Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1247 ATGGCCTCAAATTCCATGGCTGGCTTCATCACTGGCTCTCATTCTCATGACTCTGATGAGCATCAGCCAATTAACCATCAAGCTTCATCGAAATCATGTCGAGTTTGTGGCGATGAGATTGGATATAAGGAAAATGGGGAGATGTTTGTGGCATGTCATGTGTGTGGATTCCCTGTTTGTCGACCCTGCTATGAGTATGAGAGGAGTGAAGGGAACCAGTCCTGCCCTCAATGCAATACTCGCTATAAGCGCCACAAAGGTTCTCCTAGAGTTGCTGGAGATGAAGAGGATAATTTTGATGCAGATGATTTTGATGATGAATTTCAGATTAAGAATCATCAAGATAATGCAGATATGCAACTTGCTGTTAATCATGTGGAAAATGGAGACTACAATCAACAGAAATTGCTGAGCAATGGTCAAGCTTTCTCTTCAGCAGGAAGTGTTGTTGGCAAGGATTTCGAAGCGGATAAAGAATTTTACAGCAATGAAGAATGGCAAGAAAGAGTAGAGAAATGGAAGGTGAGGCAAGAAAAGAAAGGTCTACTAAACAAAGAGGATGGGAAAGAAGACCAAGGTGAAGATGATGATTACCTTTTGGCTGAAGCTAGACAACCACTATGGCGCAAGGTTCCAATACCTTCAAGCCTAATCAACCCATACCGCATTGTCATCATCATGAGGCTTGTCATCCTAGCATTCTTCTTCCGTTTCCGGATCTTAACTCCGGCATACGACGCATACCCTTTGTGGCTCATCTCAGTCATATGTGAGATATGGTTTGCAATGTCATGGATTCTTGACCAGTTCCCTAAATGGTTCCCCATCACGCGCGAGACTTACTTGGACAGATTGTCCATAAGGTTCGAGCGTGAAGGGGAGCCTAATCAACTGTCCCCTGTTGATGTCTTTGTGAGTACTGTGGACCCTTTGAAGGAGCCACCAATCATAACAGCAAACACTGTTCTGTCAATCCTCTCTGTTGACTATCCTGTTGAGAAGGTTTGCTGCTATGTATCAGATGATGGTGCTTCTATGCTTTTGTTTGATTCATTGGCAGAAACTGCTGAGTTTGCAAGGAGATGGGTTCCTTTTTGCAAGAAGTACAACGTCGAGCCGAGGGCTCCTGAGTTCTATTTCTCTCAGAAGATTGATTACTTGAAGGACAAGGTTCAGCCTACGTTTGTGAAGGAGCGAAGGGCGATGAAGAGAGAATATGAAGAATTCAAAGTGAAGATTAATGCTTTGGTGGCAAAGGCTCAGAAGAAACCAGAGGACGGGTGGATGATGCAAGATGGAACTCCATGGCCCGGCAACAACACTCGAGATCATCCAGGAATGATTCAGGTATATTTGGGAAGTGCTGGTGCACTAGACGTGGAAGGCAAGGAACTGCCGCGACTCGTGTATATTTCCCGTGAAAAACGTCCCGGCTATCCACACCACAAGAAAGCAGGTGCCATGAATGCTTTGGTTCGAGTTTCTGCTGTGCTTACAAATGCACCCTTCATGTTGAATCTTGATTGTGATCACTACATCAACAATTGCAAGGCCTTAAGAGAAGCAATGTGCTTCTTGATGGATCCCCAGTTGGGGAAGAAGCTCTGCTATGTACAATTCCCACAAAGATTTGATGGTATTGATCGCCACGATCGATATGCTAATCGCAACACCGTGTTCTTTGATATCAATATGAAAGGGCTTGATGGGATTCAAGGTCCGGTATATGTCGGTACCGGAACTGTATTCAACAGGCAGGCATTGTATGGCTATGATCCACCAGTTTCTGAGAAAAGGCCAAAGATGACTTGTGATTGCTGGCCATCATGGTGCTGCTTTTGCTGCGGTTCAAGGAAGAAATCCAAGTCGAAAAAGAAATCAGGAAGAGGCCTATTTGGTGCATTATACACAAAGAAGAAGAAAATGATGGGGAAAGACTATGTTAGAAAAGGTTCTAGTTCCATGTTTGATCTTGAAGAGATTGAAGAAGGGCTTGAAGGCTATGAGGAGCTAGAGAAATCATCCCTCATGTCACAGAAAAACTTCGAGAAGCGGTTCGGGCAGTCGCCGGTTTTCATTGCTTCAACTTTGATGGAAAATGGAGGACTTCCTGAAGGCACTAACACTCAGTCATTGGTTAAGGAGGCCATTCATGTTATAAGCTGTGGCTATGAAGAGAAGACTGAATGGGGAAAAGAGATTGGGTGGATTTATGGCTCAGTGACAGAAGATATTTTGACTGGATTCAAGATGCACTGCAGAGGATGGAAATCAGTGTATTGTATGCCAAAGAGAGCAGCTTTCAAGGGATCTGCTCCAATAAATCTATCAGATCGGTTGCACCAAGTTCTTCGATGGGCTCTCGGTTCCGTCGAGATTTTCCTCAGCCGCCATTGTCCATTATGGTATGGCTATGGAGGAAAGCTCAAGTACCTTGAGAGGCTTGCTTACACTAACACCATAGTTTATCCTTTCACTTCCATCCCTCTGCTTGCATACTGCACAATTCCAGCTGTGTGTCTTCTAACCGGAAAGTTCATCATTCCAACTCTTACCAACCTTGCTAGTGTATGGTTCATGGCTCTATTTATCTCCATCATTTTAACCGGTGTCCTCGAGCTCCGATGGAGTGGCGTTACCATCGAAGACTTGTGGCGTAACGAGCAATTCTGGGTCATCGGAGGCGTTTCGGCTCACCTTTTCGCGGTGTTCCAAGGCCTGCTCAAAGTCCTAGCAGGAGTGGACACAAACTTCACAGTCACAGCAAAAGCAGCAGAGGATACCGAATTCGGAGAGCTCTATCTGTTCAAATGGACAACACTTCTAATCCCTCCAACAACTCTCATAATCCTCAACATTGTTGGAGTTGTTGCTGGTGTCTCTGATGCAATCAACAATGGATATGGATCATGGGGTCCTCTGTTTGGGAAGCTATTTTTCGCCTTTTGGGTCATTGTTCACTTATATCCCTTCCTCAAAGGTCTGATGGGAAAACAGAACAGAACTCCTACAATTGTAGTGCTCTGGTCGATTCTTCTTGCATCAATTTTCTCATTGATTTGGGTCAGAATTGATCCCTTCTTGCCCAAGCAAACTGGTCCAGTGCTCAAACAATGTGGGGTAGATTGCTAA 3132 0.446 MASNSMAGFITGSHSHDSDEHQPINHQASSKSCRVCGDEIGYKENGEMFVACHVCGFPVCRPCYEYERSEGNQSCPQCNTRYKRHKGSPRVAGDEEDNFDADDFDDEFQIKNHQDNADMQLAVNHVENGDYNQQKLLSNGQAFSSAGSVVGKDFEADKEFYSNEEWQERVEKWKVRQEKKGLLNKEDGKEDQGEDDDYLLAEARQPLWRKVPIPSSLINPYRIVIIMRLVILAFFFRFRILTPAYDAYPLWLISVICEIWFAMSWILDQFPKWFPITRETYLDRLSIRFEREGEPNQLSPVDVFVSTVDPLKEPPIITANTVLSILSVDYPVEKVCCYVSDDGASMLLFDSLAETAEFARRWVPFCKKYNVEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVKINALVAKAQKKPEDGWMMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPRLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNCKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCFCCGSRKKSKSKKKSGRGLFGALYTKKKKMMGKDYVRKGSSSMFDLEEIEEGLEGYEELEKSSLMSQKNFEKRFGQSPVFIASTLMENGGLPEGTNTQSLVKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVTIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAAEDTEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPVLKQCGVDC* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1247 1043 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 159 1043 - -
Aev04g1247 1043 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 20 117 - -
Aev04g1247 1043 Coils Coil 399 419 - -
Aev04g1247 1043 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 15 107 IPR013083 -
Aev04g1247 1043 SUPERFAMILY Nucleotide-diphospho-sugar transferases 314 847 IPR029044 -
Aev04g1247 1043 MobiDBLite consensus disorder prediction 1 26 - -
Aev04g1247 1043 CDD mRING-HC-C4C4_CesA_plant 31 81 - -
Aev04g1247 1043 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 440 592 IPR029044 -
Aev04g1247 1043 Pfam Zinc-binding RING-finger 26 98 IPR027934 -
Aev04g1247 1043 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 159 1043 - -
Aev04g1247 1043 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 20 117 - -
Aev04g1247 1043 Pfam Cellulose synthase 301 1036 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aev04g1247 1043 SUPERFAMILY RING/U-box 18 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1247 Aev-Chr4 8085528 8092839 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1247 7 1043 Cell Wall Biosynthesis AT5G17420 65.915 0.0 1427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1247 K10999 - gmx:100781996 1944.86