Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1468 ATGGACAACAACAACAGCAACCCTCAGCACCAAGCCCAACCAGGCCCATACCCAGGCCCACCAGGAGGCCCACCACCACCACCCTCCGCCGCCCCATTCCACCACCTCCTCCAGCAGCAGCAGCAGCAGCTCCAGATGTTCTGGTCCTACCAGCGCCAAGAGATCGAGCACGTCAATGACTTCAAGAACCACCAGCTCCCCTTAGCCCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTTCGCATGATCTCCGCCGAGGCCCCAATCCTCTTCGCTAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACTATCCGCTCCTGGCTCCACGCCGAGGAGAACAAGAGGAGGACGCTTCAGAAGAACGACATCGCCGCCGCCATAACCCGCACTGACATCTTCGACTTCCTCGTTGATATTGTGCCTCGGGATGATATCAAGGACGATGCTGCTGCCTTGGGCGGAATTGTGGCTGCTGCCGCTGCCGCCACTGCCAGTGGGGTGCCCTATTACTATCCCCCATGGGCCAGCCCGCCGGCCCGCCTGGCTTGGCAGTCTGTGTGGCAGGCTGCTGCTGATGATGGGAGCTATGGGAGTGGTGGCAGTGCTGGACAGGGGAATCTCGATGGACAGAGGGTAATGTCCTCTGAGTTGGGTGAAGATGAAAATCGGTGTAGAGTTAGGGATGTTGTTTGTCTTTTGTGA 705 0.5887 MDNNNSNPQHQAQPGPYPGPPGGPPPPPSAAPFHHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDDIKDDAAALGGIVAAAAAATASGVPYYYPPWASPPARLAWQSVWQAAADDGSYGSGGSAGQGNLDGQRVMSSELGEDENRCRVRDVVCLL* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1468 234 SUPERFAMILY Histone-fold 25 137 IPR009072 GO:0046982
Aev04g1468 234 Pfam Core histone H2A/H2B/H3/H4 52 128 IPR007125 GO:0003677
Aev04g1468 234 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 1 179 - -
Aev04g1468 234 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 178 211 - -
Aev04g1468 234 MobiDBLite consensus disorder prediction 13 32 - -
Aev04g1468 234 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 179 - -
Aev04g1468 234 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 178 211 - -
Aev04g1468 234 MobiDBLite consensus disorder prediction 1 32 - -
Aev04g1468 234 Gene3D Histone, subunit A 32 143 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1468 Aev-Chr4 10457666 10458768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1468 29 211 CCAAT-HAP5 Transcription Factor Family AT3G48590 74.879 3.73e-86 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Aev04g1468 Histone 2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1468 - - fve:101313302 259.61