Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1459 ATGGAGTGGAATTTCAAAGCACCTTCTTGGGATATGATGAGTAGTAGTGTTGTGGATGAAGAAGCAACCTTACCAAACATAGAAACAACAATGGAGGATGATGAATCAAGTGCCAGATTTGGGGTTTATTACAGAACCAAAGGGAATGATGATGATGAGTTTTCTGTTGACTTGAAGCTTGGTCATGTTGGGAATTATCATTTTGGCTCTGACCATATAGTTCCCAATAATAATAATAATAATAATATTAATAATAATAATAAGTCCAAAGTTGTTGGTGCTTCTTCTGGAGTCTCCAAAATAGCATCATCCTCTCCATATAAGAGAGCTAGAGCAAGTAACAATGGAACATTGAGAGTGTCATGCCTTGTGGATGGGTGCAATTCAGATCTCAGCACTTGTAGAGATTATCATAGAAGACATAAGGTCTGTGAACAACATTCTAAGACCCCAGAAGTCACAATTGCTGGCCTCAAGCAAAGATTCTGCCAACAATGTAGCAGGTTCCATTCACTTGAGCAATTTGATGAAGGAAAAAGAAGCTGCAGAAAACGCTTAGATGGACACAACCGAAGGAGAAGAAAGCCCCAACCCGAACCTCTCACGCGACCTGGTACTTTTTTGTCCAATTACCAAGGAAGCCAGATGCTACCATTGTCATCAAGTTCACATTCATATTCTCCGTCAGCCATGGCGATGAGCCCTGGTTGGAGTAGTGGTGGACTTGTTAATTCCTCTTCATCAGATTCTTCAAGGCTTCAACACCACCACCACCACCACCAACAAGACTTTTTCCATGGATCTTCTCCAGCAGCCAGCAGCAGCTATAACAAAGAAGAGAATAAGCACCAAGTAGCAGCAGCAGCATCATCATCATTCTTACACAGCAACAGTAATGCCACACCAATATTCAACAATAATAAGATGTTGTTCTATGATAGTAACCTTGTAGCAACTTCTTCAGTCCACGACATCGGCGTCGTCCCTCCTCCTCGTGCTCTCTCTCTTCTGTCACCATCATCACCATCGCCATCGTCGTCATCACAGACTCATCATCACAGATCAATGTGCGTGATGCAGCAGCCCTTAGGCCTAAGCCTGCTGCGAGATGATGATAACAACAGCAACAGCTTCGAGTCCGTGGACAGAGTCTTGGCCGTCCCTAACAACAACAACAATAATAATAATAGTAATGGGAGTAGTAGTGACCACCATTGTTGTCCCTCACCATCACTCTATTATTCTTATGACAATCACAACATCGGTGGTTCTGATGGATCGCACGGCAATGAAGCCCATCATCAACTTTTTCCCTTTCAATGGGAATAG 1329 0.4289 MEWNFKAPSWDMMSSSVVDEEATLPNIETTMEDDESSARFGVYYRTKGNDDDEFSVDLKLGHVGNYHFGSDHIVPNNNNNNNINNNNKSKVVGASSGVSKIASSSPYKRARASNNGTLRVSCLVDGCNSDLSTCRDYHRRHKVCEQHSKTPEVTIAGLKQRFCQQCSRFHSLEQFDEGKRSCRKRLDGHNRRRRKPQPEPLTRPGTFLSNYQGSQMLPLSSSSHSYSPSAMAMSPGWSSGGLVNSSSSDSSRLQHHHHHHQQDFFHGSSPAASSSYNKEENKHQVAAAASSSFLHSNSNATPIFNNNKMLFYDSNLVATSSVHDIGVVPPPRALSLLSPSSPSPSSSSQTHHHRSMCVMQQPLGLSLLRDDDNNSNSFESVDRVLAVPNNNNNNNNSNGSSSDHHCCPSPSLYYSYDNHNIGGSDGSHGNEAHHQLFPFQWE* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1459 442 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1 20 442 - -
Aev04g1459 442 MobiDBLite consensus disorder prediction 203 250 - -
Aev04g1459 442 ProSiteProfiles Zinc finger SBP-type profile. 119 196 IPR004333 GO:0003677
Aev04g1459 442 MobiDBLite consensus disorder prediction 336 355 - -
Aev04g1459 442 SUPERFAMILY SBT domain 120 201 IPR036893 GO:0003677|GO:0005634
Aev04g1459 442 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 20 442 IPR044817 GO:0003677
Aev04g1459 442 MobiDBLite consensus disorder prediction 338 355 - -
Aev04g1459 442 Pfam SBP domain 122 195 IPR004333 GO:0003677
Aev04g1459 442 MobiDBLite consensus disorder prediction 266 283 - -
Aev04g1459 442 MobiDBLite consensus disorder prediction 177 283 - -
Aev04g1459 442 Gene3D - 112 183 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1459 Aev-Chr4 10394701 10402807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1459 1 273 SBP-box Gene Family AT5G50670 41.758 1.96e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aev04g1459 SBP 2.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1459 - - ahf:112790946 309.301