Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1234 ATGCAGACAAATACTGTGATGAGTGCTGGAAACAGGTCAAAAATGTATGAGCAGATTGGTTTCCTTGATCCCAACACAATGACAGAAGGTACAGTCTCACAAAAAATTATCTTTTCCCAAACACTGCCACAAGAACTATCATCAACACCACAACCACAAATGGTGAATTCCTCTTCCTACAACAACAATGTCCCTCCCTTTGAACCTTCCACTTGGGACTCAACCATTCATGAACTACAACAACAAGATGTTGGTTTTGCTATTAATCACCAAGAACATCAACAACCAAATAGTCAACAATTTCAGGTAGTAACTACTCATGATTTCACACTAGACCCTTCTTACCCTTCACAACATGATTTCCCCACAAACCAAATTCAGAACACACAAAACTTCCAACATTCCATGGAGCTTCTTGGTGAGTTTGAAACAATAGGACAAAACACAAACACCTCATGTGCATCCTCATCAGTACTTTTGAATGACCCTCTTTTGCAACTGAATCTGCCACAACAACAACAACAACATCCTCAAGCCATTAATGGTGGAGGGATATTCCAGTCTCTGCCACATGGGTTCCTGTTTGGTGGAGGGGATCATGAGATCATGGAAGGGAATGTTAATGGAGTTTTGTATCATGAAGAAGATGTGAAGAACCAGCTTGAACTTGACCTTGGATTGCTTGAATTCAACACATTTACTGGTTCTTTTGTTGCCAAAGGAAAAGGTTCCAAACATCTCCCAATTGAGAAACAGAGAAGAGAGCAATTGAATGGCAAGTTCAGATACTTGAGGAGTCTGATCCCAAATCCCACCAAGGTAGATAGAGCATCTGTGGTGGGAGATGCCATTGAGTACATAAGAGAACTGATTAGAACTGTGAATGAACTCAAGTTATTGGTGGAGAAGAAGAGAATTGGGAGAGAAAGGTGCAAGAGGCACAAAACTACTGAAGAAGAAGAAGATAATGAAGGTAACAAAAAGCCTTATGGTGAGAAGCCAGCAGATGAGTATATAAGAACCTCATGGCTTCAGAGAAAATCCAAAGAGAGTGAGGTTGATGTGAGGATAATTGATGATGAAGTTACAATCAAAATGGTTCAGAGGAAGAACATTAACTTCTCTCTGCTCTTTCTCACCAAGCTTCTTGATGAACTTCACTTGGATCTTCACCATCTTGCAGGTGGCCATGTTGGAGAATTTTGCACCTTCTTCTTCAATACCAAGTTCAAAGGGTTTCGCCACAATGGCTTCTTGTGGGGACCACCCTTCTCACTTGGCTCTGAAAACAGAGCTCGACCCATTAAAGCTTCGGTTGATGCACCCCCATTTCCATTGTTTCAGCCTCCAAAAGTTGAAGAGGATTCCTCTGAGTTGGAGCCTGCAGATCCTGATTTCTACAGGATAGGCTATGTTAGGAGCATGAGAGCTTATGGAATCGAGTTTAAAGAAGGGCCGGATGGATTTGGTGTGTATGCTTCCAAAGATGTACAACCTCTTCGCCGACCAAGGGTTATAATGGAAATTCCCCTTGAATTGATGTTAACCATCAGACAGAAACTCCCATGGATGTTTTTCCCTGATATAATTCCAATAGGCCATCCGATATTTGATATTATCAACTCGACTAATCCGGAGACAGATTGGGACTTAAGGTTAGCTTGTCTCCTCTTATTTTCGTTCGATTGCGAAGAGAACTTTTGGCAGTTGTACGGTGACTTCTTACCAAGTGCTGATGAGTGCACTAGCTTACTTCTTGCTACAGAGGAGGAGCTTTCAGAGCTGCAAGATCCTGATCTTGCTTCTACTATGAGAATCCAGCAACAACGAGCCTTAGAATTCTGGGAAAAGAACTGGCACAGTGCTGCACCCCTTAAAATAAAGCGTCTTGCTCGTGATCCTCGAAGGTTCATGTGGGCCGTGGGTATTGCACAATCACGATGTATCAACATGCAAGTGAGAATTGGTGCACTGACACAAGATTCAAATATGCTAATTCCTTATGCTGACATGCTAAACCATTCGTTTGAGCCAAATTGTTTTTTGCATTGGCGTTTTAAGGACCGGATGCTTGAGGTGCTTATCAATGCTGGTCAGGAGATTAAAAAGGGAGATGAGATGACAATTGGTTACATGGATGGACAGAATGACATGCTAATGCAGAGATATGGATTTTCATCGCCTGTGAATCCTTGGGATGTGATCAAATTCTCAGGCAATTCTCGCATTCATCTGGATTCCTTCTTGTCAGTCTTTAATATATCTGGCCTTCCCGAAGAATATTATCATAACAGTTGTTTATCAAATGCCGATGATACATTTGTTGATGGAGCAGTCATAGCTGCGGCACGAACATTGCCAACATGGTCAGACAGAGATGTGCCTCCAATCCCAAGTGTGGAAAGAAAGGCTGTGAAGGAGTTACAAGCAGAATGCCAAAAGATGCTTGCAGCATACCCTACAACCTCTAAGCAAGATCAGAAACTGCTAGATTCCTCACCAAACGCTCCACGGACGCTCGAGGCTGCAATAAAAACCATCACAACAACAATGGGGGCTGCAGAATCATCAGCATCAGCATCAGAACCATTGCCATCACCAACAGCCAAAGTTTCGAGCATTTTCGTGTACCCCATCAAGTCATGCCGTGGAATTTCGCTTTCTCATGCTCCCCTCACTCATTCTGGGTTTCGATGGGATCGACAGTGGTTGGTGGTTAATTCCATAGGGAGGGCATACACCCAAAGAGTTGAGCCAAAGCTTGCTTTGGTTCAAGCTGAACTTCCAACTGAGGCTTTTGATGAAGGGTGGGAACCCACCGATGATTCCTTTATGGTGTTGAAAGCACCTGGGATGGAACCTCTCAAAGTTTGTTTGAGTAAACCACATGAAATAGCAGATGGTGTCTCGGTATGGGAATGGAGTGGATCTGCTTGGGATGAGGGAGCTGAAGCAGCCCGGTGGTTCTCAGATTATTTGGAAAAACCGAGTCGATTGGTCCGGTTCAATACCGATTCGCAAGTTAGACCAGTAGATCCTGATTATGCTGAAGGTCATCTAACCCTGTTTTCCGATGGTTTTCCATTCTTACTCGCATCTCAGGAATCATTGGATGCAGTAAACCAACATCTTGAGGAGCCCATATCTATCAATCGTTTTAGAGCCAATATCATTGTTGAAGGTTGTGAACCGTTTGCTGAGGACTTATGGACAGATATCAAGATAAGCAGGTTATCATTTCAAGGTGTGAAGCTGTGTGCTCGTTGTAAGGTACCTTCAATCAATCAAGAGACTGGAATTGATGGACCTGAACCAAATCAAACCCTAATGAAAATTAGGTCTGGCAAAGTCTTAAGGCCAAATGGTAAACACCAAAACAAGACATACTTTGGTCAGAATATGGTCTGGAACTGGAAGGAATCTTCTGCAAAAGGGAATGGAAACATCATCAATGTGGGTGATCCTGTTTATGTCTTCAAAAGGGTCTCTTCATTTGCTGAAGCAGCTGCTTGA 3513 0.4293 MQTNTVMSAGNRSKMYEQIGFLDPNTMTEGTVSQKIIFSQTLPQELSSTPQPQMVNSSSYNNNVPPFEPSTWDSTIHELQQQDVGFAINHQEHQQPNSQQFQVVTTHDFTLDPSYPSQHDFPTNQIQNTQNFQHSMELLGEFETIGQNTNTSCASSSVLLNDPLLQLNLPQQQQQHPQAINGGGIFQSLPHGFLFGGGDHEIMEGNVNGVLYHEEDVKNQLELDLGLLEFNTFTGSFVAKGKGSKHLPIEKQRREQLNGKFRYLRSLIPNPTKVDRASVVGDAIEYIRELIRTVNELKLLVEKKRIGRERCKRHKTTEEEEDNEGNKKPYGEKPADEYIRTSWLQRKSKESEVDVRIIDDEVTIKMVQRKNINFSLLFLTKLLDELHLDLHHLAGGHVGEFCTFFFNTKFKGFRHNGFLWGPPFSLGSENRARPIKASVDAPPFPLFQPPKVEEDSSELEPADPDFYRIGYVRSMRAYGIEFKEGPDGFGVYASKDVQPLRRPRVIMEIPLELMLTIRQKLPWMFFPDIIPIGHPIFDIINSTNPETDWDLRLACLLLFSFDCEENFWQLYGDFLPSADECTSLLLATEEELSELQDPDLASTMRIQQQRALEFWEKNWHSAAPLKIKRLARDPRRFMWAVGIAQSRCINMQVRIGALTQDSNMLIPYADMLNHSFEPNCFLHWRFKDRMLEVLINAGQEIKKGDEMTIGYMDGQNDMLMQRYGFSSPVNPWDVIKFSGNSRIHLDSFLSVFNISGLPEEYYHNSCLSNADDTFVDGAVIAAARTLPTWSDRDVPPIPSVERKAVKELQAECQKMLAAYPTTSKQDQKLLDSSPNAPRTLEAAIKTITTTMGAAESSASASEPLPSPTAKVSSIFVYPIKSCRGISLSHAPLTHSGFRWDRQWLVVNSIGRAYTQRVEPKLALVQAELPTEAFDEGWEPTDDSFMVLKAPGMEPLKVCLSKPHEIADGVSVWEWSGSAWDEGAEAARWFSDYLEKPSRLVRFNTDSQVRPVDPDYAEGHLTLFSDGFPFLLASQESLDAVNQHLEEPISINRFRANIIVEGCEPFAEDLWTDIKISRLSFQGVKLCARCKVPSINQETGIDGPEPNQTLMKIRSGKVLRPNGKHQNKTYFGQNMVWNWKESSAKGNGNIINVGDPVYVFKRVSSFAEAAA* 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1234 1170 Gene3D - 240 314 IPR036638 GO:0046983
Aev04g1234 1170 Gene3D set domain protein methyltransferase, domain 1 472 725 - -
Aev04g1234 1170 Pfam Helix-loop-helix DNA-binding domain 245 290 IPR011598 GO:0046983
Aev04g1234 1170 ProSiteProfiles MOSC domain profile. 997 1159 IPR005302 GO:0003824|GO:0030151|GO:0030170
Aev04g1234 1170 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 435 841 - -
Aev04g1234 1170 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 722 845 IPR036464 -
Aev04g1234 1170 SMART finulus 247 296 IPR011598 GO:0046983
Aev04g1234 1170 CDD SET_LSMT 479 725 - -
Aev04g1234 1170 Pfam SET domain 488 711 IPR001214 GO:0005515
Aev04g1234 1170 MobiDBLite consensus disorder prediction 313 333 - -
Aev04g1234 1170 Pfam MOSC N-terminal beta barrel domain 869 996 IPR005303 -
Aev04g1234 1170 Gene3D - 754 849 IPR036464 -
Aev04g1234 1170 ProSiteProfiles SET domain profile. 467 712 IPR001214 GO:0005515
Aev04g1234 1170 SUPERFAMILY PK beta-barrel domain-like 866 1100 IPR011037 -
Aev04g1234 1170 Pfam MOSC domain 1022 1156 IPR005302 GO:0003824|GO:0030151|GO:0030170
Aev04g1234 1170 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 241 290 IPR011598 GO:0046983
Aev04g1234 1170 SUPERFAMILY SET domain 487 726 IPR046341 -
Aev04g1234 1170 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 14 435 841 - -
Aev04g1234 1170 CDD bHLH_AtMYC1_like 246 310 IPR045896 -
Aev04g1234 1170 SUPERFAMILY MOSC N-terminal domain-like 871 1011 - -
Aev04g1234 1170 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 243 306 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1234 Aev-Chr4 7990013 8007821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1234 156 410 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31220 45.620 2.33e-56 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aev04g1234 SET 1.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1234 - - gmx:100786962 759.214