Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1279 ATGGTGAAGATTGGTATTTTGATTTGTGTATGCTTTGAAAGATACAAAAGAGGAAATGGGTCAGTTAGTCCAGACTCACAATTTCTGACAATAACTATGGACAAATTCCTGAATGACATCGAAAGGGAGAAGCCAATCAGATTTTCTGATCAACAACTAAGGATTGCAACTGATAACTACTCCAATTTGTTGGGGTCAGGAGGTTTTGGAGCAGTTTACAAGGGAAGTTTCAGTAATGGGGTCATTGTTGCTGTTAAGGTTCTGTTTGGAAAAAGCTCTGATAAGAGAATTGAGGAGCAGTTTATGGCAGAAATGGCCACAATTGGAAGAGTTCATCACTTCAATCTTGTTCGCCTCTATGGCTTCTGTTTCGAAAGGAACTTGATAGCACTTGTTTATGAGTACATGGGGAATGGTTCACTTGACAAGTATCTGTTTCATGAAGACAGGATTTTAGAGTTTGAAAAGCTTCAAGAGATTGCTATTGGCACTGCCAGAGGAATTGCATATTTGCATGAAGAGTGCCAACAGAGAATAATCCACTATGACATAAAGCCAGAGAACATTCTCTTGGACAACAATTTCAATCCTAAAGTTGCCGATTTCGGGTTGGCGAAACTATGCAGCAGGGAAAATACTCATGTGACAATGACTGGAGGCAGGGGGACTCCCGGCTACGCCGCGCCGGAGCTCTGGATGCCGTTTCCAGTGACTCACAAGTGTGATGTTTACAGCTTTGGAATGTTGCTATTTGAGATCATTGGTAGGAGAAGGAACCTTGACATTAAACTTCCAGAGAGCCAAGAATGGTTCCCAATTTGGGTTTGGAAAAAATTTGATGGTGGAGAATTGGATGAGTTAGTAACTATAGTATGTGGAATTGATGAGAAATATAAAGAGATTGCAGAAAGAATGGTTAAGGTAGCACTTTGGTGTGTTCAGTATAGGCCAGAATCAAGGCCTATGATGAGTTTTGTAGTGAAAATGTTGGAAGGTTCTGCAGAAATTCCACATCCTTTGAACCCTTTTCAACACATCACAGATGGTAGTATTGCAGCTCCATTCCAAATTTCAGAGACTTATACTGATACAAGTATTTATTCTGGCTCTTCTGTTATGGTAATTGACTCTTCTAGTATTGTATGTGCTACTCCTATTATGAGGAAGTATGAGATTGAACTAGCCTCTAGCATGGGATGA 1200 0.4025 MVKIGILICVCFERYKRGNGSVSPDSQFLTITMDKFLNDIEREKPIRFSDQQLRIATDNYSNLLGSGGFGAVYKGSFSNGVIVAVKVLFGKSSDKRIEEQFMAEMATIGRVHHFNLVRLYGFCFERNLIALVYEYMGNGSLDKYLFHEDRILEFEKLQEIAIGTARGIAYLHEECQQRIIHYDIKPENILLDNNFNPKVADFGLAKLCSRENTHVTMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNLDIKLPESQEWFPIWVWKKFDGGELDELVTIVCGIDEKYKEIAERMVKVALWCVQYRPESRPMMSFVVKMLEGSAEIPHPLNPFQHITDGSIAAPFQISETYTDTSIYSGSSVMVIDSSSIVCATPIMRKYEIELASSMG* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1279 399 SUPERFAMILY Protein kinase-like (PK-like) 42 331 IPR011009 -
Aev04g1279 399 SMART serkin_6 58 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g1279 399 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 396 IPR045874 GO:0004672
Aev04g1279 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Aev04g1279 399 ProSiteProfiles Protein kinase domain profile. 58 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g1279 399 Pfam Protein kinase domain 62 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g1279 399 Gene3D Phosphorylase Kinase; domain 1 32 135 - -
Aev04g1279 399 ProSitePatterns Protein kinases ATP-binding region signature. 64 86 IPR017441 GO:0005524
Aev04g1279 399 Gene3D Transferase(Phosphotransferase) domain 1 136 338 - -
Aev04g1279 399 PANTHER PUTATIVE-RELATED 5 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1279 Aev-Chr4 8387957 8389156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1279 47 367 Receptor kinase-like Gene Family AT5G38280 41.641 1.86e-78 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Aev04g1279 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1279 - - gmx:100803355 627.091