Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1350 ATGGCAGTGGATCTGGTAGGAGGAGTCCCAAGGGTTATGATGGAAGAACAGCAGGTTGCAACAATACAAGAAGCTGCTTCCGCTGGCTTGAAGAGCATGGAGCATCTAATTCGCCTCCTTGCTTCATCTCATCATCAAACTCCTCCTTCTCCTTCTCCTTCTCCTTCTTCTTCTTATACACACAACAACAATCATAATAGTAATCTTAATCTTAACCTTAACTGCTCCGAACTCACTGATTTCACCGTTTCCAAGTTCAAGCAAGTCATCAACCTACTAAACCGCACTGGCCACGCCCGATTCCGCCGCGCACCACAAAAAGCCCAACCCGAGGCCCAGAGCCCGGGCTTGACTCTAGATTTCTCCAAGCCCACGATTCTAAACTCGAAGCCCGTCAGTGGTAATAATAATAATAATAAAGATAAGGATGAAAGCGCGCTTAGCATATCTCCTCCCGTTTCGACCACCACCTCTTCTTTTATGTCTTCCATCACCGGCGACGCCAGCGTCTCCGACGGCAAGATTGGACCGTTCCTCACTCCTCCGGCGCCGGCTCCATCCTCCGGCAAGCCTCCTCTCTCCTCCTCTCACAAGAAAAGGTGCCACGACGCCGCGTTCTCCGGCAAGGCCTCCTCCTCCGGTCAATGTCATTGCTCTAAAAGAAGGAAATCTCGTGTGAAACGGACGATCCGTGTTCCGGCGATAAGCTCGAAGATCGCCGATATACCGCCAGACGAGTTCTCGTGGAGAAAATACGGTCAGAAACCGATCAAGGGCTCACCTTACCCACGTGGATACTATAAGTGCAGCACGGTGAGAGGGTGTCCGGCGAGGAAGCACGTGGAGAGAGCACAAGACGATCCAAAGATGCTGATTGTGACTTACGAGGGAGACCACCGTCATAACCCTCAGCCCCGCTCGCCGGAAATCGCCACCGCCGCTTTCAACCTCAGATCTAACTGA 963 0.5202 MAVDLVGGVPRVMMEEQQVATIQEAASAGLKSMEHLIRLLASSHHQTPPSPSPSPSSSYTHNNNHNSNLNLNLNCSELTDFTVSKFKQVINLLNRTGHARFRRAPQKAQPEAQSPGLTLDFSKPTILNSKPVSGNNNNNKDKDESALSISPPVSTTTSSFMSSITGDASVSDGKIGPFLTPPAPAPSSGKPPLSSSHKKRCHDAAFSGKASSSGQCHCSKRRKSRVKRTIRVPAISSKIADIPPDEFSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGDHRHNPQPRSPEIATAAFNLRSN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1350 320 Pfam WRKY DNA -binding domain 245 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev04g1350 320 SMART WRKY_cls 243 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev04g1350 320 Gene3D WRKY domain 213 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev04g1350 320 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 18 305 IPR044810 GO:0003700
Aev04g1350 320 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 18 305 - -
Aev04g1350 320 ProSiteProfiles WRKY domain profile. 238 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev04g1350 320 MobiDBLite consensus disorder prediction 101 225 - -
Aev04g1350 320 Pfam Plant zinc cluster domain 198 241 IPR018872 -
Aev04g1350 320 SUPERFAMILY WRKY DNA-binding domain 241 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev04g1350 320 MobiDBLite consensus disorder prediction 111 169 - -
Aev04g1350 320 MobiDBLite consensus disorder prediction 43 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1350 Aev-Chr4 9278990 9280222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1350 1 302 WRKY Transcription Factor Family AT2G24570 50.592 1.28e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev04g1350 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1350 - - gmx:732587 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1350 04 9278990 9280222 Aev04g1350 04 9278990 9280222 ECH
Aev01g2652 01 29521700 29522989 Aev04g1350 04 9278990 9280222 PCT