Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1427 ATGTCGGTGAATCTAACGGCAAACGCGATTCCGTCGATAATCAGCGGCGACGTGAACTCGAAGCCGCTGGTTCAGGTTCTCGATTTGGCGTTGATCTCAAGTGATAACAGCAACAACAACAACTCTCAGCAGCAGAGGTACCGTTTGTTGCTATCCGACGCCGTTTCGTCTCACCAAGCCATGCTGGCGACTCAGCTCAACGACCGAGTCCGAACCGGCCGAGTCATGAAAGGCTCTGTTGTTCAGCTCCTCGAGTATATATGCAGCCCTCTCCGTAATCGCAAGTCTCTCTCTCTCTCTTACTTACTCATGCTTGATGCATCTAATGATCTCATTTTAGGTTAG 345 0.5014 MSVNLTANAIPSIISGDVNSKPLVQVLDLALISSDNSNNNNSQQQRYRLLLSDAVSSHQAMLATQLNDRVRTGRVMKGSVVQLLEYICSPLRNRKSLSLSYLLMLDASNDLILG* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1427 114 SUPERFAMILY Nucleic acid-binding proteins 1 95 IPR012340 -
Aev04g1427 114 Gene3D - 3 112 IPR012340 -
Aev04g1427 114 PANTHER REPLICATION FACTOR A 1, RFA1 2 102 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev04g1427 114 Pfam Replication factor-A protein 1, N-terminal domain 5 97 IPR007199 GO:0003677|GO:0005634|GO:0006260
Aev04g1427 114 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A 2 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1427 Aev-Chr4 10012124 10012468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1427 26 95 Core DNA Replication Machinery Family AT2G06510 48.571 3.52e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1427 K07466 - gmx:100792409 140.198