Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1429 ATGTCATCCATGGCAGATTGGGGTCCTAATGTTCGTGCGTTTTTTGAACGCATGCAGAAGGAAGATAATGACAGTGAAGGTGAAGTGGAGGAAGAAGGCAGTGAAGATAAGGAAAATAACATTAAGGAAGGGAAAGATCTTAGTAATTCTAAGGAGGAAGGTCATGAAGAGGAGATGAAGATTGACCTAGTGTTGGAGGTGCTGGAGGTTGATAACCATTGTTCATACTCAGATTCCATTGTGATGGAGGATTTAGTACGAGAAAAGGGAACAAAGGGAGTGGTTTTGGGTCAGCTCTCTTCAAAACCCATTAAGATGAAGGAGATCAAATCTCTTTCAGCAGGGATCTCCACGAACCAGCAAATAACTAAAGTGCTAAGCGGGAATGACGTTATTTCAATAGATCGAGTGGGGAACGACGAAGATGGTGTCTATGTGGACATCGACTTCAATAACAACGAAGAGAGAGGCAACAATAATCAAGCATATGTACTGCCGCCACCGCCCAAACCACCAGAACCGATTTCACCGAAGAAGAAAGGAACATTGCGAACTGCATTTGTGTTAAAGCATTGGAGAAACCTACTCACAACCACCGACAAAGCTGCCTGGCAACTATTCTTGCTGGGCGACCATCAAGATGTCGGTGGAGACTGGCGACCGGAGATGCAGAAGATAGAAGTGGCAACACCCTTTCTTTGCAGTAGAAGCTTCGTGAAAGTGTTAAAGGAGAAAGTGAGGGTACAAATGCTATTTGGGCAAGGCTGTTCTGGTTTAACCCTAATGGGCCAAGCCCAATATGAGCTCAAATATAATGGCTATAGTAATGCTAGAGGAAGCTATTTTCTTGAATTAATAGATTGGGTCCATCGATTTGAGGTACTACTAATTTCACTTGCTGAAACTAATACTAGATATGGTCCTCAGCCTCATACCTATGCTGAAATAAGTATCCCTACAGCTTTAGTTGGAGAGATATTGGGACAAGCCCATGTCACTAAAAGGGAGATTTTAAAAGCTTATAGGGATGCTTTCACACGACATTTTCTTGCAGTTAACTTGAAGCAATTTTTGAAGACAATAAGGAGTGAAAATCAAGCAGCTGCTGAAGAGGATATGTCAAGGGAGGTCCATTTTTCATTATTATGTGCCTGTGCCGCAAATTGGAACAACCAAAAGAGTGTAACGGGGAAGCTCAAAAATAAGTCAAAGCTCTTTGAATTGGAAGACGAGAAGAGCAACATTGCGACACAATTTGAAAAATTAAAAAGCTATGCATTAGGTGTTTGGGTTTTAGCTCACAAACTGATTATAAAATTGAAGAAGCTAAAACAGAAGAAGACACATCTCATGGATGTTCACAGCAAGGGTGGAATTTTTGCACAAACTGGGGTCCTTGCATACAGTTCCTCTAAGAAAAGAGTCCCTATGGCTGTTGCACTCCAGAGGGATGAAATTGCAGTCTATCATTTGGTATCATTTAGCGAAGAAGTTCGAGGAGGTGACGCGTCTACTCAAGGAAGACCGACAATATCATCCAGTGTGGTGACTCATGTTGAGAGTGAGGAGGACCAAGGTCTAACCCTAGTTTCTACAAAGCAATATGGAAAGAGTCTGGTGATTGATGGGCACTTGCAATGTTGTGAGAAGGATGAGTTTGTTTTTCATGAGAACTTGGTCCATCCTGCTCTTCTTTCACATAATGGCATACCCAAAACTGTATTTATCATGGGAGGTGGTAGTGGGTCTGCTGCAAGAGAAGTTCTGAAGCACAAAGACATAGAGAGAGTGATCATATGTGAAATTGATAGGAAAGTTGTCAAAATGTGCCGCAAACATATGACTGCAAATCATGAGGCATTCAATGATGAGAGGCTTCATATTGTTTATAAAGATGCAAAAGAAGAACTAGAGGAATCTGAAGAGAAGTTTGATGTGATAATTGGGGATCTCAATCTACCAGAAATAGGCTTAAGCAAGGAACTCTATAGAATATCCTTTTTTGAGAATATTGTGAAAACAAAACTCAAGGATAATGGTATCTTCATCACACAAGCAGGCCCTGCAGGAATGTTCACCCATATGGATATCTTCTCACCAATACATTGCACTCTTAGAAGGGTTTTTGCATATGTGGTTCCATACAAAGCTCAGGTGCCTTCCTTTGGAGATGTATGTGGATGGGTTATGGCTTATGGAAGAGATTAA 2208 0.4135 MSSMADWGPNVRAFFERMQKEDNDSEGEVEEEGSEDKENNIKEGKDLSNSKEEGHEEEMKIDLVLEVLEVDNHCSYSDSIVMEDLVREKGTKGVVLGQLSSKPIKMKEIKSLSAGISTNQQITKVLSGNDVISIDRVGNDEDGVYVDIDFNNNEERGNNNQAYVLPPPPKPPEPISPKKKGTLRTAFVLKHWRNLLTTTDKAAWQLFLLGDHQDVGGDWRPEMQKIEVATPFLCSRSFVKVLKEKVRVQMLFGQGCSGLTLMGQAQYELKYNGYSNARGSYFLELIDWVHRFEVLLISLAETNTRYGPQPHTYAEISIPTALVGEILGQAHVTKREILKAYRDAFTRHFLAVNLKQFLKTIRSENQAAAEEDMSREVHFSLLCACAANWNNQKSVTGKLKNKSKLFELEDEKSNIATQFEKLKSYALGVWVLAHKLIIKLKKLKQKKTHLMDVHSKGGIFAQTGVLAYSSSKKRVPMAVALQRDEIAVYHLVSFSEEVRGGDASTQGRPTISSSVVTHVESEEDQGLTLVSTKQYGKSLVIDGHLQCCEKDEFVFHENLVHPALLSHNGIPKTVFIMGGGSGSAAREVLKHKDIERVIICEIDRKVVKMCRKHMTANHEAFNDERLHIVYKDAKEELEESEEKFDVIIGDLNLPEIGLSKELYRISFFENIVKTKLKDNGIFITQAGPAGMFTHMDIFSPIHCTLRRVFAYVVPYKAQVPSFGDVCGWVMAYGRD* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1429 735 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 515 731 - -
Aev04g1429 735 Coils Coil 623 650 - -
Aev04g1429 735 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 491 735 IPR030374 -
Aev04g1429 735 Gene3D - 349 475 - -
Aev04g1429 735 Pfam Spermine/spermidine synthase domain 552 723 - -
Aev04g1429 735 MobiDBLite consensus disorder prediction 35 56 - -
Aev04g1429 735 MobiDBLite consensus disorder prediction 1 56 - -
Aev04g1429 735 Hamap Polyamine aminopropyltransferase [speE]. 492 734 IPR001045 GO:0003824
Aev04g1429 735 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 517 733 IPR029063 -
Aev04g1429 735 CDD AdoMet_MTases 578 685 - -
Aev04g1429 735 Pfam Ribosomal protein L3 387 486 IPR000597 GO:0003735|GO:0005840|GO:0006412
Aev04g1429 735 Gene3D Vaccinia Virus protein VP39 548 735 IPR029063 -
Aev04g1429 735 MobiDBLite consensus disorder prediction 155 177 - -
Aev04g1429 735 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5-LIKE 515 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1429 Aev-Chr4 10022438 10033651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1429 359 486 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 37.692 6.86e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1429 K18787 - gmx:100819011 270.011