Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1280 ATGGAGTGGGACAGCAATTCCGATCTCAGCGCCGACGACGACGACGCTGCAATTGGCCTTGGCCTTGGCCCAATTCCATTCCCTCTTCTCCAAACGGCGCCCTGCGGCTTCGTCGTTACCGATGCGCTTGAACCCGACCACCCTATCATCTACGTTAACACCGTCTTCGAGATCGTTACTGGCTACCGTGCCGAGGAAGTCCTCGGTCGCAATTGCCGTTTCTTGCAGTGTCGAGGTCCATTTGCTAAGAGGAGACATCCATTGGTGGACTCAACTGTAGTTTCAGAAATTAGAAGATGCCTTGAGGAAGGGGTTGAATTCCAAGGTGAGTTGCTGAACTTTAGGAAAGATGGATCTCCACTTATGAACAGATTGCGGCTGACACCTATATATGGAGATGATGAGATAACTCATGTCATTGGAATCCAGCTCTTCACAGAGGCAAACATTGATCTTGGTCCTGTTCTGGGTTCTACGATTAAGGAGTCTGCTAAATCATCAGATCAGTTTCGTTCTTTGCTTTCCTCGTTGCATCCTCTTCCGGTGGGGGACAGGAATGTGACTCGCGGCCTTTGTGGGATATTGCAATTGAGTGATGAGGTAATTTCTCTCAAGATCCTTGCTCTCTTAACTCCAAGAGATATTGCTTCTGTTGGTTCTGTCTGTAGGCGATTGTATGACCTGACAAAAAATGAAGACCTATGGAGAATGGTATGCCAAAATGCATGGGGCAGTGAGACTACTCGTGTTTTAGAGACTGTTCCTGGTGCAAGGAGACTTGGATGGGGTCGGTTGGCACGGGAACTGACCACGCTTGAAGCAGCAGCATGGAGGAAACTGACTGTTGGAGGTGCTGTTGAACCCTCACGCTGTAATTTTAGTGCTTGTGCAGTTGGTAATAGGGTTGTTCTATTTGGTGGTGAAGGGGTTAACATGCAACCTATGAATGACACCTTTGTATTGGATCTCAATTCTAGTAATCCTGAGTGGCAACATGTCCAGGTGAGCTCTCCTCCACCTGGTCGTTGGGGCCACACACTTTCTTGTGTTAATGGTTCTCGCTTGGTTGTATTTGGAGGCTGTGGTAGACAAGGCCTGCTCAATGATGTGTTTGTTCTAGACCTGGATGCAAAGCCTCCAACTTGGCGGGAAATTTCTGGATTGGCACCACCACTTCCTAGATCATGGCACAGTTCTTGTACTCTTGATGGTACTAAGTTGATAGTTTCTGGTGGCTGTGCTGATTCTGGAGTACTCTTGAGTGATACTTTCCTCCTAGATTTGTCAATGGAGAAACCTGTCTGGAGAGAGATCCCAGTGACATGGACTCCACCTTCTCGTCTGGGCCACACACTATCTGTTTATGGCGGTAGGAAAATACTGATGTTTGGGGGTCTGGCCAAGAGTGGGCCCCTACGTTTTCGCTCCAGTGATGTATTCACAATGGATTTAAGCGAGGATGAACCATGCTGGAGATGTGTAACTGGGAGTGCCATGCCTGGTGCTGGAAATCCTGGGGGTATAGCTCCTCCTCCTAGACTTGATCATGTGGCTGTCAGTCTTCCAGGTGGGAGAATTCTGATATTCGGTGGCTCTGTTGCAGGCCTTCATTCTGCCTCCCAACTTTACATCCTTGATCCAACTGACGAGAAGCCTACATGGAGAATCCTAAATGTACCTGGGCGCCCTCCACGATTTGCTTGGGGACACAGTACATGTGTTGTTGGAGGGACAAGAGCTATTGTATTGGGTGGTCAAACTGGGGAGGAGTGGATGCTAAGCGAGCTCCATGAACTTTCCCTGGCAAGTTCTGCCATCTAG 1821 0.4876 MEWDSNSDLSADDDDAAIGLGLGPIPFPLLQTAPCGFVVTDALEPDHPIIYVNTVFEIVTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSTVVSEIRRCLEEGVEFQGELLNFRKDGSPLMNRLRLTPIYGDDEITHVIGIQLFTEANIDLGPVLGSTIKESAKSSDQFRSLLSSLHPLPVGDRNVTRGLCGILQLSDEVISLKILALLTPRDIASVGSVCRRLYDLTKNEDLWRMVCQNAWGSETTRVLETVPGARRLGWGRLARELTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSSNPEWQHVQVSSPPPGRWGHTLSCVNGSRLVVFGGCGRQGLLNDVFVLDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVTWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEDEPCWRCVTGSAMPGAGNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASSAI* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1280 606 Gene3D - 421 604 IPR015915 GO:0005515
Aev04g1280 606 Gene3D - 269 420 IPR015915 GO:0005515
Aev04g1280 606 Pfam Galactose oxidase, central domain 290 340 - -
Aev04g1280 606 Pfam Kelch motif 514 561 IPR011498 GO:0005515
Aev04g1280 606 Pfam Kelch motif 447 496 IPR011498 GO:0005515
Aev04g1280 606 PANTHER ADAGIO PROTEIN 1-LIKE 1 605 - -
Aev04g1280 606 TIGRFAM sensory_box: PAS domain S-box protein 46 142 IPR000014 -
Aev04g1280 606 SUPERFAMILY Galactose oxidase, central domain 277 591 IPR011043 -
Aev04g1280 606 Pfam Galactose oxidase, central domain 352 401 - -
Aev04g1280 606 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 1 605 - -
Aev04g1280 606 CDD PAS 33 145 IPR000014 -
Aev04g1280 606 ProSiteProfiles PAS repeat profile. 29 104 IPR000014 -
Aev04g1280 606 Gene3D PAS domain 27 154 - -
Aev04g1280 606 Gene3D - 192 238 - -
Aev04g1280 606 Pfam F-box-like 202 240 IPR001810 GO:0005515
Aev04g1280 606 SUPERFAMILY F-box domain 186 255 IPR036047 GO:0005515
Aev04g1280 606 SUPERFAMILY PYP-like sensor domain (PAS domain) 33 143 IPR035965 -
Aev04g1280 606 Pfam PAS domain 34 142 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1280 Aev-Chr4 8391543 8395851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1280 30 144 AGC Kinase Gene Family AT5G58140 42.241 5.09e-20 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1280 K12115 - gmx:100802828 1107.05