Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1339 ATGAGTTTCCAAAATGGCTCTCCTCACCGGCCGCCGCCGCCGCCGGATAACGACTTGGAGGCGGGACCTCCCTCCGGTGACTTCGACGACGGTGATTTCTCCGATCCCTTCGACATCACCAGCACTAAGAACGCCTCGATTGAACGCCTTAGGAGATGGAGGCAAGCGGCACTTGTGCTTAATGCTTCTCGCCGATTTCGTTACACCTTGGACTTGAAAAAAGAAGAAGAGAAGAAGCAAATATTGAGAAAGATCAGAGCACATGCTCAAGCCATTAGGGCAGCATATCTTTTCAAAGCAGCTGGTGGCGGCTTTGTGAGTGAAACCACAAAACCTCCTCCGACATCCACTGGTGAATTTCCAATTGGACAAGAGCAACTTGCTTCAGTTTCAAGGGAGCATGATAATGTTGCTCTGCAGCAATATGGAGGGGTTGTAGGGATGTCGAATTTGCTGAAAACCAATTTAGAGAAGGGGATTAATGGTGATGATGCTGACTTACTAAAACGAAGGAATGCATTTGGTTCCAACAATTATCCTCGAAAGAAAGGAAGAAGTTTTTTGATGTTTATGTGGGATGCTTGCAAGGATCTAACCTTGGTTATTTTAATGGTTGCTGCAGCAGCATCATTGGCATTGGGGATAAAATCTGAGGGTATTAAGGAAGGGTGGTATGATGGAGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTGTTGTTACAGCTGTAAGTGACTATAAACAGTCTCTTCAGTTTCGAGACCTAAATGAAGAGAAGAGAAATATACGTTTGGAGGTTATCAGAGGTGGTAGAAGGGTAGAGATCTCGATATATGACATTGTTGTGGGTGATGTTATACCCCTTAATATTGGTGACCAGGTCCCGGCTGATGGAATTCTGATCACTGGTCACTCTCTCGCAATTGATGAGTCAAGTATGACTGGGGAGAGCAAAATTGTGCATAAAGATTCGAAGGACCCATTTATGATGTCTGGGTGTAAAGTCGCTGATGGAAGTGGCACTATGCTGGTAACTGGTGTGGGTATTAATACTGAATGGGGGCTTCTGATGGCTAGCATTTCAGAAGACACTGGCGAAGAAACACCATTGCAGGTCCGCTTAAATGGTGTAGCCACCTTCATTGGTATTGTTGGTCTCTCCGTTGCTGTTGTTGTCCTGATTGTGCTACTGGCTAGATTTTTCTCTGGCCATACCAAAAACCCAGATGGAACTACTCAATTTAAAGCAGGCAAGACGAAAATTGGTGATGCTATTGATGGAGCAATCAAGATAATAACCGTTGCGGTCACCATTGTAGTGGTTGCTGTACCTGAAGGGCTCCCATTAGCAGTTACCTTAACACTGGCCTACTCAATGAGAAAAATGATGGCAGATAAAGCTTTGGTGAGGAGGCTTTCTGCTTGTGAGACAATGGGCTCTGCCACAACTATTTGCAGTGATAAGACGGGCACATTGACTATGAACCAGATGACTGTGGTTGAAGCTTATGCTGGCGGGAAGAAGATTGATCCTCCTGGCAGCAAGTCAGAGCTCTCTTCCAAGCTCCACTCTTTGCTCATTGAAGGTGTCGCACAGAACACTAATGGCAGTGTTTATGTACCTGAGGGTGGCAACGATGTTGAGGTGTCTGGATCACCAACAGAAAAGGCAATTTTACTTTGGGGAATGCAGATTGGGATGAATTTTGAGGCTGCCAGATCAGAGTCATCAATTATTCATGTCTTTCCTTTCAATTCAGAAAAAAAACGAGGCGGGGTTGCAATACAGACGGCTGATTCTGAAGTGCATATACATTGGAAAGGTGCTGCTGAGATAGTCCTAGCCTGCTGTACATGGTATATTGATGCAAATGACCAGTTGGTGGAGATGGATGAAGAGAAGATGACATTTTTCAAGAAAGCTATTGAGGACATGGCTGCTGATAGTCTACGTTGCGTTGCCATTGCATATAGAACACATGAAAAGGAGAATGTTCCAACTAGTGAAGATCAACTAGCTCACTGGTCTTTACCAGAAGATAATCTTGTTTTGCTAGCTATTGTTGGTCTGAAGGATCCTTGTCGACCTGGAGTCAAAGATGCAGTGCATCTTTGCCAAAAAGCTGGGGTTAAGGTTAGAATGGTCACCGGTGACAATGTCAAAACTGCAAGAGCAATTGCTGTGGAATGTGGAATACTTAATTCACTTGCTGATGCTACAGAGCCGACCATTATCGAAGGGAAAACTTTTCGTGCCTTGTCAGATTCAGAGAGAGAAGAAATTGCTGAATCAATATCTGTTATGGGACGGTCATCTCCTAATGACAAGCTGTTGCTTGTGCAAGCATTGAGGAAGAAGGGGCATGTTGTGGCTGTAACTGGGGATGGGACGAATGATGCACCTGCACTACATGAGGCTGATATAGGTCTTGCAATGGGTATTCAAGGCACAGAAGTTGCCAAAGAGAGCTCTGATATCATTATATTGGATGACAATTTCGCTTCAGTTGTGAAGGTTGTTAGATGGGGGCGCTCTGTATATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTAAATGTAGCAGCTCTTGTAATTAATGTCGTTGCTGCAGTTTCCTCTGGTGATGTTCCACTGAATGCAGTGCAGCTTCTGTGGGTGAACCTTATAATGGATACTCTCGGAGCACTAGCATTGGCAACTGAACCACCAACTGATCACCTGATGGATCGGCCTCCAGTGGGCCGAAGAGAACCTCTCATAACAAATATTATGTGGAGGAATTTGTTGATACAGGCAATGTACCAAGTGTGTGTCTTGCTTGTTCTGAATTTCCTAGGCATCAGCATACTGGGTCTGCAGCATGATAACCATGCACATGCAGTCAAAGTGAAAAACACTTTGATCTTCAATGCATTTGTTCTGTCTCAAATCTTTAATGAATTTAATGCACGAAAGCCAGATGAATTCAACATATTCAAAGGAGTCACGAAAAACTACCTCTTTATGGGAATAGTAGGATTAACCGTCGTGCTTCAGATTATCATCGTCGAATTTCTCGGGAAGTTCACTTCAACAGTGCGGCTTAACTGGAAGCAGTGGATCATCTCGGTCGTTATCGGATTCATTAGTTGGCCTCTCGCAGTGATTGGGAAACTGATACCAGTGCCGGAGACTCCCATCAATAACGTATTTTCAAGATTTCATGGTCAAAGTAGTTCGAAAAAGGAACACGAGGCTTCTCAATAG 3252 0.4403 MSFQNGSPHRPPPPPDNDLEAGPPSGDFDDGDFSDPFDITSTKNASIERLRRWRQAALVLNASRRFRYTLDLKKEEEKKQILRKIRAHAQAIRAAYLFKAAGGGFVSETTKPPPTSTGEFPIGQEQLASVSREHDNVALQQYGGVVGMSNLLKTNLEKGINGDDADLLKRRNAFGSNNYPRKKGRSFLMFMWDACKDLTLVILMVAAAASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAVSDYKQSLQFRDLNEEKRNIRLEVIRGGRRVEISIYDIVVGDVIPLNIGDQVPADGILITGHSLAIDESSMTGESKIVHKDSKDPFMMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVVVLIVLLARFFSGHTKNPDGTTQFKAGKTKIGDAIDGAIKIITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAYAGGKKIDPPGSKSELSSKLHSLLIEGVAQNTNGSVYVPEGGNDVEVSGSPTEKAILLWGMQIGMNFEAARSESSIIHVFPFNSEKKRGGVAIQTADSEVHIHWKGAAEIVLACCTWYIDANDQLVEMDEEKMTFFKKAIEDMAADSLRCVAIAYRTHEKENVPTSEDQLAHWSLPEDNLVLLAIVGLKDPCRPGVKDAVHLCQKAGVKVRMVTGDNVKTARAIAVECGILNSLADATEPTIIEGKTFRALSDSEREEIAESISVMGRSSPNDKLLLVQALRKKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRPPVGRREPLITNIMWRNLLIQAMYQVCVLLVLNFLGISILGLQHDNHAHAVKVKNTLIFNAFVLSQIFNEFNARKPDEFNIFKGVTKNYLFMGIVGLTVVLQIIIVEFLGKFTSTVRLNWKQWIISVVIGFISWPLAVIGKLIPVPETPINNVFSRFHGQSSSKKEHEASQ* 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1339 1083 PRINTS Sodium/potassium-transporting ATPase signature 228 248 - -
Aev04g1339 1083 PRINTS Sodium/potassium-transporting ATPase signature 478 499 - -
Aev04g1339 1083 PRINTS Sodium/potassium-transporting ATPase signature 604 622 - -
Aev04g1339 1083 Gene3D - 482 838 IPR023214 -
Aev04g1339 1083 Pfam Ca2+-ATPase N terminal autoinhibitory domain 35 77 IPR024750 GO:0005516
Aev04g1339 1083 Gene3D - 495 693 IPR023299 GO:0000166
Aev04g1339 1083 Pfam Cation transporter/ATPase, N-terminus 144 210 IPR004014 -
Aev04g1339 1083 Gene3D - 45 100 - -
Aev04g1339 1083 Pfam Cation transporting ATPase, C-terminus 878 1055 IPR006068 -
Aev04g1339 1083 SFLD Haloacid Dehalogenase 467 845 - -
Aev04g1339 1083 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 426 508 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev04g1339 1083 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 759 873 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev04g1339 1083 Gene3D - 166 361 - -
Aev04g1339 1083 SUPERFAMILY Calcium ATPase, transmembrane domain M 145 1057 IPR023298 -
Aev04g1339 1083 Gene3D - 193 1046 - -
Aev04g1339 1083 CDD P-type_ATPase_Ca_PMCA-like 167 926 - -
Aev04g1339 1083 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 133 1057 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Aev04g1339 1083 PANTHER CATION TRANSPORTING ATPASE 24 1072 - -
Aev04g1339 1083 MobiDBLite consensus disorder prediction 1 40 - -
Aev04g1339 1083 Pfam E1-E2 ATPase 263 463 - -
Aev04g1339 1083 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 492 690 IPR023299 GO:0000166
Aev04g1339 1083 ProSitePatterns E1-E2 ATPases phosphorylation site. 487 493 IPR018303 -
Aev04g1339 1083 SMART Cation_ATPase_N_a_2 144 215 IPR004014 -
Aev04g1339 1083 SUPERFAMILY Calcium ATPase, transduction domain A 263 358 IPR008250 -
Aev04g1339 1083 Pfam haloacid dehalogenase-like hydrolase 482 807 - -
Aev04g1339 1083 PANTHER CALCIUM-TRANSPORTING ATPASE 24 1072 - -
Aev04g1339 1083 SFLD p-type atpase 467 845 IPR044492 -
Aev04g1339 1083 PRINTS P-type cation-transporting ATPase superfamily signature 817 829 - -
Aev04g1339 1083 PRINTS P-type cation-transporting ATPase superfamily signature 793 812 - -
Aev04g1339 1083 PRINTS P-type cation-transporting ATPase superfamily signature 309 323 - -
Aev04g1339 1083 PRINTS P-type cation-transporting ATPase superfamily signature 485 499 - -
Aev04g1339 1083 PRINTS P-type cation-transporting ATPase superfamily signature 686 697 - -
Aev04g1339 1083 PRINTS P-type cation-transporting ATPase superfamily signature 708 718 - -
Aev04g1339 1083 SUPERFAMILY HAD-like 483 898 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1339 Aev-Chr4 9174088 9195941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1339 18 1064 Primary Pumps ATPases AT5G57110 75.668 0.0 1605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1339 K01537 - gmx:100820121 1825.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1339 04 9174088 9195941 Aev04g1339 04 9174088 9195941 ECH
Aev01g2645 01 29473142 29485714 Aev04g1339 04 9174088 9195941 PCT