCATGGCCAATCTCAACAAATCATACAAGCTCAAGCACAATCCATTGCTCAATTGCACAATGCCAATGTTATAGCTAATGCCATTTCTAGTGCTAATGCTAATGCTAATCCCAATATTGCTAATCCTAATGCTATTGCAATTGCCAATGCTAATGCTAATGTTAATGCTGATATTGCTATTGCCATGGCTAATGCTAATGCTAATGCTAGTGCTAATGCTGATGCTAGTGCTAGTGTTGTTCCATCTTCTTCAACTGCTAGAAAATCGAAGAAAAGCGCGGCGAAAAAGTCAACTTCACAGAAGAAGAAAAAGGACTCAAACATACCAGAGAAGGAACAAGTGCAAGAAAAGTTGGTTGAACTTCTTCCTAATTCTGTTTTCTACACTAAGCTTCTTGATCATGAGGCTGAGATTGATGCTGCAATTGCAAAGAAGAAGATTGAGGTGCAAGAGTGTCTTAGAAACCATGCCAATGTTCAGAAGATTCTTCGAGTTTATGTGTTCAACACCTTCGCGAATCAAGCGAAGCCGGGTTTCTTGCGTGACAAGAAAAGTGATGATGTTGTTGAGGAAGAACCTTCTTGGTCGCTTAAGATAACAGGGAGGATAGTGGAGGAAAATGGTGATGATGAGGGTCAAATTAAAAACCCAAAATTCTCTAATTTCTTCAAGAGGATCTTCATATATTTGGATAAGAATCTTTATCCTGATGATCATGTGATTGTGTGGGATAGTGATTATTCAGTTACCCCAAATGATGGTTTTGAGGTGAAGAGAAAAGGAGACAAGGAATTCACAGCAAAGATCAAAGTTGAAATTAACAATACACCAGAGAAGTTCATCCTTTCAAAACCATTATCTGAGATTTTGGGATTAGAATTTGAGACTCATTCAAGAATAGTATCTGCATTTTATAACTATGTTCATTCTAAGAATCTACTTAATCCTAATAACCTTTGGTTATTCAAATGTGACACTCCACTCAAAAGGCTATTTGGTGAACAAGAGAAGATACTGAAATTTGAAGATGCTATTGAGAAGTTATCAGATCATTTGACAAGGCCGAAACCGATAGAATTCGAGCATAGGATCAAGCTTTCAGGTGATTGTTTGGAAGGGATTTCATGCTATGATATTCAAGTTGATGTCCCTTTCGCGCTCGAAAAGGACATGGAAACATCCATGGATCTGAAAGACAATTGGGTTACCAAAGGGATTGAAGCTTATGGTAAGAAGATTCATGCCTCATTTGAGGAGATGAATGAGCATAGAAGAACAAGGGCTTTGTTTCTTAGCTTTAGCCAGGATCCTGAAGGGTTTGTTAAGGCTTTCATTGATTCTCAAAGCAAAGGGATGAATCATAACAACAATAACAATGATGGTGATGCTTCTGGAAGTGGAAATCATAGAGCTGGAAAGGAAATTCTTTCTGATGAAATCTTCAATCAACCATGGGTTAAGGATGCTGTGATTCGGTACCTGAACAAAAAAGCTGCAAGTGATGATGCAAATGTTGATCGGAATCGCAGGAATGCTGCTCGTGGAAAAGCTCCTATGAAATAA 2514 0.4097 MIEPLSELEAMVIIPVKREVRYSAKVPTPALVKEARDPQLEKKVITIFSAKMAVTLYNPNSEAGLKKLNEYLLPRSYITGYQASKDDVTVYGAFSKPPSDEYVNVSRWYKHIDALLRISGVTGEGSGVTVESSLVADDDIATPPPADTKAAAADDDDDDDVDLFGEETEEEKKAAEERAAAVKAAGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRGVQMDGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLTVEPINEFQQKQFARMNNQGRNFPPPKQPHQSNPHQIPEALALLLAQQSQYVQAHHGQSQQIIQAQAQSIAQLHNANVIANAISSANANANPNIANPNAIAIANANANVNADIAIAMANANANASANADASASVVPSSSTARKSKKSAAKKSTSQKKKKDSNIPEKEQVQEKLVELLPNSVFYTKLLDHEAEIDAAIAKKKIEVQECLRNHANVQKILRVYVFNTFANQAKPGFLRDKKSDDVVEEEPSWSLKITGRIVEENGDDEGQIKNPKFSNFFKRIFIYLDKNLYPDDHVIVWDSDYSVTPNDGFEVKRKGDKEFTAKIKVEINNTPEKFILSKPLSEILGLEFETHSRIVSAFYNYVHSKNLLNPNNLWLFKCDTPLKRLFGEQEKILKFEDAIEKLSDHLTRPKPIEFEHRIKLSGDCLEGISCYDIQVDVPFALEKDMETSMDLKDNWVTKGIEAYGKKIHASFEEMNEHRRTRALFLSFSQDPEGFVKAFIDSQSKGMNHNNNNNDGDASGSGNHRAGKEILSDEIFNQPWVKDAVIRYLNKKAASDDANVDRNRRNAARGKAPMK* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1479 837 MobiDBLite consensus disorder prediction 816 837 - -
Aev04g1479 837 Pfam EF-1 guanine nucleotide exchange domain 195 266 IPR014038 GO:0003746|GO:0006414
Aev04g1479 837 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 376 820 - -
Aev04g1479 837 SMART swib_2 593 674 IPR019835 -
Aev04g1479 837 SUPERFAMILY GST C-terminal domain-like 59 119 IPR036282 -
Aev04g1479 837 SUPERFAMILY eEF-1beta-like 190 271 IPR036219 -
Aev04g1479 837 SMART EF1_GNE_2 193 278 IPR014038 GO:0003746|GO:0006414
Aev04g1479 837 MobiDBLite consensus disorder prediction 394 428 - -
Aev04g1479 837 ProSiteProfiles SWIB/MDM2 domain profile. 592 671 IPR003121 -
Aev04g1479 837 Gene3D - 24 129 - -
Aev04g1479 837 PANTHER SWI/SNF COMPLEX COMPONENT SNF12 HOMOLOG ISOFORM X1 376 820 - -
Aev04g1479 837 MobiDBLite consensus disorder prediction 768 782 - -
Aev04g1479 837 MobiDBLite consensus disorder prediction 768 787 - -
Aev04g1479 837 MobiDBLite consensus disorder prediction 816 830 - -
Aev04g1479 837 Gene3D - 186 280 IPR014717 -
Aev04g1479 837 MobiDBLite consensus disorder prediction 134 162 - -
Aev04g1479 837 CDD SWIB_like 599 669 - -
Aev04g1479 837 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 157 165 IPR001326 GO:0003746|GO:0005853|GO:0006414
Aev04g1479 837 SUPERFAMILY SWIB/MDM2 domain 590 679 IPR036885 -
Aev04g1479 837 Gene3D SWIB/MDM2 domain 589 677 IPR036885 -
Aev04g1479 837 Coils Coil 165 185 - -
Aev04g1479 837 Pfam SWIB/MDM2 domain 596 669 IPR003121 -
Aev04g1479 837 CDD EF1B 191 260 IPR014038 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1479 Aev-Chr4 10563483 10574860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1479 58 272 Eukaryotic Initiation Factors Gene Family AT2G18110 77.315 5.46e-96 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Aev04g1479 SWIB 8.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1479 K11650 - dcr:108196700 360.147