Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1360 ATGACCCACAATAACAATAATAAGAAATATTCGTTTGATCCTGTGAGCAAATTATTGGCCGAGAAGAATATTATTCTTCCTTCTAGAGGATCATCATGGGACCTTCATCAAGAAGCAGGAAAAGATGAAAACAAGAGTGGTATCAAGCTGAAACTATGGAAGAAAGAAGATGGTGGGAATAATGAAAATCTTCGAGGTGAGGAGGATGATGGGTCGGTGAAGTGGATGTCTTCAAAGATGAGGATGATGCGGCGGATGATGGTACCGGATCAAACGAGTTCCGGTAACAAGAACAAGTTTGTAGAGGAGGCAAAACAACAACCACTATCACCTCTACTAGGTGCTGATGATAATAGCACCAACAATTCTTCAAATCATAGCAATAATAATAATAATATCACTGTTAGGGTTTGTTCTGACTGCCACACCACTAAGACCCCTCTATGGAGGAGTGGACCTAGAGGTCCTAAGTCTCTTTGCAATGCCTGTGGGATTCGACAAAGGAAGGCAAGGCGGGCCATGGCTGCGGCCGCCGCGGAAGCAGCATCGGCAAATGGTATAATTCCCACGGCTTCCGAGACGTATGATAATGATGTGAAGGGAAAGAAGTTGCACAAGAAAGAGAAGAAGAAGAAGAAGCTGAAAGCCGAGTGTGAAGATGATGATGACGATGATGATGAAGAAGAAGATGAACCACAAATGAAAAAGAAGCGAAAACTTGGAGGAGCCAAGGCATCATGTCATAGAGGAAGAAAGAAATTTGGGTTTGATGATTTGACAATAAATCTGAGTAAGAATTTGGCTTTGCAAGTTTTCCCTCAAGATGAGAAAGAGGCTGCAATCTTGCTGATGGCTTTGTCTTATGGCATGCTTCATGGCTTTCCCTCAGATCGTTACTTAAATTAA 906 0.4238 MTHNNNNKKYSFDPVSKLLAEKNIILPSRGSSWDLHQEAGKDENKSGIKLKLWKKEDGGNNENLRGEEDDGSVKWMSSKMRMMRRMMVPDQTSSGNKNKFVEEAKQQPLSPLLGADDNSTNNSSNHSNNNNNITVRVCSDCHTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAEAASANGIIPTASETYDNDVKGKKLHKKEKKKKKLKAECEDDDDDDDEEEDEPQMKKKRKLGGAKASCHRGRKKFGFDDLTINLSKNLALQVFPQDEKEAAILLMALSYGMLHGFPSDRYLN* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1360 301 MobiDBLite consensus disorder prediction 213 244 - -
Aev04g1360 301 Pfam GATA zinc finger 138 171 IPR000679 GO:0006355|GO:0043565
Aev04g1360 301 MobiDBLite consensus disorder prediction 112 133 - -
Aev04g1360 301 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 134 172 - -
Aev04g1360 301 SMART GATA_3 132 184 IPR000679 GO:0006355|GO:0043565
Aev04g1360 301 ProSitePatterns GATA-type zinc finger domain. 138 163 IPR000679 GO:0006355|GO:0043565
Aev04g1360 301 Coils Coil 204 224 - -
Aev04g1360 301 CDD ZnF_GATA 137 165 IPR000679 GO:0006355|GO:0043565
Aev04g1360 301 PANTHER GATA TRANSCRIPTION FACTOR 21-LIKE 29 293 - -
Aev04g1360 301 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 29 293 - -
Aev04g1360 301 MobiDBLite consensus disorder prediction 108 133 - -
Aev04g1360 301 ProSiteProfiles GATA-type zinc finger domain profile. 136 168 IPR000679 GO:0006355|GO:0043565
Aev04g1360 301 Gene3D - 136 174 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1360 Aev-Chr4 9390042 9394446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1360 72 293 C2C2-Gata Transcription Factor Family AT4G26150 42.308 7.31e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev04g1360 GATA 3.2e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1360 - - gmx:100780875 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2669 01 29611864 29613461 Aev04g1360 04 9390042 9394446 PCT