LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g1278	ATGGTTGAAAAGATGAAGAAAAGCAACTTTGAAGTGTTGGGAATGTGCTGTGCTACAGAGGCTGCACTAGTGGAAAGAATTGTGAAGCCTCTTGATGGTGTCAAACATTTCTCTGTTATTGTCCCAACAAAAACAGTAACTGTGGTCCATGATGCTGATTTAATTTCTGAGTCACAGATTGTTAGTGCACTGAATAGAGCAAGGCTTGAAGCAAGTTTGAGAGTACAAGGAGAGACCAATAATGAAAAGAAGTGGCCAGACTTACCTACATTGGCTTGTGGCTTGTTGCTGGCTCTTTCATTCTTCAAGTACATGTATCAACCTTTGGATTGGTTTGCTCTTGGTTCTGTTGCCATTGGCTTCCCTAGAGTTCTATTCAGAGCCATTGCTTCCATTATGGCTCTTACTCTTAACATCAATATCCTGGTTCTGTTATCAGTGTGTGCTACTGCTGCTTTACACGATTTTTGGGAGGCTGGAGTGATCATATTCCTATTTTCCATTGCTCAGTGGCTTGAGACAAGAGCTACTCACAAGGCAATGGTTTCCATGTCCACTTTAATGAGCATGGCTCCTCAAAAGGCCATTGTAGCCGATACCGGCGAACATGTTGATGTCAATGATGTTAAGATCAACACCATCCTTGCAGTCAAGGCTGGTGATGCTGTTCCTCTAGATGGAGTTGTGGTGGAAGGAAAGTGTGAAGTTGATGAAAAGATGTTAACAGGAGAAGCATTCCCTGTCACCAAAGAGTTGGATTCAGTTGTTTGGGCTGGAACCATTAATCTGAATGGGTATATAAGTGTTAAAACTACTGTGTTGGCAAAAGATACTGTGGTGGCAAGAATGTCAAAGCTAGTTGAAGAGGCTCATAGCAGAAAATCTAGAGCACAAAGATTCATAGACCATTTTGCTAAGTACTATATTCCTGTGGTTGTCCTGATTTCAGCTGGCATTGCTGTGATTCCAGCTGCATTAAGAGTTCATGATGTTGGCCCTTGGATTCATCTAGCAATTGTGGTTTTATTGAGTGCATGCCCTTGTGCTCTCATCCTCTCCACACCTGTTGCAATCTTTTGTGCACTCACAAAAGCTGCAACAACTGGTTTACTGCTAAAAGGAGGAGATTATCTTGAAACTCTTTCTGGAGTTAAGACAGTGGCTTTTGATAAAACAGGCACAATAACAAGAGGAGAGTTCACTGTCACAGATTTTTGTGCTGTTGTGGATGATATTAGCATTGAAACCTTGTTGTACTGGGTTTCAAGTGTTGAGAGTAAATCAAGTCATCCTATGGCAGCTGCACTGGTGGAATATGGAATCTTGCACTCTATCAAACCACTCCCTGAGAATGTGGAGGATTTTCAGAATTTTCCTGGGGAAGGAGTTTTTGGTAAAATTGATGGGAAGGATATCTTTATAGGAAATAGGAGAATTGGTGTCAGAGCTGGTTGTGAAGATCCAATGTTTCAAATCAAAGAAGAAAGAAATGGTTATATTTTCTGTGGACCAACTCTGATTGGAGTATTCAGCCTAGCTGATACTTGCAGATCAGGTGCTTTGGAGGCAATTGAGCAGCTAAAGTCATTAGGTGTAAGATCAGTGATGCTCACAGGTGATAGCACTCAGGCTGCTAAGTATGTTGAGAATCAGTTGAACCATGCTCTAGACAATGTTCATGCAGAGCTTCTACCTGTTGAAAAGGCAGTGATTATTGAGAATTTGAAGAAAGAAGGGCCAATAGCCATGATCGGAGATGGCGTGAACGATGCTCCGGCTTTAGCTATAGCTGATATCGGTATCTCAATGGGGATATCTGGTTCAGCTCTTGCAATTGAGACAGGCAATGCAATCCTCATGTCGAATGACATCCGGAAAATACCGGAAGCCATTGAGTTAGCAAGAAAAACAACTAGGAAGCTCATTGAGAATGTCATTGTTTCAATTGGCACAAAGAGTGCTATACTAGCATTGGCAATTGCAGGGTATCCAATAATATGGCTTGCTGTGCTTACTGATGTTGGGACCTGTTTACTTGTGATTCTCAATAGCATGTTAATTTTACAAGACAAATCCAAACATGAAAAAGGGCCTAAAAGATCTAAATACAACACCTTCTCAGCAGATTTGACCAAAACTCTTGTGGACAAACAAAGGGATATTGAGGAGCAACAAGATCTTCTTAATGAAGTAAAGTGTGGTGATGAAAAAATGGTCAGTGGTGAAGTTCATGCAGTGAAATCTTGCAGTGATTGCTGCTTAGACAAAGCCAAAATGTGCGAAGACTCGTCGTCGCGCAGAGCAAATAATATCTCTTATTGTTGCCAGTTGCTAAACAAAGAAGTCCAAACCAAGACTGAAAAATGTTGCAGTGAATCTGTAACAATTGTAGCAGAAGATGCTATCTCAGAGTTGTCTGAGACAAGTGCAAGAACCAAGTGCTGCAAAAAAGGATGCTGTGATGATCATGTTAGTAATCTTGGCCTACAAGAAATTGTTATCAAGTGA	2508	0.4115	MVEKMKKSNFEVLGMCCATEAALVERIVKPLDGVKHFSVIVPTKTVTVVHDADLISESQIVSALNRARLEASLRVQGETNNEKKWPDLPTLACGLLLALSFFKYMYQPLDWFALGSVAIGFPRVLFRAIASIMALTLNINILVLLSVCATAALHDFWEAGVIIFLFSIAQWLETRATHKAMVSMSTLMSMAPQKAIVADTGEHVDVNDVKINTILAVKAGDAVPLDGVVVEGKCEVDEKMLTGEAFPVTKELDSVVWAGTINLNGYISVKTTVLAKDTVVARMSKLVEEAHSRKSRAQRFIDHFAKYYIPVVVLISAGIAVIPAALRVHDVGPWIHLAIVVLLSACPCALILSTPVAIFCALTKAATTGLLLKGGDYLETLSGVKTVAFDKTGTITRGEFTVTDFCAVVDDISIETLLYWVSSVESKSSHPMAAALVEYGILHSIKPLPENVEDFQNFPGEGVFGKIDGKDIFIGNRRIGVRAGCEDPMFQIKEERNGYIFCGPTLIGVFSLADTCRSGALEAIEQLKSLGVRSVMLTGDSTQAAKYVENQLNHALDNVHAELLPVEKAVIIENLKKEGPIAMIGDGVNDAPALAIADIGISMGISGSALAIETGNAILMSNDIRKIPEAIELARKTTRKLIENVIVSIGTKSAILALAIAGYPIIWLAVLTDVGTCLLVILNSMLILQDKSKHEKGPKRSKYNTFSADLTKTLVDKQRDIEEQQDLLNEVKCGDEKMVSGEVHAVKSCSDCCLDKAKMCEDSSSRRANNISYCCQLLNKEVQTKTEKCCSESVTIVAEDAISELSETSARTKCCKKGCCDDHVSNLGLQEIVIK*	836

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g1278	835	TIGRFAM	ATPase-IB_hvy: heavy metal translocating P-type ATPase	139	686	IPR027256	GO:0006812\|GO:0016021\|GO:0019829
	Aev04g1278	835	SUPERFAMILY	HMA, heavy metal-associated domain	3	73	IPR036163	GO:0046872
	Aev04g1278	835	PRINTS	Cadmium-transporting ATPase signature	253	269	IPR027256	GO:0006812\|GO:0016021\|GO:0019829
	Aev04g1278	835	PRINTS	Cadmium-transporting ATPase signature	174	194	IPR027256	GO:0006812\|GO:0016021\|GO:0019829
	Aev04g1278	835	PRINTS	Cadmium-transporting ATPase signature	21	42	IPR027256	GO:0006812\|GO:0016021\|GO:0019829
	Aev04g1278	835	PRINTS	Cadmium-transporting ATPase signature	10	19	IPR027256	GO:0006812\|GO:0016021\|GO:0019829
	Aev04g1278	835	PRINTS	Cadmium-transporting ATPase signature	272	286	IPR027256	GO:0006812\|GO:0016021\|GO:0019829
	Aev04g1278	835	PRINTS	P-type cation-transporting ATPase superfamily signature	508	519	-	-
	Aev04g1278	835	PRINTS	P-type cation-transporting ATPase superfamily signature	388	402	-	-
	Aev04g1278	835	PRINTS	P-type cation-transporting ATPase superfamily signature	237	251	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev04g1278	Aev-Chr4	8381053	8386914	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev04g1278	3	796	Primary Pumps ATPases	AT4G30110	55.860	0.0	897

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g1278	K01534		-	gmx:100815324	1199.88

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