Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1387 ATGTCCAGTCCCATTTTCATAATGGATATAAGAACAGAAATGTTCTCTGACTCAAACGATGCCAGCACCAGCAGCTGCATATTCTACACCAACACCGAAACCCATTACTCAACCGCTTCACACCTCCCACAACAACCACCACCGCCGCCGCCAACATCCGACATAACCTCCCTCATGCGTCTCTCCGAGAATCTCAGCTCAATCTTCAACCCCTCCTCCTCATCCGAGCACCATCATCACCACCACCATGACTCACAGTTAGAAAATGACTTCTACGCCGACGCAAGGATCGTGGTGGGAGACGGGAGAGAACTGGCGGTGCACCGGTGCATTCTGGCGGCGAGGAGCGGGTTCTTCAGGAGGGTGTTTTCCGATAGTAAGAATAAAGAGAAGAGTAATGGTAAGGGTAATGGTAGTAGAAGAAGTAGTGTAGAGATGAAGGAGATAGCGAAGGAGTATGAAGTTGGAGTTGAAGCGGTCAGTGCAGTGGTTGGGTACTTGTATAGTGGGAGAGTGGTGAGGAGGAGAGGAGTGTGTGAGTGTGTGGATGATGATTGTAACCATTTGGGGTGTAGGCCTGCTGTGGATTTCATGCTTCAGCTTCTCTATGCTGCTTCTACTTTCCATATCTCTCACTTGCTTGCTATTTATCAGAGACATCTACTAGACATTCTAGACAAAGTTGCAACAGATGACATTTTGCTGATTCTCTCTGTTGCAAACATATGTGGCAAAACCTGTGACAAATTGCTAGCAAGATGCAAAGAAATCATAGTTAAATCTGATGCTGACATTACCACACTTGAGAAATCACTTCCTCAATCCATAGTGAAACAAATCACTGATAAGCGCATAGAACTCGGCTCAGAAACCAAATTACATTTTCATAACAAACACATAAAGAGAATACACAGAGCATTGGATTCAGATGATGTTGAATTAGTAAGAATGCTGTTGAAAGAAGGAAACACAAGCCTCGACGAGGCTTGTGCTCTTCACTACGCAGTAGCATACTGCGACGCCAAGACGACGATCGAGCTTCTCGATCTCGGCTTGGCGGATGTAAATCATAAGAACCGCAGGGGATATAGTGCCCTGCATGTTGCAGCAATGAGGAAAGAGCCGAAGATTATAGTGTCTCTGTTAACAAAGGGAGCTTATCCTTCTGATCTTACATTGGATGGAAGAAAAGCGGTTCAGATTTCGAAGCGATTAACGAAGGCAATGGATTATTATAAGTCGACGGAGGAAGGGAAGGTGTCGTCGAAAGAGAGGCTGTGTATAGAGATATTGGAGCAAGCTGAGAGAAGGGAGCCTCTGCTTGGAGAGGCATCACTTTCACTTGCTATGGCTGGGGATGATTTGCGTATGAAATTGTTGTACCTTGAAAACAGAGTTGGATTGGCGAAAGTTTTGTTTCCAATGGAAGCAAAAGTAGTGATGGATATTGCTCAAGTTGATGGTACATCTGAGTTTCAATCAGAAGACATATACCCTCGAAATATGCGAGGTAGCACTGTGGACTTAAATGAGGCACCTTTCAAAATGAAGGAGGAACACTTAGTTAGGATGAGAGCACTGTCTAGAACAGTGGAATTAGGGAAACGATTCTTCCCACGTTGCTCAGAAGTGTTGAACAAGATAATGGATGCTGATGACTTATCTCAGCTTGCATGTATGGGAAATGACAGCCCTGAAGAGAGACTGATGAAGAGAAGAAGGTACATTGAGCTCCAAGAAATTCTTAGCAAGGCCTTCAATGAGGACAAAGAGGAGTTTGATAGATCTGCCATCTCATCTTCATCATCTTCCACATCACTTGGAGTAGTGGTTAGGCCTAATGCCAAGCTACCCATCAATAACTAG 1866 0.4469 MSSPIFIMDIRTEMFSDSNDASTSSCIFYTNTETHYSTASHLPQQPPPPPPTSDITSLMRLSENLSSIFNPSSSSEHHHHHHHDSQLENDFYADARIVVGDGRELAVHRCILAARSGFFRRVFSDSKNKEKSNGKGNGSRRSSVEMKEIAKEYEVGVEAVSAVVGYLYSGRVVRRRGVCECVDDDCNHLGCRPAVDFMLQLLYAASTFHISHLLAIYQRHLLDILDKVATDDILLILSVANICGKTCDKLLARCKEIIVKSDADITTLEKSLPQSIVKQITDKRIELGSETKLHFHNKHIKRIHRALDSDDVELVRMLLKEGNTSLDEACALHYAVAYCDAKTTIELLDLGLADVNHKNRRGYSALHVAAMRKEPKIIVSLLTKGAYPSDLTLDGRKAVQISKRLTKAMDYYKSTEEGKVSSKERLCIEILEQAERREPLLGEASLSLAMAGDDLRMKLLYLENRVGLAKVLFPMEAKVVMDIAQVDGTSEFQSEDIYPRNMRGSTVDLNEAPFKMKEEHLVRMRALSRTVELGKRFFPRCSEVLNKIMDADDLSQLACMGNDSPEERLMKRRRYIELQEILSKAFNEDKEEFDRSAISSSSSSTSLGVVVRPNAKLPINN* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1387 621 Gene3D Potassium Channel Kv1.1; Chain A 62 257 IPR011333 -
Aev04g1387 621 PANTHER REGULATORY PROTEIN NPR2 9 616 - -
Aev04g1387 621 Pfam NPR1/NIM1 like defence protein C terminal 403 605 IPR021094 -
Aev04g1387 621 Gene3D - 258 438 IPR036770 -
Aev04g1387 621 SMART BTB_4 93 225 IPR000210 GO:0005515
Aev04g1387 621 ProSiteProfiles Ankyrin repeat profile. 361 386 IPR002110 GO:0005515
Aev04g1387 621 SUPERFAMILY Ankyrin repeat 297 403 IPR036770 -
Aev04g1387 621 SMART ANK_2a 327 357 IPR002110 GO:0005515
Aev04g1387 621 SMART ANK_2a 298 326 IPR002110 GO:0005515
Aev04g1387 621 SMART ANK_2a 361 393 IPR002110 GO:0005515
Aev04g1387 621 CDD BTB_POZ_NPR_plant 90 225 - -
Aev04g1387 621 Pfam BTB/POZ domain 85 221 IPR000210 GO:0005515
Aev04g1387 621 PANTHER REGULATORY PROTEIN NPR3 9 616 IPR044292 GO:0009862|GO:2000022|GO:2000031
Aev04g1387 621 SUPERFAMILY POZ domain 76 223 IPR011333 -
Aev04g1387 621 ProSiteProfiles BTB domain profile. 93 176 IPR000210 GO:0005515
Aev04g1387 621 ProSiteProfiles Ankyrin repeat region circular profile. 361 386 - -
Aev04g1387 621 Pfam Domain of unknown function (DUF3420) 264 304 IPR024228 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1387 Aev-Chr4 9711065 9717675 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aev04g1387 NPR1_like_C 7e-91 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1387 K14508 - gmx:100800032 749.969