Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1397 ATGTTAAGCTTCATGGCGGGACTTGCACCTGAAGGATCACAGTTTGATGCTCGTAACTATGATATGAAGATGAATGAATTGCTCACATCTGATGGGCAGGACTTCTTCACATCCTATGATGAGGTTCATGATAGTTTCGATGCTATGGGTTTGCAAGAGAATCTCCTGAGAGGCATTTATGCATATGGTTTTGAGAAGCCATCAGCTATTCAGCAAAGGGGAATAGTTCCATTTTGCAAGGGACTTGATGTTATTCAACAGGCTCAGTCTGGAACCGGAAAGACGGCTACTTTCTGCTCTGGGATTCTGCAGCAACTTGACTACAGTGTGACAGAATGCCAGGCCTTGGTTTTAGCACCAACTCGTGAACTTGCTCAGCAGATTGAAAAGGTTATGCGAGCACTTGGAGACTATCTAGGTGTCAAGGTACACGCATGTGTGGGAGGTACCAGTGTTCGTGAAGACCAACGCATTCTATCGAGTGGTGTTCATGTTGTTGTTGGTACCCCTGGTCGTGTGTTTGATATGCTGCGCAGACAGTCACTTCGTCCAGATTACATCAAGATGTTTGTGTTGGATGAAGCTGATGAAATGCTTTCCCGAGGTTTTAAGGATCAGATCTATGATATATTCCAGCTGCTGCCAGCTAAGATTCAGGTGGGAGTTTTCTCTGCTACAATGCCCCCTGAAGCCCTTGAGATCACAAGGAAATTCATGAACAAACCTGTGAGGATCCTGGTGAAGCGTGATGAACTCACCTTGGAGGGTATCAAGCAGTTCCACGTCAATGTCGAGAAAGAGGAGTGGAAGCTGGATACACTCTGTGATCTTTACGAGACATTGGCAATCACCCAGAGTGTCATCTTTGTGAACACCAGAAGGAAGGTTGATTGGCTGACTGACAAGATGCGAAGCCGAGACCACACTGTCTCCGCAACTCATGGAGACATGGACCAGAATACCAGGGACATCATTATGCGTGAATTCCGATCCGGTTCTTCCCGTGTTTTGATTACTACTGATCTCTTGGCTCGTGGTATCGATGTCCAGCAGGTGTCTCTAGTTATAAATTATGATCTCCCAACACAGCCGGAGAACTATCTCCACCGTATCGGTCGTAGTGGTCGGTTTGGTAGGAAAGGTGTTGCTATCAACTTTGTCACAAGGGACGATGAGAGAATGCTTTTTGACATCCAGAAGTTCTACAATGTGGTCATTGAGGAGCTGCCATCAAATGTTGCTGAACTCCTCTGA 1254 0.4617 MLSFMAGLAPEGSQFDARNYDMKMNELLTSDGQDFFTSYDEVHDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSVTECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVAELL* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1397 417 PANTHER RNA HELICASE 27 417 - -
Aev04g1397 417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 398 IPR027417 -
Aev04g1397 417 SMART helicmild6 297 378 IPR001650 -
Aev04g1397 417 Pfam Helicase conserved C-terminal domain 270 378 IPR001650 -
Aev04g1397 417 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 256 417 IPR001650 -
Aev04g1397 417 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 191 199 IPR000629 -
Aev04g1397 417 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 75 245 IPR014001 -
Aev04g1397 417 Gene3D - 34 252 IPR027417 -
Aev04g1397 417 Gene3D - 253 417 IPR027417 -
Aev04g1397 417 CDD SF2_C_DEAD 257 387 - -
Aev04g1397 417 Pfam DEAD/DEAH box helicase 69 230 IPR011545 GO:0003676|GO:0005524
Aev04g1397 417 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 44 72 IPR014014 GO:0003724
Aev04g1397 417 PANTHER EUKARYOTIC INITIATION FACTOR 4A-2 27 417 - -
Aev04g1397 417 CDD DEADc_EIF4A 48 246 - -
Aev04g1397 417 SMART ultradead3 63 260 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1397 Aev-Chr4 9801718 9803960 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1397 5 417 Eukaryotic Initiation Factors Gene Family AT1G72730 87.923 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1397 K03257 - gmx:100786735 809.675