Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1418 ATGTCGTCACTTCAAGAATCACCCGCTTGGTCTTGGAGCAACGATCAAGTATTCATCACCATGATTTCAGAATCAGAGTTGAAGAATCGACCAACACGTTGCCGCGTGATGATTCCAATCTACCGTAGCCTTCTCCTTCTCGAACCATTCTGTGAAGGCTTTGTTAAGAAACTACTTGAGAAATTCGAGGACATACCACAATCTTTCTTCATTGGGCGTGATTGTGATATGGTTCAGAATCTCTCAACAATGCTGCGTCAATCGATACTACAACAAGAACAACCTCGTCAACGAGTTGATCACTTTGTCGTGTTTGTTTTGGCGTCCAAGAACTCATGTTTTGGCGACGAGCAATTTCCGTCGAGTGAGTTCGTAAGAAGTTTGGCTTGTGAGAGTGGCGTGTTTTCTTTACCTGCTGGAGCAAGGGCAATAGAGAAATTGAAGGTCCAAGATGAGCAAAAAGACGAGAATTGTGCTATTTGCTTGCTAGAATTTTTCTTGGACAGTGAAGTGGCCAAGTTACCATGTTCTCATCTCTATCACTATACTTGTGTTTTGAAGTGGTTTGTGCAAAACAGTACATGTCCTCTTTGCCGATTTTCTTGTAATGATGCTTGA 618 0.4239 MSSLQESPAWSWSNDQVFITMISESELKNRPTRCRVMIPIYRSLLLLEPFCEGFVKKLLEKFEDIPQSFFIGRDCDMVQNLSTMLRQSILQQEQPRQRVDHFVVFVLASKNSCFGDEQFPSSEFVRSLACESGVFSLPAGARAIEKLKVQDEQKDENCAICLLEFFLDSEVAKLPCSHLYHYTCVLKWFVQNSTCPLCRFSCNDA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1418 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 205 IPR013083 -
Aev04g1418 205 SUPERFAMILY RING/U-box 151 202 - -
Aev04g1418 205 SMART ring_2 158 198 IPR001841 -
Aev04g1418 205 ProSiteProfiles Zinc finger RING-type profile. 158 199 IPR001841 -
Aev04g1418 205 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 75 200 - -
Aev04g1418 205 Pfam Ring finger domain 157 199 IPR001841 -
Aev04g1418 205 PANTHER F6A14.12 PROTEIN-RELATED 75 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1418 Aev-Chr4 9957347 9957964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1418 138 203 C3H Transcription Factor Family AT1G68180 40.845 8.14e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1418 - K11982 aprc:113862471 139.813