Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1278 ATGGTTGAAAAGATGAAGAAAAGCAACTTTGAAGTGTTGGGAATGTGCTGTGCTACAGAGGCTGCACTAGTGGAAAGAATTGTGAAGCCTCTTGATGGTGTCAAACATTTCTCTGTTATTGTCCCAACAAAAACAGTAACTGTGGTCCATGATGCTGATTTAATTTCTGAGTCACAGATTGTTAGTGCACTGAATAGAGCAAGGCTTGAAGCAAGTTTGAGAGTACAAGGAGAGACCAATAATGAAAAGAAGTGGCCAGACTTACCTACATTGGCTTGTGGCTTGTTGCTGGCTCTTTCATTCTTCAAGTACATGTATCAACCTTTGGATTGGTTTGCTCTTGGTTCTGTTGCCATTGGCTTCCCTAGAGTTCTATTCAGAGCCATTGCTTCCATTATGGCTCTTACTCTTAACATCAATATCCTGGTTCTGTTATCAGTGTGTGCTACTGCTGCTTTACACGATTTTTGGGAGGCTGGAGTGATCATATTCCTATTTTCCATTGCTCAGTGGCTTGAGACAAGAGCTACTCACAAGGCAATGGTTTCCATGTCCACTTTAATGAGCATGGCTCCTCAAAAGGCCATTGTAGCCGATACCGGCGAACATGTTGATGTCAATGATGTTAAGATCAACACCATCCTTGCAGTCAAGGCTGGTGATGCTGTTCCTCTAGATGGAGTTGTGGTGGAAGGAAAGTGTGAAGTTGATGAAAAGATGTTAACAGGAGAAGCATTCCCTGTCACCAAAGAGTTGGATTCAGTTGTTTGGGCTGGAACCATTAATCTGAATGGGTATATAAGTGTTAAAACTACTGTGTTGGCAAAAGATACTGTGGTGGCAAGAATGTCAAAGCTAGTTGAAGAGGCTCATAGCAGAAAATCTAGAGCACAAAGATTCATAGACCATTTTGCTAAGTACTATATTCCTGTGGTTGTCCTGATTTCAGCTGGCATTGCTGTGATTCCAGCTGCATTAAGAGTTCATGATGTTGGCCCTTGGATTCATCTAGCAATTGTGGTTTTATTGAGTGCATGCCCTTGTGCTCTCATCCTCTCCACACCTGTTGCAATCTTTTGTGCACTCACAAAAGCTGCAACAACTGGTTTACTGCTAAAAGGAGGAGATTATCTTGAAACTCTTTCTGGAGTTAAGACAGTGGCTTTTGATAAAACAGGCACAATAACAAGAGGAGAGTTCACTGTCACAGATTTTTGTGCTGTTGTGGATGATATTAGCATTGAAACCTTGTTGTACTGGGTTTCAAGTGTTGAGAGTAAATCAAGTCATCCTATGGCAGCTGCACTGGTGGAATATGGAATCTTGCACTCTATCAAACCACTCCCTGAGAATGTGGAGGATTTTCAGAATTTTCCTGGGGAAGGAGTTTTTGGTAAAATTGATGGGAAGGATATCTTTATAGGAAATAGGAGAATTGGTGTCAGAGCTGGTTGTGAAGATCCAATGTTTCAAATCAAAGAAGAAAGAAATGGTTATATTTTCTGTGGACCAACTCTGATTGGAGTATTCAGCCTAGCTGATACTTGCAGATCAGGTGCTTTGGAGGCAATTGAGCAGCTAAAGTCATTAGGTGTAAGATCAGTGATGCTCACAGGTGATAGCACTCAGGCTGCTAAGTATGTTGAGAATCAGTTGAACCATGCTCTAGACAATGTTCATGCAGAGCTTCTACCTGTTGAAAAGGCAGTGATTATTGAGAATTTGAAGAAAGAAGGGCCAATAGCCATGATCGGAGATGGCGTGAACGATGCTCCGGCTTTAGCTATAGCTGATATCGGTATCTCAATGGGGATATCTGGTTCAGCTCTTGCAATTGAGACAGGCAATGCAATCCTCATGTCGAATGACATCCGGAAAATACCGGAAGCCATTGAGTTAGCAAGAAAAACAACTAGGAAGCTCATTGAGAATGTCATTGTTTCAATTGGCACAAAGAGTGCTATACTAGCATTGGCAATTGCAGGGTATCCAATAATATGGCTTGCTGTGCTTACTGATGTTGGGACCTGTTTACTTGTGATTCTCAATAGCATGTTAATTTTACAAGACAAATCCAAACATGAAAAAGGGCCTAAAAGATCTAAATACAACACCTTCTCAGCAGATTTGACCAAAACTCTTGTGGACAAACAAAGGGATATTGAGGAGCAACAAGATCTTCTTAATGAAGTAAAGTGTGGTGATGAAAAAATGGTCAGTGGTGAAGTTCATGCAGTGAAATCTTGCAGTGATTGCTGCTTAGACAAAGCCAAAATGTGCGAAGACTCGTCGTCGCGCAGAGCAAATAATATCTCTTATTGTTGCCAGTTGCTAAACAAAGAAGTCCAAACCAAGACTGAAAAATGTTGCAGTGAATCTGTAACAATTGTAGCAGAAGATGCTATCTCAGAGTTGTCTGAGACAAGTGCAAGAACCAAGTGCTGCAAAAAAGGATGCTGTGATGATCATGTTAGTAATCTTGGCCTACAAGAAATTGTTATCAAGTGA 2508 0.4115 MVEKMKKSNFEVLGMCCATEAALVERIVKPLDGVKHFSVIVPTKTVTVVHDADLISESQIVSALNRARLEASLRVQGETNNEKKWPDLPTLACGLLLALSFFKYMYQPLDWFALGSVAIGFPRVLFRAIASIMALTLNINILVLLSVCATAALHDFWEAGVIIFLFSIAQWLETRATHKAMVSMSTLMSMAPQKAIVADTGEHVDVNDVKINTILAVKAGDAVPLDGVVVEGKCEVDEKMLTGEAFPVTKELDSVVWAGTINLNGYISVKTTVLAKDTVVARMSKLVEEAHSRKSRAQRFIDHFAKYYIPVVVLISAGIAVIPAALRVHDVGPWIHLAIVVLLSACPCALILSTPVAIFCALTKAATTGLLLKGGDYLETLSGVKTVAFDKTGTITRGEFTVTDFCAVVDDISIETLLYWVSSVESKSSHPMAAALVEYGILHSIKPLPENVEDFQNFPGEGVFGKIDGKDIFIGNRRIGVRAGCEDPMFQIKEERNGYIFCGPTLIGVFSLADTCRSGALEAIEQLKSLGVRSVMLTGDSTQAAKYVENQLNHALDNVHAELLPVEKAVIIENLKKEGPIAMIGDGVNDAPALAIADIGISMGISGSALAIETGNAILMSNDIRKIPEAIELARKTTRKLIENVIVSIGTKSAILALAIAGYPIIWLAVLTDVGTCLLVILNSMLILQDKSKHEKGPKRSKYNTFSADLTKTLVDKQRDIEEQQDLLNEVKCGDEKMVSGEVHAVKSCSDCCLDKAKMCEDSSSRRANNISYCCQLLNKEVQTKTEKCCSESVTIVAEDAISELSETSARTKCCKKGCCDDHVSNLGLQEIVIK* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1278 835 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 139 686 IPR027256 GO:0006812|GO:0016021|GO:0019829
Aev04g1278 835 SUPERFAMILY HMA, heavy metal-associated domain 3 73 IPR036163 GO:0046872
Aev04g1278 835 PRINTS Cadmium-transporting ATPase signature 253 269 IPR027256 GO:0006812|GO:0016021|GO:0019829
Aev04g1278 835 PRINTS Cadmium-transporting ATPase signature 174 194 IPR027256 GO:0006812|GO:0016021|GO:0019829
Aev04g1278 835 PRINTS Cadmium-transporting ATPase signature 21 42 IPR027256 GO:0006812|GO:0016021|GO:0019829
Aev04g1278 835 PRINTS Cadmium-transporting ATPase signature 10 19 IPR027256 GO:0006812|GO:0016021|GO:0019829
Aev04g1278 835 PRINTS Cadmium-transporting ATPase signature 272 286 IPR027256 GO:0006812|GO:0016021|GO:0019829
Aev04g1278 835 PRINTS P-type cation-transporting ATPase superfamily signature 508 519 - -
Aev04g1278 835 PRINTS P-type cation-transporting ATPase superfamily signature 388 402 - -
Aev04g1278 835 PRINTS P-type cation-transporting ATPase superfamily signature 237 251 - -
Aev04g1278 835 PRINTS P-type cation-transporting ATPase superfamily signature 530 540 - -
Aev04g1278 835 PRINTS P-type cation-transporting ATPase superfamily signature 584 603 - -
Aev04g1278 835 Pfam Heavy-metal-associated domain 10 64 IPR006121 GO:0046872
Aev04g1278 835 Gene3D - 1 75 - -
Aev04g1278 835 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 139 688 - -
Aev04g1278 835 ProSitePatterns Hypothetical cof family signature 2. 584 606 - -
Aev04g1278 835 Gene3D - 399 516 IPR023299 GO:0000166
Aev04g1278 835 CDD P-type_ATPase_HM 90 686 - -
Aev04g1278 835 Gene3D - 379 635 IPR023214 -
Aev04g1278 835 SUPERFAMILY Calcium ATPase, transduction domain A 200 287 IPR008250 -
Aev04g1278 835 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 3 804 - -
Aev04g1278 835 Pfam haloacid dehalogenase-like hydrolase 384 598 - -
Aev04g1278 835 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 3 804 - -
Aev04g1278 835 Gene3D - 177 291 - -
Aev04g1278 835 ProSitePatterns E1-E2 ATPases phosphorylation site. 390 396 IPR018303 -
Aev04g1278 835 SUPERFAMILY HAD-like 386 685 IPR036412 -
Aev04g1278 835 Pfam E1-E2 ATPase 195 366 - -
Aev04g1278 835 ProSiteProfiles Heavy-metal-associated domain profile. 7 73 IPR006121 GO:0046872
Aev04g1278 835 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 504 668 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev04g1278 835 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 161 407 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev04g1278 835 CDD HMA 10 72 IPR006121 GO:0046872
Aev04g1278 835 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 382 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1278 Aev-Chr4 8381053 8386914 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1278 3 796 Primary Pumps ATPases AT4G30110 55.860 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1278 K01534 - gmx:100815324 1199.88