Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1329 ATGGAGAATATTGGAGAGTACAAGCATTATTGGGAGACCAACATGTTCCTCCAAACCCAAGAGCTTGACAGTTGGGGATTGGATGAGGCCTTATCAGGGTACTATGATTCGAGTTCACCAGATGGAGCAGCTTCATCGGCAGCATCGAAGAACATAGTCTCAGAGAGGAATAGAAGGAAGAAGCTCAATGAAAGGCTTTTCGCACTTAGATCGGTGGTCCCCAACATTAGCAAGATGGATAAAGCTTCTATAATTAAGGATGCAATTGAGTATATCCAACACTTGCATGAGCAAGAGAAGATGATAGAAGCAGAGATAATGGAGTTAGAGTCTGGAATGTTGAAGAAGAATCCAAACTATGACTTTGAGCAAGAGCTTCCTGTCTTGTTGAGGTCCAAGAAGAAGAGAACAGAGCACCTTTATGATTCTGTCACTTCTAGAAACTCCCCAATTGAAATACTTGAGCTGAGGGTAACATACATGGGAGAGAGAACAATTGTGGTAAGCTTGACATGCAGCAAAAGGACAGACACAATGGTAAAACTCTGTGAGGTCTTCGAATCTTTGAACCTCAAAATCATCACTGCAAATATCACTTCCTTCTCTGGCAGGCTTTTGAAGACAGTCTTCATTGAGGCAGATGAAGAAGAGAAAGATCTTTTGCAGATAAAGATCCAAACAGCAATTCAAGCCCTTAATGATCCTCTAAGCCCTATGAGCATTTGA 726 0.4174 MENIGEYKHYWETNMFLQTQELDSWGLDEALSGYYDSSSPDGAASSAASKNIVSERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIEYIQHLHEQEKMIEAEIMELESGMLKKNPNYDFEQELPVLLRSKKKRTEHLYDSVTSRNSPIEILELRVTYMGERTIVVSLTCSKRTDTMVKLCEVFESLNLKIITANITSFSGRLLKTVFIEADEEEKDLLQIKIQTAIQALNDPLSPMSI* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1329 241 SMART finulus 52 101 IPR011598 GO:0046983
Aev04g1329 241 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 235 - -
Aev04g1329 241 Pfam Helix-loop-helix DNA-binding domain 53 96 IPR011598 GO:0046983
Aev04g1329 241 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 111 IPR036638 GO:0046983
Aev04g1329 241 Coils Coil 211 231 - -
Aev04g1329 241 Gene3D - 45 118 IPR036638 GO:0046983
Aev04g1329 241 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Aev04g1329 241 PANTHER TRANSCRIPTION FACTOR BHLH35 2 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1329 Aev-Chr4 8998836 9010201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1329 1 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 66.055 2.35e-89 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev04g1329 HLH 2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1329 - - gmx:100817978 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2639 01 29403367 29406591 Aev04g1329 04 8998836 9010201 PCT