Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1386 ATGAACCACATCGAAGAAATAGCAGTGAGAGAAGAAAAACCAGAGGAAGTACTCAACGACGCTGTTTATCAGAACGACGACGTTTCAAAGGAGGGTTCGGTAAAGAGAAAGGATGAAGCGGTTTGTGCAGAAGAAGAGAATGGCGGTGGCGGCGTTGAGGGATTGCCGGCGAGGTGGGGGTGTCTGGTGCCGTTCGCGAAGAAGATGTTGGAGATGGTGGAGGATCCGGATACCGACCCGATTGTGTCGTGGAGCTCTGCACGTGACAGCTTCGTAATTTGGGACCCTCACGTGTTCTCCAATACCATTCTCCCCAAGTACTTCAAGCATAGCAATTTTTCCAGCTTCATTCACCAGCTTAATACCTATGGCTTTAGGAAGGTTTATCCAAACCGATGGGAGTTTGCAAATGAAGGATTTCAGGGAGGGAAGAAGCATTTGCTGAAGAACATCATGAGGAGGAAAAAGAATAAGAAGATCAGCAACGATCTGGATCAAATTAAAGGCGTCGCGAACTCGGCGAGGTTCGTCCTGAATGATGAAATTGAGAAGCTGAAGAATGACATGAACTTATTGAAACTCGAAACTCTGAAGCTGAGACAACTTCATGAGAATACACTAATTCAGCTCACAAATTTTGAGGAGCAAGTTCAGAGTGCAGAATCGAGGCCTTCTGTTGCCGAGCAGTTAATAATGCATATGATGAAGCCAAAAAATGAGCTTGATGTTGATTATGAACATCAATGTTCAGAACAATTTGATAATTTGCCCGAGTTATTAAGGGACAATTGTTTCAATTTCACCGGAACAAGTGTAAATAATATTAATGCATCATCACTATCATTATCATCTGCTTATGATGTTATGTTGGAGAAACTAATGGAAGAGAGTTATGTTATTGTTGACAAGGAAGCTGATGTTCTTGTCTCAAAAATGTACCTTCAGTTTGAGGATTTGATTAGTAAGCCAGTGGATTAG 978 0.4243 MNHIEEIAVREEKPEEVLNDAVYQNDDVSKEGSVKRKDEAVCAEEENGGGGVEGLPARWGCLVPFAKKMLEMVEDPDTDPIVSWSSARDSFVIWDPHVFSNTILPKYFKHSNFSSFIHQLNTYGFRKVYPNRWEFANEGFQGGKKHLLKNIMRRKKNKKISNDLDQIKGVANSARFVLNDEIEKLKNDMNLLKLETLKLRQLHENTLIQLTNFEEQVQSAESRPSVAEQLIMHMMKPKNELDVDYEHQCSEQFDNLPELLRDNCFNFTGTSVNNINASSLSLSSAYDVMLEKLMEESYVIVDKEADVLVSKMYLQFEDLISKPVD* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1386 325 Gene3D - 62 155 IPR036388 -
Aev04g1386 325 PRINTS Heat shock factor (HSF) domain signature 65 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev04g1386 325 PRINTS Heat shock factor (HSF) domain signature 116 128 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev04g1386 325 PRINTS Heat shock factor (HSF) domain signature 103 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev04g1386 325 Coils Coil 175 223 - -
Aev04g1386 325 Pfam HSF-type DNA-binding 65 154 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev04g1386 325 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 40 306 IPR027725 -
Aev04g1386 325 SMART hsfneu3 61 154 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev04g1386 325 SUPERFAMILY "Winged helix" DNA-binding domain 63 154 IPR036390 -
Aev04g1386 325 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 40 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1386 Aev-Chr4 9699913 9702222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1386 64 239 HSF AT2G26150 48.876 1.20e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev04g1386 HSF_DNA-bind 6.1e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1386 K09419 - gmx:100818430 225.328