Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1380 ATGCACCCTATGGAAGGTGTCTTCTCCCTCTCTGAAGCCGCCAGACCGAGTTTTCTGCGCTCTCTGGTGCAGTCTTTCGGCTGCGCTTACATTTGTCTGTGGTCTTATGATTCCACTTCACCTAATCGATTGTTCTTCTTGGATGGTTTCTACAACATAAGAAACAATCAACCAAGCTCTTCTCTGGGGAGTGTAGCACAACAGATTTTTTGCCAATACAGGACTTTAGCATTTGATGTCAATGATGACCGTGTTCCTGGACTAGCTTTTAGAAACAACAGCCCCTACTTAGAGCTGCAACAACCAGATCTTCTAAGACTAGCATGGACTGAAATACAAAAACAATTCTTTCAGGAAGCAGGGATTAAGACTGCTGTATTCATGGGGTGCAACAAAGGGGAAATTGAGCTTGGATTCTTAAATATGTCTCAAGCTGAGCTTCAAACAGCACTAAGGAGTTTATTCCCTGAAGATTTTTCAAGACAGGCACATCAACTTGAGCAGAACAATCCACCATCATCATCTTCATCATCTCTGAGATCATTATCCACAGGTAGTCCTGAATACTCATCTCTGCTATTCAGCATCCCAGGAACCTCACAGTTCACAGATCAAACACTTGGTGGAGTTCCCAATATGGCACCTGTGTCAACCACAGCAACAACAAGCATTCACCAACAACAACAAGCAAACCAAATATTCCCAACACAAGAAATTGAAAATGATGCAGTTATGAGAGCAATACTGAGTGCTATATCTCAGCCTCCAATGAATGTCTCTGTTGTGAACCCTGAAACAAGTGCTTTTAAGAGGTACAGAGGAGACATAAGTGGAGGTAGTAATAGTAATAGTAGTAGTAATCCAAATATGGGGTCGAATTTCAGAAGGCAAAGCATGTTGAAAAGATCATTTGCATTCTTCAGAAGCTTGAATTTTATGAGAATTAGGGAAAGGATTCAAGCCACACGACCAACTAGTACACAGCTTCATCATATGATATCAGAGAGGAGAAGGCGTGAGAAACTCAATGAGAATTTTCAGGCACTTAGAGCACTACTTCCTCAAGGAACTAAGAAAGACAAGGCGTCTATACTAACAAGTGCAAAGGAGACATTGAGTTCATTGATGTCTGAAATTGAAAATCTAAGCAAAAGGAATAAAGAATTGACATCATCACTTTTGCCACCATCAATCAAGGAACCTAGTACAACTGAACAAACCAAAGCTGCTACAATAATCTTCCCATCAAATGAAAGATTCCATGTCCAAATTTCACAAGTGCCACCACAAGCAACAAGCTCATCATCATCAGAGGAACGAATGGTGGATTTGCAAGTGGCTGTGAGAGGTCAAAGTTCACAGGTTGATGCATTGATTCGGTTATTGGAATTCTTGAAGCAGGACCAGAATTTGAGTTTGGTTTCAATGGATGCAAACACAACACATGTTGCACAAGGGAATAATTATACCCTTAATCAACTAAACTTCAGATTAAGGATTATTGAGGGAAGTGAATGGGACGAGTCTAGCTTCCAGGAAGCAGTGAGAAGAGTGGTTGGTGATTTAGTACAATTCCAACCAAGTTGA 1587 0.4089 MHPMEGVFSLSEAARPSFLRSLVQSFGCAYICLWSYDSTSPNRLFFLDGFYNIRNNQPSSSLGSVAQQIFCQYRTLAFDVNDDRVPGLAFRNNSPYLELQQPDLLRLAWTEIQKQFFQEAGIKTAVFMGCNKGEIELGFLNMSQAELQTALRSLFPEDFSRQAHQLEQNNPPSSSSSSLRSLSTGSPEYSSLLFSIPGTSQFTDQTLGGVPNMAPVSTTATTSIHQQQQANQIFPTQEIENDAVMRAILSAISQPPMNVSVVNPETSAFKRYRGDISGGSNSNSSSNPNMGSNFRRQSMLKRSFAFFRSLNFMRIRERIQATRPTSTQLHHMISERRRREKLNENFQALRALLPQGTKKDKASILTSAKETLSSLMSEIENLSKRNKELTSSLLPPSIKEPSTTEQTKAATIIFPSNERFHVQISQVPPQATSSSSSEERMVDLQVAVRGQSSQVDALIRLLEFLKQDQNLSLVSMDANTTHVAQGNNYTLNQLNFRLRIIEGSEWDESSFQEAVRRVVGDLVQFQPS* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1380 528 MobiDBLite consensus disorder prediction 274 294 - -
Aev04g1380 528 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED 4 522 - -
Aev04g1380 528 MobiDBLite consensus disorder prediction 276 294 - -
Aev04g1380 528 CDD bHLH_AtbHLH_like 331 383 IPR045239 -
Aev04g1380 528 Gene3D - 325 395 IPR036638 GO:0046983
Aev04g1380 528 Pfam Helix-loop-helix DNA-binding domain 330 375 IPR011598 GO:0046983
Aev04g1380 528 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 326 375 IPR011598 GO:0046983
Aev04g1380 528 Coils Coil 365 392 - -
Aev04g1380 528 SMART finulus 332 381 IPR011598 GO:0046983
Aev04g1380 528 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 327 394 IPR036638 GO:0046983
Aev04g1380 528 Coils Coil 332 352 - -
Aev04g1380 528 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 4 522 IPR044658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1380 Aev-Chr4 9650960 9656611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1380 15 524 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 41.499 5.69e-103 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev04g1380 HLH 2.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1380 - - adu:107479037 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2680 01 29715280 29718308 Aev04g1380 04 9650960 9656611 PCT