Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1391 ATGGAAGCCGGCGGAGCAGAAGGTGGAGAGGATGAGAGGCGGGTGGAAACTCCAAAGCTAGGGATGCGGTTCCGGGATGACCAGGAAGTTAGGAAATATTACGAGGAGTATGCCAATAAGGTAGGCTTTACATTTAAGATTAGGAGTACAAAGAAGACGAAAGACCAAAGAGTACGGTATCGTATATTTGCATGTTCGAGGGAGGGATACAGGAGGTCGAAGGTAGATACAATTGCTAACTCAAACCCAACAATTGTTGCAAATTGCGGGGCAAGGATTACAGTTACAATGGACGAGACCGGAGATCTTGTAATAACCAAGGTTGTGACTGAGCATTCACACTTAGTAAGCCCCGGACGGGCTAGGTCACTAAAAAAGAACAGAATAATCAATATGCAAGCCAAACAGGTTATTGACATAAACGACAATGCGGGTGTGAGGACGAATCAGATATACCGGAGCATTGTGGAAGGTGCTGGCGGTTCTGAATCAACTTCCCCAGACCAACTCAAGTTCCCCAGTTAA 525 0.461 MEAGGAEGGEDERRVETPKLGMRFRDDQEVRKYYEEYANKVGFTFKIRSTKKTKDQRVRYRIFACSREGYRRSKVDTIANSNPTIVANCGARITVTMDETGDLVITKVVTEHSHLVSPGRARSLKKNRIINMQAKQVIDINDNAGVRTNQIYRSIVEGAGGSESTSPDQLKFPS* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1391 174 Pfam FAR1 DNA-binding domain 32 116 IPR004330 -
Aev04g1391 174 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 13 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1391 Aev-Chr4 9755627 9759231 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev04g1391 FAR1 1.3e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1391 - - vun:114175344 114.005