Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1324 ATGCAGGATACTGTGGAGTTAAATAACAGAGGAATCAGGAAATCCAATCATTCCAAGGAACATACTGATTCAAAGCTTGATTCTTCACTGAGATTCAAAACAAGTAGCACAAAAGGCCAAGGGAATAAGCATAAATTGAAATCAAGATCTCACAAAGTCAGAGTTGGCAGAAACACATCAAGGAGGACAGTTGCTGATTCTTCCAACAAGGGATCCATCAAGAATTCTTCAAATAAAAAATTGATTATTGAACAAACCATGCATAAAAATGATGGGAAGTCTTCACAGATGCTGTCTTCAACAAAGCTAGAGGATGAAAAATTTTCTGTTTATTCTATAGAAGAGGGGAAAGATGTTGATGGTGAGGTAAAGATTCAAAAACTCAAGAGAAGGAGAAAGAAGAAAAGACGAAGGGATAATGTGGGTCTTGATGATGCTTCACGCTTGCAGAGGAGAACAAGGTACCTCTTAATCAAAATGAAGCTAGAACAGAACCTTATTGATGCTTACTCTGGAGAAGGTTGGAAAGGTCAAAGTCGAGAGAAGATTAGGCCAGAAAAAGAGCTACAAAGAGCAAAAAAGCAGATTTTGAAATGTAAACTTGGTATTCGAGATGTCATTCACCAACTGGATTCTCTTAGTTCAGTGGGGAGCATTGAAGATTCTGTCATTGCTCCTGATGGATCTGTTTATCATGAACATATATTCTGCGCAAACTGCAAATTGCGTGAAGCTTTCCCTGATAATGACATTATACTCTGTGATGGCACATGCAATCGTGGTTTTCACCAAAAATGTCTCGATCCTCCTTTGGACACTGAAAATATTCCGCCCGGAGACCAAGGCTGGTTTTGCAAGTTTTGTGAATGTAAGATGGAAATACTGGAGTCAACAAATGCTCATCTTGGGACTCAATTCTCCTTGGATAGTACTTGGAAGGACGTATTCAAGGAAGAGGCTGCAATACCTGATGGTGACACTGCTTTACTAAATCCGGAAGAAGAATGGCCATCGGATGATCCTGAAGATGACGATTATAATCCAGACAGGAGAGAAGACAGTCACAACATCAATGCAGAAGGAACTGATGACAGTCTATCTGATTCAAGTAGTTCTACCAGTATTTGGTCCTTAAATGGTGAATATTCTCATGTTGATGAAGGTGTCGGCCATGAATATCTTTCTGGTTATAGCTGCATAGATTCTGATGTAACTGGGGAAATAGCATGTGGCCGCAGGCAGCGTAAAGCAGTTGACTACAGGAAACTTTATGATGAAATGTTTAAGGATGCTCCTCCATATGAACAAGTGAGTGAAGATGAAGACTGGGGTCCTGGCAAAAGAAAGCGAGGAGAGAAGGAATCCGATGCCGCTAATACTCTGATGACTCTGCATGAAAGTGATAATAAATATTCCAATAATGAGAACAATGATACCATAAGAGAGGGTTCACACATACATACAAAAAGGCCTTGTTTCAGGATTCCACTTCATGCAGTTGAGAGGCTTCGCCAAGTTTTTGCAGAGAATGAACTTCCTCCAAAATCTGTGAAGGAAGATCTTTCAAAAGAGTTGGGAATTGATGTTGCTAAGGTTAGCAAATGGTTCAAAAATGCACGTTACATGTCACTTAAAACCCGGAAGCACCAAGAAGAAGGAGTAGAACAGCCTCAGAGTTTAGGTAAAACCTTGAAGGATTCTAGATCACAAAATGTAGAAAAAGATGAGTTTTCTAACAAATTGAAGGCCTCAAAAATTTCTGCGGATCGTTCGCAGAAGAGTGTTAAAAATGTTGATGATATAGAGATAACAAAGTCATCTAATAGTCTTTTGAAGAAGAAGCAACCAAAAGTATCTCCCCACAAACCAAGAGAAAATGGCAACAAGGACTTCAATGATGGCAATGATAATGTTAGCTTGAAGAAACTGTTAAGAGAAAAGAAAAGGAAGGTGAATTTAGTATTTGGAGGAAACTCTGAGGAAGCAGAAATAGAATTTGAAAGACTTAGCAGATTGAAGATTAAATTAGATAGCATTAGGCAAAAGTTAGCTGGAGTTGAACACTTAAGATCAAAGGGTTCAAATGAACCTTATTTGAATAAACCATCTGTTATATATGTTCCCATAGCTGAGTTAAGGGAAAAGGTTGAATAA 2154 0.3863 MQDTVELNNRGIRKSNHSKEHTDSKLDSSLRFKTSSTKGQGNKHKLKSRSHKVRVGRNTSRRTVADSSNKGSIKNSSNKKLIIEQTMHKNDGKSSQMLSSTKLEDEKFSVYSIEEGKDVDGEVKIQKLKRRRKKKRRRDNVGLDDASRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRAKKQILKCKLGIRDVIHQLDSLSSVGSIEDSVIAPDGSVYHEHIFCANCKLREAFPDNDIILCDGTCNRGFHQKCLDPPLDTENIPPGDQGWFCKFCECKMEILESTNAHLGTQFSLDSTWKDVFKEEAAIPDGDTALLNPEEEWPSDDPEDDDYNPDRREDSHNINAEGTDDSLSDSSSSTSIWSLNGEYSHVDEGVGHEYLSGYSCIDSDVTGEIACGRRQRKAVDYRKLYDEMFKDAPPYEQVSEDEDWGPGKRKRGEKESDAANTLMTLHESDNKYSNNENNDTIREGSHIHTKRPCFRIPLHAVERLRQVFAENELPPKSVKEDLSKELGIDVAKVSKWFKNARYMSLKTRKHQEEGVEQPQSLGKTLKDSRSQNVEKDEFSNKLKASKISADRSQKSVKNVDDIEITKSSNSLLKKKQPKVSPHKPRENGNKDFNDGNDNVSLKKLLREKKRKVNLVFGGNSEEAEIEFERLSRLKIKLDSIRQKLAGVEHLRSKGSNEPYLNKPSVIYVPIAELREKVE* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1324 717 MobiDBLite consensus disorder prediction 547 637 - -
Aev04g1324 717 MobiDBLite consensus disorder prediction 567 600 - -
Aev04g1324 717 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 13 688 - -
Aev04g1324 717 PANTHER POLYCOMB PROTEIN PCL 13 688 - -
Aev04g1324 717 SMART HOX_1 488 550 IPR001356 GO:0003677
Aev04g1324 717 SMART PHD_3 236 289 IPR001965 -
Aev04g1324 717 SUPERFAMILY FYVE/PHD zinc finger 228 294 IPR011011 -
Aev04g1324 717 MobiDBLite consensus disorder prediction 333 347 - -
Aev04g1324 717 ProSiteProfiles 'Homeobox' domain profile. 486 546 IPR001356 GO:0003677
Aev04g1324 717 MobiDBLite consensus disorder prediction 620 637 - -
Aev04g1324 717 MobiDBLite consensus disorder prediction 1 79 - -
Aev04g1324 717 Pfam Homeodomain 498 541 IPR001356 GO:0003677
Aev04g1324 717 Coils Coil 669 689 - -
Aev04g1324 717 MobiDBLite consensus disorder prediction 10 28 - -
Aev04g1324 717 CDD homeodomain 489 550 IPR001356 GO:0003677
Aev04g1324 717 MobiDBLite consensus disorder prediction 60 79 - -
Aev04g1324 717 MobiDBLite consensus disorder prediction 38 58 - -
Aev04g1324 717 Pfam PHD-finger 236 291 IPR019787 -
Aev04g1324 717 Gene3D - 488 554 - -
Aev04g1324 717 ProSiteProfiles Zinc finger PHD-type profile. 234 291 IPR019787 -
Aev04g1324 717 ProSitePatterns Zinc finger PHD-type signature. 237 288 IPR019786 -
Aev04g1324 717 SUPERFAMILY Homeodomain-like 488 551 IPR009057 -
Aev04g1324 717 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 285 IPR013083 -
Aev04g1324 717 MobiDBLite consensus disorder prediction 435 456 - -
Aev04g1324 717 CDD PHD_PRHA_like 236 288 IPR045876 -
Aev04g1324 717 MobiDBLite consensus disorder prediction 323 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1324 Aev-Chr4 8962556 8967010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1324 136 557 Homeobox Transcription Factor Family AT4G29940 56.164 4.03e-153 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Aev04g1324 Homeodomain 4.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1324 - - gmx:100787118 939.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2631 01 29365176 29369141 Aev04g1324 04 8962556 8967010 PCT