Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1259 ATGCAGATGACCTGTCAAACAAATGTTAATAGTGGTGATGTTCCTGTGTGTTCTACCTCTGGGAATATGTCACACCTGAATCAGTGTTTCAGTGGCTATGTACAACAGCCTGCCTTTGTGAGTGGATGGATGTATCTGAATGAACATGGGCAAATGTGTGGCCCATATATTCAGGAACAGTTATATGAGGGCTTAACTACTGGTTTCTTGCCATTTGAGCTTCCTGTATATCCTGTGATTAATGGCATAATAATGAACCCTGTACCATTGAATTATTTTAAGCAGTTTCCTGACCATGTTTCGAATGGGTTTGCATATTTGAGTCTGGGTATCTCAGGCTCAGGGATGCCTGCAAATTGCCCCTCCTCTTCTTCTGGCATGGCAGTATGTGGGCAACATAGATCTTTTGAGAATGCTGCTGCTCAGGCTGTCAACCCTGATTCACAGTCTGCTTTGAATTCACATGGCAATTACTGCATTAATGAATCTGATCGCCCGCACTCAGACTCAGAGGCGTTCAACAGTATAATATCTTCTCAGATGTTCAATGAAGAATGTTGTTGGCTTTATGAGGATGAAAGGGGCATGAAACGTGGTCCGCATTCAATTTCAGAATTGATTTCTTGGCACCATCATGGATATCTTCAAGATTCATCAGTGATCTCTCATTCTGGCAATAAGCATGGCCCCTTTACGCTACTGGCTGCTGTAAATGCACTGAAAGGAGATACTTCTGGAACTATTTGTAGATCAGGTTCCAAAAGCAATGAGCTAGGTGGTATTGTAAATTTAATTTGTGAAATATCTGAGGACATTTCTTCCCAATTGCACTTTGGTGTTATGAAAGCTGCTCGCAGAGTTGTGCTAGATGGGGTTATGAGCGATATTATTGCAGAATTTTTTACTGAGAAGAAACTCAGGAGGCAGAAGCTTGAACCAACCACTCAGGCTTCTGAGACTTGCATGGCTGACAGCAAAATGTCCAAGGTTGCTCTGGAAATGAGTAAAGATACTGCCGTTCCAAGTGAGCTTGCATCTTCCCATATTTCAGATGATCAGGCTTGCCGTGAAAGTTCCAGACCTTCAACAAGCATTAAATCAGTTGGAAGCGTTGAAAACTTTTGGTGGTCATATGCTGTTGTTCGTAAAGTGCTTGTTGATTATTGCAAGCAAGTGATGTGGAATGCTGTGTTTTTTGACAGTTTAACAGAGTACTTAAGTTCTTGGAGGAAGAAGAAACTTTGGTCTCCTTCGAAGCCTCAAATATCTGTTAATGGGTGTAGAGGTCATGTTGAAATGATTAAATCAAAAGCATTGCTTCTCAGGCCAGGTTCTTCTGAAGACCCTGCTAATGGCTGTAATCAGTTGGGAGTGATGGCAACGGAGATAGATTCTCGTTCTCAGTTATCCTCTTTATCTTCCAATGGCCCAAAGGATGGAAACTTACTAAAAGGTCAAAGAGTTTCGTGCACAAATAATAAATCTAAAGATTTGACAAACATTCTTGAAAGTGTGGAGAATGAGCTTCACTTGTCTTCAAAGTTGTCTTTAGCTGAATACATTCGAAATATTGTTGAAAAGGAAGTGGATGGAGTAACCCATTCTCAAGATGAAGACAAATTGAGTGAGGAAATTCTGAACGACAAGTCGGTGGCTACTGTAACAGCAGGGGATTCAGTTTGTGAGTCTTCATTTTCAAACCATATGTCTAATGTATTTGCAAATGCATTTAAGGAGTTGTATGGAGATGTAGATAGTGTAGTTGATGAAGAGGAAATCGGAGACCTTCCACCTGGATTTGAAGAGAATTCGCGCACAATTTTCTCACAATGCAGCTCTAACTTTCGACCTTCAAAATTAGTTGAATGTAATCCCAAGATTACAGAATATGTTGCAACTGCAATGTGCCGACAGAAGTTGCATGATGAAGTCTTAGAAGAGTGGAAGTCTTCATTCCTTGATTCTGCATTTAATAAACTTTTTAAGTCATCAAGTACCAAAAAGAAACATATTCACTCTGATGGACGTGTGAAAGGTAAAACGTTCAATGCAAGCAAGAAACATTTGAATGATGCTACTTCTGGACTGGTAAGAATGAAGGAAGGATCTAAAAATTCTTCTGGAGTTCCTCTCGTGAATGGAAAGTATACATACCACCGCAAGAAACTGTCACAGAAAGAACTGTGCTCCTCTCAATCTGTACCAGTAGATGATCATGGGTCAGGGAAGCAGCCTGTGGCTAAATTAAGAAAACATGTTTCCAGAGATTTTGATGAGACTTCAGAAGTTAAAGTATCTGCTGTTAAGCGTGGAAAAACTAGGGTGATTAATGGGAAGAAGGATAAATCTGCTGAGGACAGTTCTTGTCATGTCAATGTCAATGGTAGCTTGAATAGTCATCAATCATCCTTGAAGAATAAAACTCGTTCGAAAGCCTTGAAGCTTTCACATACTGTACAAAATTATGTTGGGGACGTTGTAAAATCTAATGAAAAGAGGGTTTCAACATCAACAGAAAATAGTGTTGGCAAGAAGAAGGCAGTTAAAAGCAATGGCTGTGATGGCACTGTTAAAGGGAAGACTGCAGGTCATTGCTCCAAAGAGAGACTAAATGCAACAAATAACGTATCAAAATCAAAAAGGAAACATCCAAAGGATGGTATGCCACCTTTACATCCTGCTAAGGTTTTGAAAATTTCAAATGATGGTGCAAAGGTAGGAGCGAGCAAACAGGCTACTCTTCCAAAGATGAATTCTGCCAAATCCAAGCCTCTGAATTCATGTCCTAGATCCGATGGATGTGCTAGGACTTCAATTGATGGATGTGAATGGCATAAATGGTCTCAAAATGCCAGTCCTGCATCTAGAGCACGTGTCAGGGGTCTTGCCTGGGTACAAAACAAGTCCGTAGATTCTGATAATAATTTATCTCAGCTGTCAAATAGTAAGGGTATTTCTGCCAGAACTAATAGGGCGAAATTGCGTAACCTTCTTGCTGCTGCGGAGGGTGCAGATCTTCTCAAAGTGCCTCAGTTGAAGGCAAGGAAAAAGCGTTTACGTTTTCAAAGGAGCAAGATACATGATTGGGGTCTTGTTGCCATGGAGCCAATAGAGGCAGAAGACTTTGTGATTGAGTATGTTGGGGAATTAATTCGTCCACAGATATCTGATATACGTGAACGTCAGTATGAGAAGATGGGAATAGGAAGCAGTTACCTTTTTAGACTTGATGATGGTTATGTGGTTGATGCTACAAAGAGAGGTGGGATTGCAAGATTTATTAACCATTCTTGTGAGCCTAACTGCTATACAAAGGTTATATCTGTTGAGGGTCAAAAGAAGATTTTCATATACGCCAAACGGCATATTGCTACTGGTGAAGAAATTTCATATAATTATAAGTTCCCCTTGGAGGATAAAAAGATCCCCTGCAACTGTGGCTCCAAAAAGTGTCGTGGATCACTGAATTAG 3471 0.4042 MQMTCQTNVNSGDVPVCSTSGNMSHLNQCFSGYVQQPAFVSGWMYLNEHGQMCGPYIQEQLYEGLTTGFLPFELPVYPVINGIIMNPVPLNYFKQFPDHVSNGFAYLSLGISGSGMPANCPSSSSGMAVCGQHRSFENAAAQAVNPDSQSALNSHGNYCINESDRPHSDSEAFNSIISSQMFNEECCWLYEDERGMKRGPHSISELISWHHHGYLQDSSVISHSGNKHGPFTLLAAVNALKGDTSGTICRSGSKSNELGGIVNLICEISEDISSQLHFGVMKAARRVVLDGVMSDIIAEFFTEKKLRRQKLEPTTQASETCMADSKMSKVALEMSKDTAVPSELASSHISDDQACRESSRPSTSIKSVGSVENFWWSYAVVRKVLVDYCKQVMWNAVFFDSLTEYLSSWRKKKLWSPSKPQISVNGCRGHVEMIKSKALLLRPGSSEDPANGCNQLGVMATEIDSRSQLSSLSSNGPKDGNLLKGQRVSCTNNKSKDLTNILESVENELHLSSKLSLAEYIRNIVEKEVDGVTHSQDEDKLSEEILNDKSVATVTAGDSVCESSFSNHMSNVFANAFKELYGDVDSVVDEEEIGDLPPGFEENSRTIFSQCSSNFRPSKLVECNPKITEYVATAMCRQKLHDEVLEEWKSSFLDSAFNKLFKSSSTKKKHIHSDGRVKGKTFNASKKHLNDATSGLVRMKEGSKNSSGVPLVNGKYTYHRKKLSQKELCSSQSVPVDDHGSGKQPVAKLRKHVSRDFDETSEVKVSAVKRGKTRVINGKKDKSAEDSSCHVNVNGSLNSHQSSLKNKTRSKALKLSHTVQNYVGDVVKSNEKRVSTSTENSVGKKKAVKSNGCDGTVKGKTAGHCSKERLNATNNVSKSKRKHPKDGMPPLHPAKVLKISNDGAKVGASKQATLPKMNSAKSKPLNSCPRSDGCARTSIDGCEWHKWSQNASPASRARVRGLAWVQNKSVDSDNNLSQLSNSKGISARTNRAKLRNLLAAAEGADLLKVPQLKARKKRLRFQRSKIHDWGLVAMEPIEAEDFVIEYVGELIRPQISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIATGEEISYNYKFPLEDKKIPCNCGSKKCRGSLN* 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1259 1156 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 2 1156 - -
Aev04g1259 1156 MobiDBLite consensus disorder prediction 788 804 - -
Aev04g1259 1156 MobiDBLite consensus disorder prediction 871 891 - -
Aev04g1259 1156 MobiDBLite consensus disorder prediction 779 804 - -
Aev04g1259 1156 CDD SET_SETD1 1005 1152 - -
Aev04g1259 1156 ProSiteProfiles Post-SET domain profile. 1140 1156 IPR003616 -
Aev04g1259 1156 SUPERFAMILY SET domain 1013 1153 IPR046341 -
Aev04g1259 1156 SMART set_7 1017 1140 IPR001214 GO:0005515
Aev04g1259 1156 SMART PostSET_3 1140 1156 IPR003616 -
Aev04g1259 1156 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 2 1156 IPR044570 GO:0042800|GO:0051568
Aev04g1259 1156 Pfam SET domain 1029 1133 IPR001214 GO:0005515
Aev04g1259 1156 ProSiteProfiles SET domain profile. 1017 1134 IPR001214 GO:0005515
Aev04g1259 1156 ProSiteProfiles GYF domain profile. 185 235 IPR003169 GO:0005515
Aev04g1259 1156 SUPERFAMILY GYF domain 180 238 IPR035445 -
Aev04g1259 1156 Gene3D - 175 253 IPR035445 -
Aev04g1259 1156 Gene3D SET domain 971 1156 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1259 Aev-Chr4 8173193 8180731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1259 1016 1156 C2H2 Transcription Factor Family AT2G23740 35.583 5.01e-18 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aev04g1259 SET 2.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1259 - - aip:107636228 1628.99