Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1266 ATGGATGATACTGGGAAGAGAAAGCATGAGAAAGATACGGGAGGGGAGGAGGCGGCGAGGTACCGCGGCGTGAGGAGGAGGCCGTGGGGGAAGTACGGAGCAGAGATAAGGGACCCAACAAAGCCAACAGGAAGAGTGTGGTTAGGGACATTTGAGTCAGCTGAAGAAGCAGCTAGAGCTTATGATCGAGCTGCCATTGGTTTGAGGGGTGCTCTTGCAATTCTCAATTTCCCTGATGAGTATCATTCTCATCTCCCTTATATATCATCATCATCATATTATTCTTATTCTTCTTCTAATACTAATAACACCACCATTGGAGCAAGTAGTTCATGTTCCACTTCACGAGATGGTAGGGAAGTTATTGAGTTTGAGTATTTGGACAACAAGGTGTTGGAAGATCTTCTTGACCAAGAGAAGAATAGGTTCAAAGAATAA 438 0.4475 MDDTGKRKHEKDTGGEEAARYRGVRRRPWGKYGAEIRDPTKPTGRVWLGTFESAEEAARAYDRAAIGLRGALAILNFPDEYHSHLPYISSSSYYSYSSSNTNNTTIGASSSCSTSRDGREVIEFEYLDNKVLEDLLDQEKNRFKE* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1266 145 CDD AP2 19 79 IPR001471 GO:0003700|GO:0006355
Aev04g1266 145 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Aev04g1266 145 Coils Coil 129 145 - -
Aev04g1266 145 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Aev04g1266 145 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Aev04g1266 145 SUPERFAMILY DNA-binding domain 20 80 IPR016177 GO:0003677
Aev04g1266 145 Pfam AP2 domain 20 70 IPR001471 GO:0003700|GO:0006355
Aev04g1266 145 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Aev04g1266 145 PANTHER DNA-BINDING DOMAIN 3 140 IPR044808 GO:0003700|GO:0009873
Aev04g1266 145 MobiDBLite consensus disorder prediction 1 22 - -
Aev04g1266 145 PANTHER ETHYLENE RESPONSE FACTOR 3 140 - -
Aev04g1266 145 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1266 Aev-Chr4 8270706 8271143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1266 16 142 AP2-EREBP Transcription Factor Family AT3G23230 56.693 1.18e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev04g1266 AP2 2.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1266 - - adu:107483754 178.718