Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1357 ATGGAAGATGATAATGAAGCATCCATCACAGGCCTAACTCTTGGACTTGGAATTGGAGGTGGAGGGTATGGGCTAAAGCAGAAAAAAGTGATGAACAATTCTACTGTTCTTTCACTTGACCTTAATTTAGATGATGATCATCATCATCAAGGGTTATCTTTGAAGAAGAGAACATCATCTTCATCATCAAGCGATGAAGAACACAATAATCATCACAAAACAAATGAAAAGAGAAATGATGAGAAGAACCACAGCAGAAAGAAATTGAGGCTCTCAAAGGACCAATCAGCCATGCTTGAAGATAGCTTCAGGCTTCACACCACTCTTAACCAAGCTCAGAAACAAGCACTTGCTGAGAAATTGAATTTGAAGCAAAGACAAGTCGAAGTTTGGTTTCAGAACAGAAGAGCAAGGACGAAGCTGAAACAAACAGAGGTAGATTGCGAGTTCCTGAGGAAATGTTGTGAGAAATTAACGGATGAGAACATAAGGCTGAAGGAGGAAGTGAAGGAGCTACGTGCTCTGAAAATTGAACCATCATTGTTCATTCAAGTCTCCAAGGCAGCCACTTTGACCTTGTGTTCATCTTGTGAAGAGCAAATGAATAATACTCATAATGAAGAAGAAAAAGATGCTACTGTTATTTCCGATGTCGTCCAAAACAACAATCACAACATGGAGAGCAGCATAGAGAATTAG 699 0.3948 MEDDNEASITGLTLGLGIGGGGYGLKQKKVMNNSTVLSLDLNLDDDHHHQGLSLKKRTSSSSSSDEEHNNHHKTNEKRNDEKNHSRKKLRLSKDQSAMLEDSFRLHTTLNQAQKQALAEKLNLKQRQVEVWFQNRRARTKLKQTEVDCEFLRKCCEKLTDENIRLKEEVKELRALKIEPSLFIQVSKAATLTLCSSCEEQMNNTHNEEEKDATVISDVVQNNNHNMESSIEN* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1357 232 Coils Coil 141 178 - -
Aev04g1357 232 SMART HOX_1 84 146 IPR001356 GO:0003677
Aev04g1357 232 MobiDBLite consensus disorder prediction 60 93 - -
Aev04g1357 232 CDD homeodomain 86 143 IPR001356 GO:0003677
Aev04g1357 232 Pfam Homeobox associated leucine zipper 142 175 IPR003106 GO:0006355|GO:0043565
Aev04g1357 232 ProSiteProfiles 'Homeobox' domain profile. 82 142 IPR001356 GO:0003677
Aev04g1357 232 ProSitePatterns 'Homeobox' domain signature. 117 140 IPR017970 GO:0000981|GO:0006355
Aev04g1357 232 Pfam Homeodomain 86 140 IPR001356 GO:0003677
Aev04g1357 232 SMART halz 142 185 IPR003106 GO:0006355|GO:0043565
Aev04g1357 232 MobiDBLite consensus disorder prediction 50 93 - -
Aev04g1357 232 PANTHER - 58 214 - -
Aev04g1357 232 Gene3D - 90 140 - -
Aev04g1357 232 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9 58 214 - -
Aev04g1357 232 SUPERFAMILY Homeodomain-like 73 143 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1357 Aev-Chr4 9335573 9336917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1357 79 198 Homeobox Transcription Factor Family AT4G16780 67.500 6.68e-56 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev04g1357 Homeodomain 1.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1357 K09338 - gmx:100790522 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2659 01 29562408 29563413 Aev04g1357 04 9335573 9336917 PCT