Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1233 ATGAGTTCTTCAAATGGAGGAAAAGGTGGCTCTGGCGACAAGCACAACAACCAGAACAAGGGGAAATCATCATCCTCTGGAATCACTTCAGACCAGAAAGCTCGTTTGGAAATGTTTTTTGAGCGGCTGCCACACCCAAATAAAACCCAAGAAGATCAATTAGCAAGGTTTCTAGGGCTTCAAGGAGAACAAGTAGCAAAGTGGTTTCATGAAAGAAGAACACAACAGGTTTCACAACCTAAGCCGATTTTTCCTACACTCAACACTTCACGTGATCTCCAATTTCATGAAGTTCCAAACTCGTCAAGATCACCGACCCCGAGTGTTGATTCAGATGAAGATGATGATGATATTCGTATGGAGAAAGCAAGGATGTTGGAGATTGCAAAGGGTGCCCATGAAGAGTTGTGTAAGCTCTTACAAGAGAATGAGCCTCTATGGGTCAGGGCTTCCTCACAAGATAGGAGAAGGGTTCTTGATGACACAAAATATAAGACCATGTTTCCTAGGGACAGTGATCCTAATGTCTTCAAAACACCTTATACACGTAAGGAATCTTCCAAAGCTTCAATGATAGTGGACATGACTAATGCAATGGAGATGGTTGAAGCCTTCTTGGATCCGAAAGAAATGACTGAATTCTTCCCAACAATGATTCAAAGAGCAGAGATAATAAAGGAGTATGAACATGGAGAAGATGGAACTAAACATGGAGCCTTGTTGCTGATGTATTTAGAAACCCACCATCTATCACATCTAGTGCCACCAAGGAAGTACTTCTTCCTTCGATACTGTGAAAAAGTTCATGAATGTGGGATGTGGGTGATATGTGATGTGTCACTTGACTCCTTCGGATCCAACCTTCCTCATTTACCTTGTTGGAAGCTTCCATCTGGATGCCTAATTTATCAAATGCCTACTCATAGTACAAGAAATAATGCTATCATGGTTAAATGGATAGAACATGTGGAAGTGAATGATATGCCCCAAACAAGTTTGCTATATGGAGATCTGGTTGCAAATAATATTCCATATTCAGCTGATAGGTGGGTTAGGGTCCTTCAAAGGAACGCTGAGAAACTCTATTACGCCAAAACCTCACCTAATGAAGCTGATGAAGTAATCAAAATTGAAGGAAGGAGGAGTTTGCTACACATTTCTCACAGAATGCTTCAGAGCTTTTGTGAAATTCTGAACATGTCTTGCAAGCCTCAAATCACACATTTCAACAAGACAAGGAATGATAATAATAATGATTTTGAGATTAAGTACTCTGTTCGCAAGAATTCTGCACAAGACCATCCAACGGGCATGATTGCAAGCCTTGCTACCTCCTTTTGGATTCCTCACAATTTTTATCATGTCTTTCACTTTCTCACAGATGCAACTAAGCGAAATCAGTGGGATCCTCTGTGTGGGGGACATTCTGCGTTTGAGGTTGCATCAATTGAAACTGGACGCTATGATGGCAACCGTCTTTCAATTATTCGGCCTCAGGCTGAGGATCCAGAAGAACAGAAGGGGATGGTAATTCTTGAAGAAAGTTCGATAGACAGTGTAGCAGCGTACATAGTGTCTGCACCGATTGAGAGGAAGAAGATGCAGAGGGTGATGGCAGGGAGGGACGACTCTGTTTCGTGGCAGCTGCCAATTCTGCCCTCAGGCTTCGTCCTCACCAAAGATGCCCATTTATTCAGCAGAGCCGTTATGCCTAATCAACAAGGTGGCACTCTCCTAACCATGGCTTCTCAGATACTTGTTTCTACTACACCATCGACCAAAGAGTTGAACATGAAAGATTTGGAGATTGCGAATAACATTTTCCGCACTATGGTTAATAATGTTAAGGCTGCTCTTGATTGTTCCGGTATGAATTAA 1878 0.4212 MSSSNGGKGGSGDKHNNQNKGKSSSSGITSDQKARLEMFFERLPHPNKTQEDQLARFLGLQGEQVAKWFHERRTQQVSQPKPIFPTLNTSRDLQFHEVPNSSRSPTPSVDSDEDDDDIRMEKARMLEIAKGAHEELCKLLQENEPLWVRASSQDRRRVLDDTKYKTMFPRDSDPNVFKTPYTRKESSKASMIVDMTNAMEMVEAFLDPKEMTEFFPTMIQRAEIIKEYEHGEDGTKHGALLLMYLETHHLSHLVPPRKYFFLRYCEKVHECGMWVICDVSLDSFGSNLPHLPCWKLPSGCLIYQMPTHSTRNNAIMVKWIEHVEVNDMPQTSLLYGDLVANNIPYSADRWVRVLQRNAEKLYYAKTSPNEADEVIKIEGRRSLLHISHRMLQSFCEILNMSCKPQITHFNKTRNDNNNDFEIKYSVRKNSAQDHPTGMIASLATSFWIPHNFYHVFHFLTDATKRNQWDPLCGGHSAFEVASIETGRYDGNRLSIIRPQAEDPEEQKGMVILEESSIDSVAAYIVSAPIERKKMQRVMAGRDDSVSWQLPILPSGFVLTKDAHLFSRAVMPNQQGGTLLTMASQILVSTTPSTKELNMKDLEIANNIFRTMVNNVKAALDCSGMN* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1233 625 SUPERFAMILY Bet v1-like 379 588 - -
Aev04g1233 625 Gene3D - 9 82 - -
Aev04g1233 625 SUPERFAMILY Homeodomain-like 10 75 IPR009057 -
Aev04g1233 625 SMART START_1 127 360 IPR002913 GO:0008289
Aev04g1233 625 MobiDBLite consensus disorder prediction 96 115 - -
Aev04g1233 625 Pfam START domain 129 360 IPR002913 GO:0008289
Aev04g1233 625 MobiDBLite consensus disorder prediction 1 38 - -
Aev04g1233 625 ProSiteProfiles 'Homeobox' domain profile. 19 79 IPR001356 GO:0003677
Aev04g1233 625 Pfam Homeodomain 28 75 IPR001356 GO:0003677
Aev04g1233 625 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 17 620 IPR042160 -
Aev04g1233 625 SUPERFAMILY Bet v1-like 120 361 - -
Aev04g1233 625 CDD homeodomain 28 76 IPR001356 GO:0003677
Aev04g1233 625 Gene3D - 127 336 IPR023393 -
Aev04g1233 625 MobiDBLite consensus disorder prediction 1 32 - -
Aev04g1233 625 ProSiteProfiles START domain profile. 118 363 IPR002913 GO:0008289
Aev04g1233 625 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 17 620 - -
Aev04g1233 625 SMART HOX_1 18 83 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1233 Aev-Chr4 7978714 7984480 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1233 29 79 Homeobox Transcription Factor Family AT1G73360 47.059 2.43e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev04g1233 START 1.5e-19 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1233 K09338 - aprc:113852280 369.392