Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1393 ATGGAACCTCGCGTTGCGAATAAGTTTCGGCTTGGCCGTAAGATCGGTGCTGGTTCATTTGGGGAGATTTATTTAGGTACTAATATTCAAACCAATGAAGAGGTTGCAATTAAGCTTGAAAGTGTCAAGACAAAGCATCCTCAGCTGCTGTATGAGTCCAAGTTGTACAGAATTCTCCAGGGAGGAACTGGTATTCCAAATGTTAGATGGTTTGGAGTGGAGGGAGATTACAATGTTCTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTTAACTTCTGTAGTAGAAAGCTCTCGCTAAAGACAGTTCTCATGCTAGCTGATCAAATGATCAACCGTGTTGAGTTTGTTCATTCTAAATCATTTCTACATAGGGATATCAAGCCAGATAATTTCCTCATGGGCTTGGGAAGGCGGGCTAATCAGGTTTACTGTATTGATTTTGGATTGGCGAAGAAATACAGAGATAGTACAACACACCAACATATTCCTTACAGGGAAAATAAGAATTTGACTGGAACTGCGAGATATGCTAGCATGAATACTCACCTTGGAATTGAGCAAAGTCGAAGAGATGATTTAGAGTCTCTTGGTTTTGTCTTGATGTACTTCCTAAGAGGAAGTCTCCCTTGGCAAGGACTTCGAGCAGGAACAAAGAAACAGAAGTATGAGAAAATCAGTGAAAAAAAAGTCACTACCTCAATAGAGGCATTGTGTCGAGGTTATCCAACAGAATTCGTATCATACTTTCATTACTGCCGCTCATTAAGGTTTGATGATAGGCCAGATTATGCTTACCTCAAAAGAATATTTCGCGACTTGTTTATTCGTGAAGGATTCCAGTTTGATTATGTGTTTGATTGGACCATATTGAAGTATCAGCAATCACAGTTAGCCACTCCACCAGCACGTGCCATTGTTCCTGGTGTTGGAACTAGTTCTGGAATGGCTCCACCTGTGACTAGTACTGCTGAAAGACAGACAGGAGGGGAAGAAGGAAGACCTCCTCCTGGTCTGTTTTCAGTGGATTCCTCAAGGCGAAGAATGTCAGGTCCCATTTTAAATACTGTAAGTTCTTCAAGGCAGAAAAACCCGGTCACCGCTGATCCTGCTGTTAATAAGGATGTTACGTTTGCCAGTACCAATATCTTGGGCCAGCCAAGTGGATCATCAAGGCGAGTTGCTGTTTCAAGTAGCCAGGACGCTTTGGTTGGTTCTGAATCAGACAGTCGTTTGCGTGCAAATGAGGCTAGCTCTTCAGCAGCACACAGACTTGCAAGTGGGCAAAGAAGTTCACCTGTTATATCTTCAGATCCCAGGAAGGGTGTGTCATCATCGAGAGGTGCGACTCAAGGTAAGAATTATGAAAGTGCAGTCAAGGGCATTGAGGATTTGCAGATAGAGGATGACGAAAGGGCCCGTAAATAA 1434 0.4289 MEPRVANKFRLGRKIGAGSFGEIYLGTNIQTNEEVAIKLESVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYCIDFGLAKKYRDSTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGFVLMYFLRGSLPWQGLRAGTKKQKYEKISEKKVTTSIEALCRGYPTEFVSYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARAIVPGVGTSSGMAPPVTSTAERQTGGEEGRPPPGLFSVDSSRRRMSGPILNTVSSSRQKNPVTADPAVNKDVTFASTNILGQPSGSSRRVAVSSSQDALVGSESDSRLRANEASSSAAHRLASGQRSSPVISSDPRKGVSSSRGATQGKNYESAVKGIEDLQIEDDERARK* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1393 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Aev04g1393 477 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g1393 477 MobiDBLite consensus disorder prediction 376 455 - -
Aev04g1393 477 MobiDBLite consensus disorder prediction 350 369 - -
Aev04g1393 477 PANTHER CASEIN KINASE-RELATED 1 459 - -
Aev04g1393 477 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Aev04g1393 477 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g1393 477 PANTHER CASEIN KINASE I-LIKE 1 459 - -
Aev04g1393 477 MobiDBLite consensus disorder prediction 312 477 - -
Aev04g1393 477 SUPERFAMILY Protein kinase-like (PK-like) 6 290 IPR011009 -
Aev04g1393 477 CDD STKc_CK1_delta_epsilon 8 282 - -
Aev04g1393 477 Gene3D Transferase(Phosphotransferase) domain 1 1 307 - -
Aev04g1393 477 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1393 Aev-Chr4 9768351 9772351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1393 7 223 EF-hand Containing Proteins AT2G17890 26.222 5.06e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aev04g1393 Pkinase 1.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1393 K02218 - qsu:112002143 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2686 01 29747864 29751637 Aev04g1393 04 9768351 9772351 PCT